[Isis-fish-commits] r2230 - in isis-fish/trunk/src/test/java/fr/ifremer: . isisfish isisfish/datastore isisfish/entity isisfish/logging isisfish/logging/io isisfish/mexico isisfish/simulator isisfish/simulator/launcher isisfish/simulator/sensitivity isisfish/ui/sensitivity isisfish/ui/widget/filter isisfish/util isisfish/vcs

14 May 2009

Author: chatellier
Date: 2009-05-14 18:09:22 +0000 (Thu, 14 May 2009)
New Revision: 2230

Added:
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/AbstractIsisFishTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/DataStorageTestHelper.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/entity/PersistenceTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/LoggerHelper.java
Removed:
   isis-fish/trunk/src/test/java/fr/ifremer/TestUtils.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/PersistenceTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/TestUtil.java
Modified:
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/AnalysePlanStorageTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/ExportStorageTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/FormuleStorageTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/RuleStorageTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/ScriptStorageTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/SensitivityStorageTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/SimulatorStorageTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/entity/PopulationSeasonInfoTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/SimulationLoggerUtilTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/io/LineReaderTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/io/LineReaderUtilTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/mexico/MexicoHelperTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/SimulationHelperTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/SimulationParameterTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/SimulationPreScriptTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/launcher/SimulationServiceTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/launcher/SshSimulatorLauncherTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/sensitivity/FactorTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/sensitivity/SensitivityCalculatorRandomMock.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/ui/sensitivity/FactorTreeModelTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/ui/widget/filter/FilterDialogModelMock.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/util/CompileHelperTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/util/EvaluateHelperTest.java
   isis-fish/trunk/src/test/java/fr/ifremer/isisfish/vcs/VCSSVNTest.java
Log:
Refactor all tests.
Now all test must inherit abtract test that build a test environment with a proper isolated database.

Deleted: isis-fish/trunk/src/test/java/fr/ifremer/TestUtils.java
===================================================================

--- isis-fish/trunk/src/test/java/fr/ifremer/TestUtils.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/TestUtils.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -1,133 +0,0 @@
-/* *##%
- * Copyright (C) 2009 Code Lutin
- *
- * This program is free software; you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation; either version 2
- * of the License, or (at your option) any later version.
- *
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
- * GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.
- *##%*/
-
-package fr.ifremer;
-
-import java.io.File;
-import java.io.FileFilter;
-
-import org.apache.commons.io.FileUtils;
-import org.codelutin.util.FileUtil;
-
-import fr.ifremer.isisfish.IsisFish;
-import fr.ifremer.isisfish.util.ClasspathTemplateLoader;
-import freemarker.cache.TemplateLoader;
-import freemarker.ext.beans.BeansWrapper;
-import freemarker.template.Configuration;
-
-/**
- * Une classe pour avoir des choses utiles pour tous les tests d'isis
- *
- * @author chemit
- * @version $Revision$
- *
- * Last update: $Date$
- * by : $Author$
- */
-public abstract class TestUtils {
-
-    protected static File basedir;
-
-    protected static File targetdir;
-
-    protected static File dirDatabase;
-    
-    public static File getBasedir() {
-        if (basedir == null) {
-            String base = System.getProperty("basedir");
-            if (base == null || base.isEmpty()) {
-                base = new File("").getAbsolutePath();
-            }
-            basedir = new File(base);
-            //System.out.println("basedir for test " + basedir);
-        }
-        return basedir;
-    }
-
-    public static File getTargetdir() {
-        if (targetdir == null) {
-            targetdir = new File(getBasedir(), "target");
-            //System.out.println("targetdir for test " + targetdir);
-        }
-        return targetdir;
-    }
-    
-    /**
-     * Toujours appeler cette method pour les test d'isis.
-     * (sinon,il ira ecrire dans le isis-database-3 officiel).
-     * 
-     * Create a temp dir and init isis with that temp dir as database.
-     * 
-     * @throws Exception
-     */
-    public static void init() throws Exception {
-        
-        File mavenTestDir = new File(getTargetdir() + File.separator + "surefire-workdir");
-        dirDatabase = FileUtil.createTempDirectory("isisdbtest", "", mavenTestDir);
-        
-        System.setProperty("database.directory", dirDatabase.getAbsolutePath());
-        System.setProperty("launch.ui", "false");
-        System.setProperty("user.home", dirDatabase.getAbsolutePath());
-
-        IsisFish.init();
-        IsisFish.initVCS();
-
-        FileUtils.copyDirectory(new File("src/test/resources/test-database"), dirDatabase, new FileFilter() {
-            @Override
-            public boolean accept(File pathname) {
-                boolean result = true;
-                if(pathname.getAbsolutePath().indexOf(File.separator + ".svn") != -1) {
-                    result = false;
-                }
-                return result;
-            }
-        });
-    }
-    
-    /**
-     * Delete created temp directory.
-     */
-    public static void clean() {
-        System.setProperty("user.home", "");
-        if(dirDatabase != null) {
-            FileUtil.deleteRecursively(dirDatabase);
-            dirDatabase = null;
-        }
-    }
-    
-    /**
-     * Return common script freemarker configuration.
-     * 
-     * @return freemarker {@link Configuration}
-     */
-    public static Configuration getFreemarkerConfiguration() {
-        Configuration freemarkerConfiguration = new Configuration();
-
-        // needed to overwrite "Defaults to default system encoding."
-        // fix encoding issue on some systems
-        freemarkerConfiguration.setDefaultEncoding("utf-8");
-
-        // specific template loader to get template from jars (classpath)
-        TemplateLoader templateLoader = new ClasspathTemplateLoader();
-        freemarkerConfiguration.setTemplateLoader(templateLoader);
-
-        freemarkerConfiguration.setObjectWrapper(new BeansWrapper());
-        
-        return freemarkerConfiguration;
-    }
-}

Added: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/AbstractIsisFishTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/AbstractIsisFishTest.java	                        (rev 0)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/AbstractIsisFishTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -0,0 +1,149 @@
+/* *##%
+ * Copyright (C) 2009 Code Lutin
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 2
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.
+ *##%*/
+
+package fr.ifremer.isisfish;
+
+import java.io.File;
+import java.io.FileFilter;
+
+import org.apache.commons.io.FileUtils;
+import org.codelutin.util.FileUtil;
+import org.junit.AfterClass;
+import org.junit.BeforeClass;
+
+import fr.ifremer.isisfish.util.ClasspathTemplateLoader;
+import freemarker.cache.TemplateLoader;
+import freemarker.ext.beans.BeansWrapper;
+import freemarker.template.Configuration;
+
+/**
+ * Abtract test case for isis fish.
+ * 
+ * Contains BeforeClass and AfterClass method to proper init cases.
+ *
+ * @author chatellier
+ * @version $Revision: 1.0 $
+ * 
+ * Last update : $Date: 14 mai 2009 $
+ * By : $Author: chatellier $
+ */
+public abstract class AbstractIsisFishTest {
+
+    protected static File basedir;
+
+    protected static File targetdir;
+
+    protected static File dirDatabase;
+
+    protected static File getBasedir() {
+        if (basedir == null) {
+            String base = System.getProperty("basedir");
+            if (base == null || base.isEmpty()) {
+                base = new File("").getAbsolutePath();
+            }
+            basedir = new File(base);
+        }
+        return basedir;
+    }
+
+    protected static File getTargetdir() {
+        if (targetdir == null) {
+            targetdir = new File(getBasedir(), "target");
+        }
+        return targetdir;
+    }
+
+    /**
+     * Toujours appeler cette method pour les test d'isis.
+     * (sinon,il ira ecrire dans le isis-database-3 officiel).
+     * 
+     * Create a temp dir and init isis with that temp dir as database.
+     * 
+     * @throws Exception
+     */
+    @BeforeClass
+    public static void init() throws Exception {
+
+        File mavenTestDir = new File(getTargetdir() + File.separator + "surefire-workdir");
+        dirDatabase = FileUtil.createTempDirectory("isisdbtest", "", mavenTestDir);
+
+        System.setProperty("user.home", dirDatabase.getAbsolutePath());
+        System.setProperty(IsisConfig.Option.LAUNCH_UI.key, "false");
+        System.setProperty(IsisConfig.Option.DATABASE_DIRECTORY.key, dirDatabase.getAbsolutePath());
+        System.setProperty(IsisConfig.Option.SSH_KEY_FILE.key, dirDatabase.getAbsolutePath() + File.separator + "ssh" + File.separator + "isis_test_dsa");
+        System.setProperty(IsisConfig.Option.VCS_SSH_KEY_FILE.key, dirDatabase.getAbsolutePath() + File.separator + "ssh" + File.separator + "isis_test_rsa");
+
+        IsisFish.init();
+        IsisFish.initVCS();
+
+        FileUtils.copyDirectory(new File("src/test/resources/test-database"),
+            dirDatabase, new FileFilter() {
+                @Override
+                public boolean accept(File pathname) {
+                    boolean result = true;
+                    if (pathname.getAbsolutePath().indexOf(
+                            File.separator + ".svn") != -1) {
+                        result = false;
+                    }
+                    return result;
+                }
+            });
+    }
+    
+    /**
+     * Return current database directory.
+     * 
+     * @return current database directory
+     */
+    protected static File getCurrentDatabaseDirectory() {
+        return dirDatabase;
+    }
+
+    /**
+     * Delete created temp directory.
+     */
+    @AfterClass
+    public static void clean() {
+        System.clearProperty("user.home");
+        if (dirDatabase != null) {
+            FileUtil.deleteRecursively(dirDatabase);
+            dirDatabase = null;
+        }
+    }
+
+    /**
+     * Return common script freemarker configuration.
+     * 
+     * @return freemarker {@link Configuration}
+     */
+    protected static Configuration getFreemarkerConfiguration() {
+        Configuration freemarkerConfiguration = new Configuration();
+
+        // needed to overwrite "Defaults to default system encoding."
+        // fix encoding issue on some systems
+        freemarkerConfiguration.setDefaultEncoding("utf-8");
+
+        // specific template loader to get template from jars (classpath)
+        TemplateLoader templateLoader = new ClasspathTemplateLoader();
+        freemarkerConfiguration.setTemplateLoader(templateLoader);
+
+        freemarkerConfiguration.setObjectWrapper(new BeansWrapper());
+
+        return freemarkerConfiguration;
+    }
+}

Deleted: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/PersistenceTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/PersistenceTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/PersistenceTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -1,770 +0,0 @@
-/* *##%
-* Copyright (C) 2002, 2009 Code Lutin, Cédric Pineau, Benjamin Poussin
-*
-* This program is free software; you can redistribute it and/or
-* modify it under the terms of the GNU General Public License
-* as published by the Free Software Foundation; either version 2
-* of the License, or (at your option) any later version.
-*
-* This program is distributed in the hope that it will be useful,
-* but WITHOUT ANY WARRANTY; without even the implied warranty of
-* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-* GNU General Public License for more details.
-*
-* You should have received a copy of the GNU General Public License
-* along with this program; if not, write to the Free Software
-* Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.
-*##%*/
-
-package fr.ifremer.isisfish;
-
-import java.util.Collection;
-
-import org.apache.commons.logging.Log;
-import org.apache.commons.logging.LogFactory;
-import org.codelutin.topia.TopiaContext;
-import org.junit.After;
-import org.junit.AfterClass;
-import org.junit.Before;
-import org.junit.BeforeClass;
-import org.junit.Test;
-
-import fr.ifremer.TestUtils;
-import fr.ifremer.isisfish.datastore.RegionStorage;
-import fr.ifremer.isisfish.entities.Cell;
-import fr.ifremer.isisfish.entities.CellDAO;
-import fr.ifremer.isisfish.entities.EffortDescription;
-import fr.ifremer.isisfish.entities.EffortDescriptionDAO;
-import fr.ifremer.isisfish.entities.FisheryRegion;
-import fr.ifremer.isisfish.entities.FisheryRegionDAO;
-import fr.ifremer.isisfish.entities.Gear;
-import fr.ifremer.isisfish.entities.GearDAO;
-import fr.ifremer.isisfish.entities.Metier;
-import fr.ifremer.isisfish.entities.MetierDAO;
-import fr.ifremer.isisfish.entities.MetierSeasonInfo;
-import fr.ifremer.isisfish.entities.MetierSeasonInfoDAO;
-import fr.ifremer.isisfish.entities.Population;
-import fr.ifremer.isisfish.entities.PopulationDAO;
-import fr.ifremer.isisfish.entities.PopulationGroup;
-import fr.ifremer.isisfish.entities.PopulationGroupDAO;
-import fr.ifremer.isisfish.entities.PopulationSeasonInfo;
-import fr.ifremer.isisfish.entities.PopulationSeasonInfoDAO;
-import fr.ifremer.isisfish.entities.Port;
-import fr.ifremer.isisfish.entities.PortDAO;
-import fr.ifremer.isisfish.entities.Result;
-import fr.ifremer.isisfish.entities.ResultDAO;
-import fr.ifremer.isisfish.entities.Season;
-import fr.ifremer.isisfish.entities.SeasonDAO;
-import fr.ifremer.isisfish.entities.Selectivity;
-import fr.ifremer.isisfish.entities.SelectivityDAO;
-import fr.ifremer.isisfish.entities.SetOfVessels;
-import fr.ifremer.isisfish.entities.SetOfVesselsDAO;
-import fr.ifremer.isisfish.entities.Species;
-import fr.ifremer.isisfish.entities.SpeciesDAO;
-import fr.ifremer.isisfish.entities.Strategy;
-import fr.ifremer.isisfish.entities.StrategyDAO;
-import fr.ifremer.isisfish.entities.StrategyMonthInfo;
-import fr.ifremer.isisfish.entities.StrategyMonthInfoDAO;
-import fr.ifremer.isisfish.entities.TargetSpecies;
-import fr.ifremer.isisfish.entities.TargetSpeciesDAO;
-import fr.ifremer.isisfish.entities.TripType;
-import fr.ifremer.isisfish.entities.TripTypeDAO;
-import fr.ifremer.isisfish.entities.VesselType;
-import fr.ifremer.isisfish.entities.VesselTypeDAO;
-import fr.ifremer.isisfish.entities.Zone;
-import fr.ifremer.isisfish.entities.ZoneDAO;
-
-/**
- * PersistenceTest.
- *
- * Created: 3 août 2004
- *
- * @author Benjamin Poussin <poussin at codelutin.com>
- * @version $Revision$
- *
- * Mise a jour: $Date$
- * par : $Author$
- */
-public class PersistenceTest {
-
-    /**
-     * Logger for this class
-     */
-    private static final Log log = LogFactory.getLog(PersistenceTest.class);
-    
-    // Persistence
-    protected TopiaContext context = null;
-    protected RegionStorage rs;
-    
-    @BeforeClass
-    public static void init() throws Exception {
-        TestUtils.init();
-    }
-    
-    @AfterClass
-    public static void clean() {
-        TestUtils.clean();
-    }
-    
-    @Before
-    public void setUp() throws Exception {
-        rs = RegionStorage.create("test");
-        context = rs.getStorage();
-    }
-
-    @After
-    public void tearDown() throws Exception {
-        rs.delete(false);
-    }
-    
-    @Test
-    public void testInstanciate() throws Exception {
-        TopiaContext context = this.context.beginTransaction();
-
-        FisheryRegionDAO fisheryRegionDAO = IsisFishDAOHelper.getFisheryRegionDAO(context);
-        FisheryRegion fisheryRegion = fisheryRegionDAO.create();
-        log.debug(fisheryRegion + " - " + fisheryRegion.getClass().getName());
-        
-        EffortDescriptionDAO effortDescriptionDAO = IsisFishDAOHelper.getEffortDescriptionDAO(context);
-        EffortDescription effortDescription = effortDescriptionDAO.create();
-        log.debug(effortDescription + " - " + effortDescription.getClass().getName());
-        
-        GearDAO gearDAO = IsisFishDAOHelper.getGearDAO(context);
-        Gear gear = gearDAO.create();
-        log.debug(gear + " - " + gear.getClass().getName());
-
-        CellDAO cellDAO = IsisFishDAOHelper.getCellDAO(context);
-        Cell cell = cellDAO.create();
-        log.debug(cell + " - " + cell.getClass().getName());
-        
-        SpeciesDAO speciesDAO = IsisFishDAOHelper.getSpeciesDAO(context);
-        Species species = speciesDAO.create();
-        log.debug(species + " - " + species.getClass().getName());
-
-        MetierDAO metierDAO = IsisFishDAOHelper.getMetierDAO(context);
-        Metier metier = metierDAO.create();
-        log.debug(metier + " - " + metier.getClass().getName());
-
-        MetierSeasonInfoDAO metierSeasonInfoDAO = IsisFishDAOHelper.getMetierSeasonInfoDAO(context);
-        MetierSeasonInfo metierSeasonInfo = metierSeasonInfoDAO.create();
-        log.debug(metierSeasonInfo + " - " +metierSeasonInfo.getClass().getName());
-        
-        PopulationGroupDAO populationGroupDAO = IsisFishDAOHelper.getPopulationGroupDAO(context);
-        PopulationGroup populationGroup = populationGroupDAO.create();
-        log.debug(populationGroup + " - " + populationGroup.getClass().getName());
-
-        PopulationDAO populationDAO = IsisFishDAOHelper.getPopulationDAO(context);
-        Population population = populationDAO.create();
-        log.debug(population + " - " + population.getClass().getName());
-
-        PortDAO portDAO = IsisFishDAOHelper.getPortDAO(context);
-        Port port = portDAO.create();
-        log.debug(port + " - " + port.getClass().getName());
-
-        ResultDAO resultDAO = IsisFishDAOHelper.getResultDAO(context);
-        Result result = resultDAO.create();
-        log.debug(result + " - " + result.getClass().getName());
-
-        SeasonDAO seasonDAO = IsisFishDAOHelper.getSeasonDAO(context);
-        Season season = seasonDAO.create();
-        log.debug(season + " - " + season.getClass().getName());
-
-        PopulationSeasonInfoDAO PopulationSeasonInfoDAO = IsisFishDAOHelper.getPopulationSeasonInfoDAO(context);
-        PopulationSeasonInfo PopulationSeasonInfo = PopulationSeasonInfoDAO.create();
-        log.debug(PopulationSeasonInfo + " - " + PopulationSeasonInfo.getClass().getName());
-
-        SelectivityDAO selectivityDAO = IsisFishDAOHelper.getSelectivityDAO(context);
-        Selectivity selectivity = selectivityDAO.create();
-        log.debug(selectivity + " - " + selectivity.getClass().getName());
-
-        SetOfVesselsDAO setOfVesselsDAO = IsisFishDAOHelper.getSetOfVesselsDAO(context);
-        SetOfVessels setOfVessels = setOfVesselsDAO.create();
-        log.debug(setOfVessels + " - " + setOfVessels.getClass().getName());
-
-        StrategyMonthInfoDAO strategyMonthInfoDAO = IsisFishDAOHelper.getStrategyMonthInfoDAO(context);
-        StrategyMonthInfo strategyMonthInfo = strategyMonthInfoDAO.create();
-        log.debug(strategyMonthInfo + " - " + strategyMonthInfo.getClass().getName());
-
-        StrategyDAO strategyDAO = IsisFishDAOHelper.getStrategyDAO(context);
-        Strategy strategy = strategyDAO.create();
-        log.debug(strategy + " - " + strategy.getClass().getName());
-
-        TargetSpeciesDAO targetSpeciesDAO = IsisFishDAOHelper.getTargetSpeciesDAO(context);
-        TargetSpecies targetSpecies = targetSpeciesDAO.create();
-        log.debug(targetSpecies + " - " + targetSpecies.getClass().getName());
-
-        TripTypeDAO tripTypeDAO = IsisFishDAOHelper.getTripTypeDAO(context);
-        TripType tripType = tripTypeDAO.create();
-        log.debug(tripType + " - " + tripType.getClass().getName());
-
-        VesselTypeDAO vesselTypeDAO = IsisFishDAOHelper.getVesselTypeDAO(context);
-        VesselType vesselType = vesselTypeDAO.create();
-        log.debug(vesselType + " - " + vesselType.getClass().getName());
-
-        ZoneDAO zoneDAO = IsisFishDAOHelper.getZoneDAO(context);
-        Zone zone = zoneDAO.create();
-        log.debug(zone + " - " + zone.getClass().getName());
-
-        context.rollbackTransaction();
-    }
-
-
-    @Test
-    public void testMakePersistence() throws Exception {
-        TopiaContext context = this.context.beginTransaction();
-//        {
-//            AgeGroupDAO ps = IsisFishDAOHelper.getAgeGroupDAO(context);
-//            AgeGroup o = ps.create();
-//            o = ps.update(o);
-//        }
-        {
-            FisheryRegionDAO ps = IsisFishDAOHelper.getFisheryRegionDAO(context);
-            FisheryRegion o = ps.create();
-            o = ps.update(o);
-        }
-//        {
-//            CompositeZoneDAO ps = IsisFishDAOHelper.getCompositeZoneDAO(context);
-//            CompositeZone o = ps.create();
-//            o = ps.update(o);
-//        }
-        {
-            EffortDescriptionDAO ps = IsisFishDAOHelper.getEffortDescriptionDAO(context);
-            EffortDescription o = ps.create();
-            o = ps.update(o);
-        }
-//        {
-//            EmigrationDAO ps = IsisFishDAOHelper.getEmigrationDAO(context);
-//            Emigration o = ps.create();
-//            o = ps.update(o);
-//        }
-//        {
-//            EquationDAO ps = IsisFishDAOHelper.getEquationDAO(context);
-//            Equation o = ps.create();
-//            o = ps.update(o);
-//        }
-        {
-            GearDAO ps = IsisFishDAOHelper.getGearDAO(context);
-            Gear o = ps.create();
-            o = ps.update(o);
-        }
-//        {
-//            ImmigrationDAO ps = IsisFishDAOHelper.getImmigrationDAO(context);
-//            Immigration o = ps.create();
-//            o = ps.update(o);
-//        }
-//        {
-//            LengthGroupDAO ps = IsisFishDAOHelper.getLengthGroupDAO(context);
-//            LengthGroup o = ps.create();
-//            o = ps.update(o);
-//        }
-//        {
-//            MappingZoneReproZoneRecruDAO ps = IsisFishDAOHelper.getMappingZoneReproZoneRecruDAO(context);
-//            MappingZoneReproZoneRecru o = ps.create();
-//            o = ps.update(o);
-//        }
-        {
-            CellDAO ps = IsisFishDAOHelper.getCellDAO(context);
-            Cell o = ps.create();
-            o = ps.update(o);
-        }
-        {
-            SpeciesDAO ps = IsisFishDAOHelper.getSpeciesDAO(context);
-            Species o = ps.create();
-            o = ps.update(o);
-        }
-        {
-            MetierDAO ps = IsisFishDAOHelper.getMetierDAO(context);
-            Metier o = ps.create();
-            o = ps.update(o);
-        }
-        {
-            MetierSeasonInfoDAO ps = IsisFishDAOHelper.getMetierSeasonInfoDAO(context);
-            MetierSeasonInfo o = ps.create();
-            o = ps.update(o);
-        }
-//        {
-//            MigrationDAO ps = IsisFishDAOHelper.getMigrationDAO(context);
-//            Migration o = ps.create();
-//            o = ps.update(o);
-//        }
-        {
-//            try{
-                PopulationGroupDAO ps = IsisFishDAOHelper.getPopulationGroupDAO(context);
-                PopulationGroup o = ps.create();
-                o = ps.update(o);
-//                assertTrue(false); // normalement on a pas le droit d'instancier une entity abstraite
-//            }catch(TopiaException eee){
-//                assertTrue(true);
-//            }
-       }
-        {
-            PopulationDAO ps = IsisFishDAOHelper.getPopulationDAO(context);
-            Population o = ps.create();
-            o = ps.update(o);
-        }
-        {
-            PortDAO ps = IsisFishDAOHelper.getPortDAO(context);
-            Port o = ps.create();
-            o = ps.update(o);
-        }
-        {
-            ResultDAO ps = IsisFishDAOHelper.getResultDAO(context);
-            Result o = ps.create();
-            o = ps.update(o);
-        }
-        {
-            PopulationSeasonInfoDAO ps = IsisFishDAOHelper.getPopulationSeasonInfoDAO(context);
-            PopulationSeasonInfo o = ps.create();
-            o = ps.update(o);
-        }
-        {
-            SelectivityDAO ps = IsisFishDAOHelper.getSelectivityDAO(context);
-            Selectivity o = ps.create();
-            o = ps.update(o);
-        }
-        {
-            SetOfVesselsDAO ps = IsisFishDAOHelper.getSetOfVesselsDAO(context);
-            SetOfVessels o = ps.create();
-            o = ps.update(o);
-        }
-//        {
-//            SimpleZoneDAO ps = IsisFishDAOHelper.getSimpleZoneDAO(context);
-//            SimpleZone o = ps.create();
-//            o = ps.update(o);
-//        }
-        {
-            StrategyMonthInfoDAO ps = IsisFishDAOHelper.getStrategyMonthInfoDAO(context);
-            StrategyMonthInfo o = ps.create();
-            o = ps.update(o);
-        }
-        {
-            StrategyDAO ps = IsisFishDAOHelper.getStrategyDAO(context);
-            Strategy o = ps.create();
-            o = ps.update(o);
-        }
-        {
-            TargetSpeciesDAO ps = IsisFishDAOHelper.getTargetSpeciesDAO(context);
-            TargetSpecies o = ps.create();
-            o = ps.update(o);
-        }
-        {
-            TripTypeDAO ps = IsisFishDAOHelper.getTripTypeDAO(context);
-            TripType o = ps.create();
-            o = ps.update(o);
-        }
-        {
-            VesselTypeDAO ps = IsisFishDAOHelper.getVesselTypeDAO(context);
-            VesselType o = ps.create();
-            o = ps.update(o);
-        }
-        {
-            ZoneDAO ps = IsisFishDAOHelper.getZoneDAO(context);
-            Zone o = ps.create();
-            o = ps.update(o);
-        }
-        context.rollbackTransaction();
-    }
-
-    @Test
-    public void testFindAll() throws Exception {
-        TopiaContext context = this.context.beginTransaction();
-//        {
-//            AgeGroupDAO ps = IsisFishDAOHelper.getAgeGroupDAO(context);
-//            Collection<AgeGroup> list = ps.findAll();
-//            log.debug(list + " - " +ps.getClass().getName());
-//        }
-        {
-            FisheryRegionDAO ps = IsisFishDAOHelper.getFisheryRegionDAO(context);
-            Collection<FisheryRegion> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-//        {
-//            CompositeZoneDAO ps = IsisFishDAOHelper.getCompositeZoneDAO(context);
-//            Collection list<CompositeZone> = ps.findAll();
-//        }
-        {
-            EffortDescriptionDAO ps = IsisFishDAOHelper.getEffortDescriptionDAO(context);
-            Collection<EffortDescription> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-//        {
-//            EmigrationDAO ps = IsisFishDAOHelper.getEmigrationDAO(context);
-//            Collection<Emigration> list = ps.findAll();
-//            log.debug(list + " - " +ps.getClass().getName());
-//        }
-        {
-            GearDAO ps = IsisFishDAOHelper.getGearDAO(context);
-            Collection<Gear> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-//        {
-//            ImmigrationDAO ps = IsisFishDAOHelper.getImmigrationDAO(context);
-//            Collection<Immigration> list = ps.findAll();
-//            log.debug(list + " - " +ps.getClass().getName());
-//        }
-//        {
-//            LengthGroupDAO ps = IsisFishDAOHelper.getLengthGroupDAO(context);
-//            Collection<LengthGroup> list = ps.findAll();
-//            log.debug(list + " - " +ps.getClass().getName());
-//        }
-//        {
-//            MappingZoneReproZoneRecruDAO ps = IsisFishDAOHelper.getMappingZoneReproZoneRecruDAO(context);
-//            Collection<MappingZoneReproZoneRecru> list = ps.findAll();
-//            log.debug(list + " - " +ps.getClass().getName());
-//        }
-        {
-            CellDAO ps = IsisFishDAOHelper.getCellDAO(context);
-            Collection<Cell> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        {
-            SpeciesDAO ps = IsisFishDAOHelper.getSpeciesDAO(context);
-            Collection<Species> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        {
-            MetierDAO ps = IsisFishDAOHelper.getMetierDAO(context);
-            Collection<Metier> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        {
-            MetierSeasonInfoDAO ps = IsisFishDAOHelper.getMetierSeasonInfoDAO(context);
-            Collection<MetierSeasonInfo> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-//        {
-//            MigrationDAO ps = IsisFishDAOHelper.getMigrationDAO(context);
-//            Collection<Migration> list = ps.findAll();
-//            log.debug(list + " - " +ps.getClass().getName());
-//        }
-        {
-            PopulationGroupDAO ps = IsisFishDAOHelper.getPopulationGroupDAO(context);
-            Collection<PopulationGroup> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        {
-            PopulationDAO ps = IsisFishDAOHelper.getPopulationDAO(context);
-            Collection<Population> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        {
-            PortDAO ps = IsisFishDAOHelper.getPortDAO(context);
-            Collection<Port> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        {
-            ResultDAO ps = IsisFishDAOHelper.getResultDAO(context);
-            Collection<Result> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        {
-            PopulationSeasonInfoDAO ps = IsisFishDAOHelper.getPopulationSeasonInfoDAO(context);
-            Collection<PopulationSeasonInfo> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        {
-            SelectivityDAO ps = IsisFishDAOHelper.getSelectivityDAO(context);
-            Collection<Selectivity> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        {
-            SetOfVesselsDAO ps = IsisFishDAOHelper.getSetOfVesselsDAO(context);
-            Collection<SetOfVessels> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-//        {
-//            SimpleZoneDAO ps = IsisFishDAOHelper.getSimpleZoneDAO(context);
-//            Collection<SimpleZone> list = ps.findAll();
-//        }
-        {
-            StrategyMonthInfoDAO ps = IsisFishDAOHelper.getStrategyMonthInfoDAO(context);
-            Collection<StrategyMonthInfo> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        {
-            StrategyDAO ps = IsisFishDAOHelper.getStrategyDAO(context);
-            Collection<Strategy> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        {
-            TargetSpeciesDAO ps = IsisFishDAOHelper.getTargetSpeciesDAO(context);
-            Collection<TargetSpecies> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        {
-            TripTypeDAO ps = IsisFishDAOHelper.getTripTypeDAO(context);
-            Collection<TripType> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        {
-            VesselTypeDAO ps = IsisFishDAOHelper.getVesselTypeDAO(context);
-            Collection<VesselType> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        {
-            ZoneDAO ps = IsisFishDAOHelper.getZoneDAO(context);
-            Collection<Zone> list = ps.findAll();
-            log.debug(list + " - " +ps.getClass().getName());
-        }
-        context.rollbackTransaction();
-    }
-/*
-    public void testDelete() throws Exception {
-        TopiaContext context = this.context.beginTransaction();
-        {
-            AgeGroupDAO ps = IsisFishDAOHelper.getAgeGroupDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                AgeGroup o = (AgeGroup)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            RegionDAO ps = IsisFishDAOHelper.getRegionDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Region o = (Region)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            CompositeZoneDAO ps = IsisFishDAOHelper.getCompositeZoneDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                CompositeZone o = (CompositeZone)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            EffortDescriptionDAO ps = IsisFishDAOHelper.getEffortDescriptionDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                EffortDescription o = (EffortDescription)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            EmigrationDAO ps = IsisFishDAOHelper.getEmigrationDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Emigration o = (Emigration)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            EquationDAO ps = IsisFishDAOHelper.getEquationDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Equation o = (Equation)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            GearDAO ps = IsisFishDAOHelper.getGearDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Gear o = (Gear)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            ImmigrationDAO ps = IsisFishDAOHelper.getImmigrationDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Immigration o = (Immigration)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            LengthGroupDAO ps = IsisFishDAOHelper.getLengthGroupDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                LengthGroup o = (LengthGroup)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            MappingZoneReproZoneRecruDAO ps = IsisFishDAOHelper.getMappingZoneReproZoneRecruDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                MappingZoneReproZoneRecru o = (MappingZoneReproZoneRecru)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            CellDAO ps = IsisFishDAOHelper.getCellDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Cell o = (Cell)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            SpeciesDAO ps = IsisFishDAOHelper.getSpeciesDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Species o = (Species)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            MetierDAO ps = IsisFishDAOHelper.getMetierDAO(context);
-            Metier o = ps.create();
-        }
-        {
-            MetierSeasonInfoDAO ps = IsisFishDAOHelper.getMetierSeasonInfoDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                MetierSeasonInfo o = (MetierSeasonInfo)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            MigrationDAO ps = IsisFishDAOHelper.getMigrationDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Migration o = (Migration)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            MonthDAO ps = IsisFishDAOHelper.getMonthDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Month o = (Month)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            PopulationGroupDAO ps = IsisFishDAOHelper.getPopulationGroupDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                PopulationGroup o = (PopulationGroup)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            PopulationDAO ps = IsisFishDAOHelper.getPopulationDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Population o = (Population)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            PortDAO ps = IsisFishDAOHelper.getPortDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Port o = (Port)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            ResultManagerDAO ps = IsisFishDAOHelper.getResultManagerDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                ResultStorage o = (ResultStorage)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            SeasonDAO ps = IsisFishDAOHelper.getSeasonDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Season o = (Season)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            PopulationSeasonInfoDAO ps = IsisFishDAOHelper.getPopulationSeasonInfoDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                PopulationSeasonInfo o = (PopulationSeasonInfo)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            SelectivityDAO ps = IsisFishDAOHelper.getSelectivityDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Selectivity o = (Selectivity)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            SetOfVesselsDAO ps = IsisFishDAOHelper.getSetOfVesselsDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                SetOfVessels o = (SetOfVessels)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            SimpleZoneDAO ps = IsisFishDAOHelper.getSimpleZoneDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                SimpleZone o = (SimpleZone)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            StrategyMonthInfoDAO ps = IsisFishDAOHelper.getStrategyMonthInfoDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                StrategyMonthInfo o = (StrategyMonthInfo)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            StrategyDAO ps = IsisFishDAOHelper.getStrategyDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Strategy o = (Strategy)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            TargetSpeciesDAO ps = IsisFishDAOHelper.getTargetSpeciesDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                TargetSpecies o = (TargetSpecies)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            TimeUnitDAO ps = IsisFishDAOHelper.getTimeUnitDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                TimeUnit o = (TimeUnit)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            TripTypeDAO ps = IsisFishDAOHelper.getTripTypeDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                TripType o = (TripType)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            VesselTypeDAO ps = IsisFishDAOHelper.getVesselTypeDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                VesselType o = (VesselType)i.next();
-                ps.delete(o);
-            }
-        }
-        {
-            ZoneDAO ps = IsisFishDAOHelper.getZoneDAO(context);
-            Collection list = ps.findAll();
-            for(Iterator i=list.iterator(); i.hasNext();){
-                Zone o = (Zone)i.next();
-                ps.delete(o);
-            }
-        }
-        context.rollbackTransaction();
-    }
-    */
-} // Persistence
-

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/AnalysePlanStorageTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/AnalysePlanStorageTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/AnalysePlanStorageTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -26,10 +26,10 @@
 import java.util.Map;
 
 import org.junit.Assert;
-import org.junit.BeforeClass;
+import org.junit.Before;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 import fr.ifremer.isisfish.IsisFish;
 import freemarker.template.Configuration;
 import freemarker.template.Template;
@@ -45,14 +45,13 @@
  * Last update: $Date: 2008-10-07 18:46:13 +0200 (mar 07 oct 2008) $
  * by : $Author: tchemit $
  */
-public class AnalysePlanStorageTest {
+public class AnalysePlanStorageTest extends AbstractIsisFishTest {
 
-    protected static Configuration freemarkerConfiguration;
+    protected Configuration freemarkerConfiguration;
 
-    @BeforeClass
-    public static void init() throws Exception {
-        TestUtils.init();
-        freemarkerConfiguration = TestUtils.getFreemarkerConfiguration();
+    @Before
+    public void setUp() throws Exception {
+        freemarkerConfiguration = getFreemarkerConfiguration();
     }
 
     @Test
@@ -81,11 +80,11 @@
         template.process(root, out);
         out.flush();
         String content = out.toString();
-        
+
         // remove it to compile, it's in isis fish data project
         Assert.assertTrue(content.indexOf("import scripts.ResultName;") > 0);
         content = content.replaceFirst("import scripts.ResultName;", "");
-        
+
         analysePlanStorage.setContent(content);
 
         // 0 = compile success

Added: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/DataStorageTestHelper.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/DataStorageTestHelper.java	                        (rev 0)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/DataStorageTestHelper.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -0,0 +1,56 @@
+/* *##%
+ * Copyright (C) 2009 Code Lutin
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 2
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.
+ *##%*/
+
+package fr.ifremer.isisfish.datastore;
+
+import org.junit.Ignore;
+
+/**
+ * Helper to acces protected static cache objects.
+ *
+ * @author chatellier
+ * @version $Revision: 1.0 $
+ * 
+ * Last update : $Date: 14 mai 2009 $
+ * By : $Author: chatellier $
+ */
+ at Ignore
+public class DataStorageTestHelper {
+
+    /**
+     * Clear static simulation cache.
+     */
+    public static void clearSimulationCache() {
+        SimulationStorage.simulations.clear();
+    }
+    
+    /**
+     * Clear static region cache.
+     */
+    public static void clearRegionCache() {
+        RegionStorage.regions.clear();
+    }
+    
+    /**
+     * Clear all static cache.
+     */
+    public static void clearAllCache() {
+        clearSimulationCache();
+        clearRegionCache();
+    }
+}

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/ExportStorageTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/ExportStorageTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/ExportStorageTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -26,10 +26,10 @@
 import java.util.Map;
 
 import org.junit.Assert;
-import org.junit.BeforeClass;
+import org.junit.Before;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 import fr.ifremer.isisfish.IsisFish;
 import freemarker.template.Configuration;
 import freemarker.template.Template;
@@ -45,14 +45,13 @@
  * Last update: $Date: 2008-10-07 18:46:13 +0200 (mar 07 oct 2008) $
  * by : $Author: tchemit $
  */
-public class ExportStorageTest {
+public class ExportStorageTest extends AbstractIsisFishTest {
 
-    protected static Configuration freemarkerConfiguration;
+    protected Configuration freemarkerConfiguration;
 
-    @BeforeClass
-    public static void init() throws Exception {
-        TestUtils.init();
-        freemarkerConfiguration = TestUtils.getFreemarkerConfiguration();
+    @Before
+    public void setUp() throws Exception {
+        freemarkerConfiguration = getFreemarkerConfiguration();
     }
 
     @Test
@@ -60,8 +59,7 @@
 
         String fileName = "TestExport1";
 
-        ExportStorage exportStorage = ExportStorage
-                .getExport(fileName);
+        ExportStorage exportStorage = ExportStorage.getExport(fileName);
 
         // get template
         Template template = freemarkerConfiguration

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/FormuleStorageTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/FormuleStorageTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/FormuleStorageTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -25,10 +25,10 @@
 import java.util.HashMap;
 import java.util.Map;
 
-import org.junit.BeforeClass;
+import org.junit.Before;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 import fr.ifremer.isisfish.IsisFish;
 import freemarker.template.Configuration;
 import freemarker.template.Template;
@@ -44,14 +44,13 @@
  * Last update: $Date: 2008-10-07 18:46:13 +0200 (mar 07 oct 2008) $
  * by : $Author: tchemit $
  */
-public class FormuleStorageTest {
+public class FormuleStorageTest extends AbstractIsisFishTest {
 
-    protected static Configuration freemarkerConfiguration;
+    protected Configuration freemarkerConfiguration;
 
-    @BeforeClass
-    public static void init() throws Exception {
-        TestUtils.init();
-        freemarkerConfiguration = TestUtils.getFreemarkerConfiguration();
+    @Before
+    public void setUp() throws Exception {
+        freemarkerConfiguration = getFreemarkerConfiguration();
     }
 
     @Test
@@ -59,8 +58,8 @@
 
         String fileName = "TestFormule1";
 
-        FormuleStorage formuleStorage = FormuleStorage
-                .getFormule("test", fileName);
+        FormuleStorage formuleStorage = FormuleStorage.getFormule("test",
+                fileName);
 
         // get template
         Template template = freemarkerConfiguration

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/RuleStorageTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/RuleStorageTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/RuleStorageTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -26,10 +26,10 @@
 import java.util.Map;
 
 import org.junit.Assert;
-import org.junit.BeforeClass;
+import org.junit.Before;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 import fr.ifremer.isisfish.IsisFish;
 import freemarker.template.Configuration;
 import freemarker.template.Template;
@@ -45,14 +45,13 @@
  * Last update: $Date: 2008-10-07 18:46:13 +0200 (mar 07 oct 2008) $
  * by : $Author: tchemit $
  */
-public class RuleStorageTest {
+public class RuleStorageTest extends AbstractIsisFishTest {
 
-    protected static Configuration freemarkerConfiguration;
+    protected Configuration freemarkerConfiguration;
 
-    @BeforeClass
-    public static void init() throws Exception {
-        TestUtils.init();
-        freemarkerConfiguration = TestUtils.getFreemarkerConfiguration();
+    @Before
+    public void setUp() throws Exception {
+        freemarkerConfiguration = getFreemarkerConfiguration();
     }
 
     @Test
@@ -60,8 +59,7 @@
 
         String fileName = "TestRule1";
 
-        RuleStorage ruleStorage = RuleStorage
-                .getRule(fileName);
+        RuleStorage ruleStorage = RuleStorage.getRule(fileName);
 
         // get template
         Template template = freemarkerConfiguration
@@ -81,11 +79,11 @@
         template.process(root, out);
         out.flush();
         String content = out.toString();
-        
+
         // remove it to compile, it's in isis fish data project
         Assert.assertTrue(content.indexOf("import scripts.ResultName;") > 0);
         content = content.replaceFirst("import scripts.ResultName;", "");
-        
+
         ruleStorage.setContent(content);
 
         // 0 = compile success

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/ScriptStorageTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/ScriptStorageTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/ScriptStorageTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -27,10 +27,10 @@
 
 import org.codelutin.util.FileUtil;
 import org.junit.Assert;
-import org.junit.BeforeClass;
+import org.junit.Before;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 import fr.ifremer.isisfish.IsisFish;
 import freemarker.template.Configuration;
 import freemarker.template.Template;
@@ -46,17 +46,13 @@
  * Last update: $Date$
  * by : $Author$
  */
-public class ScriptStorageTest {
+public class ScriptStorageTest extends AbstractIsisFishTest {
 
-    protected static Configuration freemarkerConfiguration;
-    
-    /*
-     * @see TestCase#setUp()
-     */
-    @BeforeClass
-    public static void init() throws Exception {
-        TestUtils.init();
-        freemarkerConfiguration = TestUtils.getFreemarkerConfiguration();
+    protected Configuration freemarkerConfiguration;
+
+    @Before
+    public void setUp() throws Exception {
+        freemarkerConfiguration = getFreemarkerConfiguration();
     }
 
     /*
@@ -95,8 +91,7 @@
 
         String fileName = "TestScript1";
 
-        ScriptStorage scriptStorage = ScriptStorage
-                .getScript(fileName);
+        ScriptStorage scriptStorage = ScriptStorage.getScript(fileName);
 
         // get template
         Template template = freemarkerConfiguration
@@ -116,11 +111,11 @@
         template.process(root, out);
         out.flush();
         String content = out.toString();
-        
+
         // remove it to compile, it's in isis fish data project
         Assert.assertTrue(content.indexOf("import scripts.ResultName;") > 0);
         content = content.replaceFirst("import scripts.ResultName;", "");
-        
+
         scriptStorage.setContent(content);
 
         // 0 = compile success

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/SensitivityStorageTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/SensitivityStorageTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/SensitivityStorageTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -26,10 +26,10 @@
 import java.util.Map;
 
 import org.junit.Assert;
-import org.junit.BeforeClass;
+import org.junit.Before;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 import fr.ifremer.isisfish.IsisFish;
 import freemarker.template.Configuration;
 import freemarker.template.Template;
@@ -45,14 +45,13 @@
  * Last update: $Date: 2008-10-07 18:46:13 +0200 (mar 07 oct 2008) $
  * by : $Author: tchemit $
  */
-public class SensitivityStorageTest {
+public class SensitivityStorageTest extends AbstractIsisFishTest {
 
-    protected static Configuration freemarkerConfiguration;
+    protected Configuration freemarkerConfiguration;
 
-    @BeforeClass
-    public static void init() throws Exception {
-        TestUtils.init();
-        freemarkerConfiguration = TestUtils.getFreemarkerConfiguration();
+    @Before
+    public void setUp() throws Exception {
+        freemarkerConfiguration = getFreemarkerConfiguration();
     }
 
     @Test

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/SimulatorStorageTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/SimulatorStorageTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/datastore/SimulatorStorageTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -26,10 +26,10 @@
 import java.util.Map;
 
 import org.junit.Assert;
-import org.junit.BeforeClass;
+import org.junit.Before;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 import fr.ifremer.isisfish.IsisFish;
 import freemarker.template.Configuration;
 import freemarker.template.Template;
@@ -45,14 +45,13 @@
  * Last update: $Date: 2008-10-07 18:46:13 +0200 (mar 07 oct 2008) $
  * by : $Author: tchemit $
  */
-public class SimulatorStorageTest {
+public class SimulatorStorageTest extends AbstractIsisFishTest {
 
-    protected static Configuration freemarkerConfiguration;
+    protected Configuration freemarkerConfiguration;
 
-    @BeforeClass
-    public static void init() throws Exception {
-        TestUtils.init();
-        freemarkerConfiguration = TestUtils.getFreemarkerConfiguration();
+    @Before
+    public void setUp() throws Exception {
+        freemarkerConfiguration = getFreemarkerConfiguration();
     }
 
     @Test

Copied: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/entity/PersistenceTest.java (from rev 2214, isis-fish/trunk/src/test/java/fr/ifremer/isisfish/PersistenceTest.java)
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/entity/PersistenceTest.java	                        (rev 0)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/entity/PersistenceTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -0,0 +1,759 @@
+/* *##%
+* Copyright (C) 2002, 2009 Code Lutin, Cédric Pineau, Benjamin Poussin
+*
+* This program is free software; you can redistribute it and/or
+* modify it under the terms of the GNU General Public License
+* as published by the Free Software Foundation; either version 2
+* of the License, or (at your option) any later version.
+*
+* This program is distributed in the hope that it will be useful,
+* but WITHOUT ANY WARRANTY; without even the implied warranty of
+* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+* GNU General Public License for more details.
+*
+* You should have received a copy of the GNU General Public License
+* along with this program; if not, write to the Free Software
+* Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.
+*##%*/
+
+package fr.ifremer.isisfish.entity;
+
+import java.util.Collection;
+
+import org.apache.commons.logging.Log;
+import org.apache.commons.logging.LogFactory;
+import org.codelutin.topia.TopiaContext;
+import org.junit.After;
+import org.junit.Before;
+import org.junit.Test;
+
+import fr.ifremer.isisfish.AbstractIsisFishTest;
+import fr.ifremer.isisfish.IsisFishDAOHelper;
+import fr.ifremer.isisfish.datastore.RegionStorage;
+import fr.ifremer.isisfish.entities.Cell;
+import fr.ifremer.isisfish.entities.CellDAO;
+import fr.ifremer.isisfish.entities.EffortDescription;
+import fr.ifremer.isisfish.entities.EffortDescriptionDAO;
+import fr.ifremer.isisfish.entities.FisheryRegion;
+import fr.ifremer.isisfish.entities.FisheryRegionDAO;
+import fr.ifremer.isisfish.entities.Gear;
+import fr.ifremer.isisfish.entities.GearDAO;
+import fr.ifremer.isisfish.entities.Metier;
+import fr.ifremer.isisfish.entities.MetierDAO;
+import fr.ifremer.isisfish.entities.MetierSeasonInfo;
+import fr.ifremer.isisfish.entities.MetierSeasonInfoDAO;
+import fr.ifremer.isisfish.entities.Population;
+import fr.ifremer.isisfish.entities.PopulationDAO;
+import fr.ifremer.isisfish.entities.PopulationGroup;
+import fr.ifremer.isisfish.entities.PopulationGroupDAO;
+import fr.ifremer.isisfish.entities.PopulationSeasonInfo;
+import fr.ifremer.isisfish.entities.PopulationSeasonInfoDAO;
+import fr.ifremer.isisfish.entities.Port;
+import fr.ifremer.isisfish.entities.PortDAO;
+import fr.ifremer.isisfish.entities.Result;
+import fr.ifremer.isisfish.entities.ResultDAO;
+import fr.ifremer.isisfish.entities.Season;
+import fr.ifremer.isisfish.entities.SeasonDAO;
+import fr.ifremer.isisfish.entities.Selectivity;
+import fr.ifremer.isisfish.entities.SelectivityDAO;
+import fr.ifremer.isisfish.entities.SetOfVessels;
+import fr.ifremer.isisfish.entities.SetOfVesselsDAO;
+import fr.ifremer.isisfish.entities.Species;
+import fr.ifremer.isisfish.entities.SpeciesDAO;
+import fr.ifremer.isisfish.entities.Strategy;
+import fr.ifremer.isisfish.entities.StrategyDAO;
+import fr.ifremer.isisfish.entities.StrategyMonthInfo;
+import fr.ifremer.isisfish.entities.StrategyMonthInfoDAO;
+import fr.ifremer.isisfish.entities.TargetSpecies;
+import fr.ifremer.isisfish.entities.TargetSpeciesDAO;
+import fr.ifremer.isisfish.entities.TripType;
+import fr.ifremer.isisfish.entities.TripTypeDAO;
+import fr.ifremer.isisfish.entities.VesselType;
+import fr.ifremer.isisfish.entities.VesselTypeDAO;
+import fr.ifremer.isisfish.entities.Zone;
+import fr.ifremer.isisfish.entities.ZoneDAO;
+
+/**
+ * PersistenceTest.
+ *
+ * Created: 3 août 2004
+ *
+ * @author Benjamin Poussin <poussin at codelutin.com>
+ * @version $Revision$
+ *
+ * Mise a jour: $Date$
+ * par : $Author$
+ */
+public class PersistenceTest extends AbstractIsisFishTest {
+
+    /**
+     * Logger for this class
+     */
+    private static final Log log = LogFactory.getLog(PersistenceTest.class);
+    
+    // Persistence
+    protected TopiaContext context = null;
+    protected RegionStorage rs;
+    
+    @Before
+    public void setUp() throws Exception {
+        rs = RegionStorage.create("test");
+        context = rs.getStorage();
+    }
+
+    @After
+    public void tearDown() throws Exception {
+        rs.delete(false);
+    }
+    
+    @Test
+    public void testInstanciate() throws Exception {
+        TopiaContext context = this.context.beginTransaction();
+
+        FisheryRegionDAO fisheryRegionDAO = IsisFishDAOHelper.getFisheryRegionDAO(context);
+        FisheryRegion fisheryRegion = fisheryRegionDAO.create();
+        log.debug(fisheryRegion + " - " + fisheryRegion.getClass().getName());
+        
+        EffortDescriptionDAO effortDescriptionDAO = IsisFishDAOHelper.getEffortDescriptionDAO(context);
+        EffortDescription effortDescription = effortDescriptionDAO.create();
+        log.debug(effortDescription + " - " + effortDescription.getClass().getName());
+        
+        GearDAO gearDAO = IsisFishDAOHelper.getGearDAO(context);
+        Gear gear = gearDAO.create();
+        log.debug(gear + " - " + gear.getClass().getName());
+
+        CellDAO cellDAO = IsisFishDAOHelper.getCellDAO(context);
+        Cell cell = cellDAO.create();
+        log.debug(cell + " - " + cell.getClass().getName());
+        
+        SpeciesDAO speciesDAO = IsisFishDAOHelper.getSpeciesDAO(context);
+        Species species = speciesDAO.create();
+        log.debug(species + " - " + species.getClass().getName());
+
+        MetierDAO metierDAO = IsisFishDAOHelper.getMetierDAO(context);
+        Metier metier = metierDAO.create();
+        log.debug(metier + " - " + metier.getClass().getName());
+
+        MetierSeasonInfoDAO metierSeasonInfoDAO = IsisFishDAOHelper.getMetierSeasonInfoDAO(context);
+        MetierSeasonInfo metierSeasonInfo = metierSeasonInfoDAO.create();
+        log.debug(metierSeasonInfo + " - " +metierSeasonInfo.getClass().getName());
+        
+        PopulationGroupDAO populationGroupDAO = IsisFishDAOHelper.getPopulationGroupDAO(context);
+        PopulationGroup populationGroup = populationGroupDAO.create();
+        log.debug(populationGroup + " - " + populationGroup.getClass().getName());
+
+        PopulationDAO populationDAO = IsisFishDAOHelper.getPopulationDAO(context);
+        Population population = populationDAO.create();
+        log.debug(population + " - " + population.getClass().getName());
+
+        PortDAO portDAO = IsisFishDAOHelper.getPortDAO(context);
+        Port port = portDAO.create();
+        log.debug(port + " - " + port.getClass().getName());
+
+        ResultDAO resultDAO = IsisFishDAOHelper.getResultDAO(context);
+        Result result = resultDAO.create();
+        log.debug(result + " - " + result.getClass().getName());
+
+        SeasonDAO seasonDAO = IsisFishDAOHelper.getSeasonDAO(context);
+        Season season = seasonDAO.create();
+        log.debug(season + " - " + season.getClass().getName());
+
+        PopulationSeasonInfoDAO PopulationSeasonInfoDAO = IsisFishDAOHelper.getPopulationSeasonInfoDAO(context);
+        PopulationSeasonInfo PopulationSeasonInfo = PopulationSeasonInfoDAO.create();
+        log.debug(PopulationSeasonInfo + " - " + PopulationSeasonInfo.getClass().getName());
+
+        SelectivityDAO selectivityDAO = IsisFishDAOHelper.getSelectivityDAO(context);
+        Selectivity selectivity = selectivityDAO.create();
+        log.debug(selectivity + " - " + selectivity.getClass().getName());
+
+        SetOfVesselsDAO setOfVesselsDAO = IsisFishDAOHelper.getSetOfVesselsDAO(context);
+        SetOfVessels setOfVessels = setOfVesselsDAO.create();
+        log.debug(setOfVessels + " - " + setOfVessels.getClass().getName());
+
+        StrategyMonthInfoDAO strategyMonthInfoDAO = IsisFishDAOHelper.getStrategyMonthInfoDAO(context);
+        StrategyMonthInfo strategyMonthInfo = strategyMonthInfoDAO.create();
+        log.debug(strategyMonthInfo + " - " + strategyMonthInfo.getClass().getName());
+
+        StrategyDAO strategyDAO = IsisFishDAOHelper.getStrategyDAO(context);
+        Strategy strategy = strategyDAO.create();
+        log.debug(strategy + " - " + strategy.getClass().getName());
+
+        TargetSpeciesDAO targetSpeciesDAO = IsisFishDAOHelper.getTargetSpeciesDAO(context);
+        TargetSpecies targetSpecies = targetSpeciesDAO.create();
+        log.debug(targetSpecies + " - " + targetSpecies.getClass().getName());
+
+        TripTypeDAO tripTypeDAO = IsisFishDAOHelper.getTripTypeDAO(context);
+        TripType tripType = tripTypeDAO.create();
+        log.debug(tripType + " - " + tripType.getClass().getName());
+
+        VesselTypeDAO vesselTypeDAO = IsisFishDAOHelper.getVesselTypeDAO(context);
+        VesselType vesselType = vesselTypeDAO.create();
+        log.debug(vesselType + " - " + vesselType.getClass().getName());
+
+        ZoneDAO zoneDAO = IsisFishDAOHelper.getZoneDAO(context);
+        Zone zone = zoneDAO.create();
+        log.debug(zone + " - " + zone.getClass().getName());
+
+        context.rollbackTransaction();
+    }
+
+
+    @Test
+    public void testMakePersistence() throws Exception {
+        TopiaContext context = this.context.beginTransaction();
+//        {
+//            AgeGroupDAO ps = IsisFishDAOHelper.getAgeGroupDAO(context);
+//            AgeGroup o = ps.create();
+//            o = ps.update(o);
+//        }
+        {
+            FisheryRegionDAO ps = IsisFishDAOHelper.getFisheryRegionDAO(context);
+            FisheryRegion o = ps.create();
+            o = ps.update(o);
+        }
+//        {
+//            CompositeZoneDAO ps = IsisFishDAOHelper.getCompositeZoneDAO(context);
+//            CompositeZone o = ps.create();
+//            o = ps.update(o);
+//        }
+        {
+            EffortDescriptionDAO ps = IsisFishDAOHelper.getEffortDescriptionDAO(context);
+            EffortDescription o = ps.create();
+            o = ps.update(o);
+        }
+//        {
+//            EmigrationDAO ps = IsisFishDAOHelper.getEmigrationDAO(context);
+//            Emigration o = ps.create();
+//            o = ps.update(o);
+//        }
+//        {
+//            EquationDAO ps = IsisFishDAOHelper.getEquationDAO(context);
+//            Equation o = ps.create();
+//            o = ps.update(o);
+//        }
+        {
+            GearDAO ps = IsisFishDAOHelper.getGearDAO(context);
+            Gear o = ps.create();
+            o = ps.update(o);
+        }
+//        {
+//            ImmigrationDAO ps = IsisFishDAOHelper.getImmigrationDAO(context);
+//            Immigration o = ps.create();
+//            o = ps.update(o);
+//        }
+//        {
+//            LengthGroupDAO ps = IsisFishDAOHelper.getLengthGroupDAO(context);
+//            LengthGroup o = ps.create();
+//            o = ps.update(o);
+//        }
+//        {
+//            MappingZoneReproZoneRecruDAO ps = IsisFishDAOHelper.getMappingZoneReproZoneRecruDAO(context);
+//            MappingZoneReproZoneRecru o = ps.create();
+//            o = ps.update(o);
+//        }
+        {
+            CellDAO ps = IsisFishDAOHelper.getCellDAO(context);
+            Cell o = ps.create();
+            o = ps.update(o);
+        }
+        {
+            SpeciesDAO ps = IsisFishDAOHelper.getSpeciesDAO(context);
+            Species o = ps.create();
+            o = ps.update(o);
+        }
+        {
+            MetierDAO ps = IsisFishDAOHelper.getMetierDAO(context);
+            Metier o = ps.create();
+            o = ps.update(o);
+        }
+        {
+            MetierSeasonInfoDAO ps = IsisFishDAOHelper.getMetierSeasonInfoDAO(context);
+            MetierSeasonInfo o = ps.create();
+            o = ps.update(o);
+        }
+//        {
+//            MigrationDAO ps = IsisFishDAOHelper.getMigrationDAO(context);
+//            Migration o = ps.create();
+//            o = ps.update(o);
+//        }
+        {
+//            try{
+                PopulationGroupDAO ps = IsisFishDAOHelper.getPopulationGroupDAO(context);
+                PopulationGroup o = ps.create();
+                o = ps.update(o);
+//                assertTrue(false); // normalement on a pas le droit d'instancier une entity abstraite
+//            }catch(TopiaException eee){
+//                assertTrue(true);
+//            }
+       }
+        {
+            PopulationDAO ps = IsisFishDAOHelper.getPopulationDAO(context);
+            Population o = ps.create();
+            o = ps.update(o);
+        }
+        {
+            PortDAO ps = IsisFishDAOHelper.getPortDAO(context);
+            Port o = ps.create();
+            o = ps.update(o);
+        }
+        {
+            ResultDAO ps = IsisFishDAOHelper.getResultDAO(context);
+            Result o = ps.create();
+            o = ps.update(o);
+        }
+        {
+            PopulationSeasonInfoDAO ps = IsisFishDAOHelper.getPopulationSeasonInfoDAO(context);
+            PopulationSeasonInfo o = ps.create();
+            o = ps.update(o);
+        }
+        {
+            SelectivityDAO ps = IsisFishDAOHelper.getSelectivityDAO(context);
+            Selectivity o = ps.create();
+            o = ps.update(o);
+        }
+        {
+            SetOfVesselsDAO ps = IsisFishDAOHelper.getSetOfVesselsDAO(context);
+            SetOfVessels o = ps.create();
+            o = ps.update(o);
+        }
+//        {
+//            SimpleZoneDAO ps = IsisFishDAOHelper.getSimpleZoneDAO(context);
+//            SimpleZone o = ps.create();
+//            o = ps.update(o);
+//        }
+        {
+            StrategyMonthInfoDAO ps = IsisFishDAOHelper.getStrategyMonthInfoDAO(context);
+            StrategyMonthInfo o = ps.create();
+            o = ps.update(o);
+        }
+        {
+            StrategyDAO ps = IsisFishDAOHelper.getStrategyDAO(context);
+            Strategy o = ps.create();
+            o = ps.update(o);
+        }
+        {
+            TargetSpeciesDAO ps = IsisFishDAOHelper.getTargetSpeciesDAO(context);
+            TargetSpecies o = ps.create();
+            o = ps.update(o);
+        }
+        {
+            TripTypeDAO ps = IsisFishDAOHelper.getTripTypeDAO(context);
+            TripType o = ps.create();
+            o = ps.update(o);
+        }
+        {
+            VesselTypeDAO ps = IsisFishDAOHelper.getVesselTypeDAO(context);
+            VesselType o = ps.create();
+            o = ps.update(o);
+        }
+        {
+            ZoneDAO ps = IsisFishDAOHelper.getZoneDAO(context);
+            Zone o = ps.create();
+            o = ps.update(o);
+        }
+        context.rollbackTransaction();
+    }
+
+    @Test
+    public void testFindAll() throws Exception {
+        TopiaContext context = this.context.beginTransaction();
+//        {
+//            AgeGroupDAO ps = IsisFishDAOHelper.getAgeGroupDAO(context);
+//            Collection<AgeGroup> list = ps.findAll();
+//            log.debug(list + " - " +ps.getClass().getName());
+//        }
+        {
+            FisheryRegionDAO ps = IsisFishDAOHelper.getFisheryRegionDAO(context);
+            Collection<FisheryRegion> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+//        {
+//            CompositeZoneDAO ps = IsisFishDAOHelper.getCompositeZoneDAO(context);
+//            Collection list<CompositeZone> = ps.findAll();
+//        }
+        {
+            EffortDescriptionDAO ps = IsisFishDAOHelper.getEffortDescriptionDAO(context);
+            Collection<EffortDescription> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+//        {
+//            EmigrationDAO ps = IsisFishDAOHelper.getEmigrationDAO(context);
+//            Collection<Emigration> list = ps.findAll();
+//            log.debug(list + " - " +ps.getClass().getName());
+//        }
+        {
+            GearDAO ps = IsisFishDAOHelper.getGearDAO(context);
+            Collection<Gear> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+//        {
+//            ImmigrationDAO ps = IsisFishDAOHelper.getImmigrationDAO(context);
+//            Collection<Immigration> list = ps.findAll();
+//            log.debug(list + " - " +ps.getClass().getName());
+//        }
+//        {
+//            LengthGroupDAO ps = IsisFishDAOHelper.getLengthGroupDAO(context);
+//            Collection<LengthGroup> list = ps.findAll();
+//            log.debug(list + " - " +ps.getClass().getName());
+//        }
+//        {
+//            MappingZoneReproZoneRecruDAO ps = IsisFishDAOHelper.getMappingZoneReproZoneRecruDAO(context);
+//            Collection<MappingZoneReproZoneRecru> list = ps.findAll();
+//            log.debug(list + " - " +ps.getClass().getName());
+//        }
+        {
+            CellDAO ps = IsisFishDAOHelper.getCellDAO(context);
+            Collection<Cell> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        {
+            SpeciesDAO ps = IsisFishDAOHelper.getSpeciesDAO(context);
+            Collection<Species> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        {
+            MetierDAO ps = IsisFishDAOHelper.getMetierDAO(context);
+            Collection<Metier> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        {
+            MetierSeasonInfoDAO ps = IsisFishDAOHelper.getMetierSeasonInfoDAO(context);
+            Collection<MetierSeasonInfo> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+//        {
+//            MigrationDAO ps = IsisFishDAOHelper.getMigrationDAO(context);
+//            Collection<Migration> list = ps.findAll();
+//            log.debug(list + " - " +ps.getClass().getName());
+//        }
+        {
+            PopulationGroupDAO ps = IsisFishDAOHelper.getPopulationGroupDAO(context);
+            Collection<PopulationGroup> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        {
+            PopulationDAO ps = IsisFishDAOHelper.getPopulationDAO(context);
+            Collection<Population> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        {
+            PortDAO ps = IsisFishDAOHelper.getPortDAO(context);
+            Collection<Port> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        {
+            ResultDAO ps = IsisFishDAOHelper.getResultDAO(context);
+            Collection<Result> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        {
+            PopulationSeasonInfoDAO ps = IsisFishDAOHelper.getPopulationSeasonInfoDAO(context);
+            Collection<PopulationSeasonInfo> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        {
+            SelectivityDAO ps = IsisFishDAOHelper.getSelectivityDAO(context);
+            Collection<Selectivity> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        {
+            SetOfVesselsDAO ps = IsisFishDAOHelper.getSetOfVesselsDAO(context);
+            Collection<SetOfVessels> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+//        {
+//            SimpleZoneDAO ps = IsisFishDAOHelper.getSimpleZoneDAO(context);
+//            Collection<SimpleZone> list = ps.findAll();
+//        }
+        {
+            StrategyMonthInfoDAO ps = IsisFishDAOHelper.getStrategyMonthInfoDAO(context);
+            Collection<StrategyMonthInfo> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        {
+            StrategyDAO ps = IsisFishDAOHelper.getStrategyDAO(context);
+            Collection<Strategy> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        {
+            TargetSpeciesDAO ps = IsisFishDAOHelper.getTargetSpeciesDAO(context);
+            Collection<TargetSpecies> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        {
+            TripTypeDAO ps = IsisFishDAOHelper.getTripTypeDAO(context);
+            Collection<TripType> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        {
+            VesselTypeDAO ps = IsisFishDAOHelper.getVesselTypeDAO(context);
+            Collection<VesselType> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        {
+            ZoneDAO ps = IsisFishDAOHelper.getZoneDAO(context);
+            Collection<Zone> list = ps.findAll();
+            log.debug(list + " - " +ps.getClass().getName());
+        }
+        context.rollbackTransaction();
+    }
+/*
+    public void testDelete() throws Exception {
+        TopiaContext context = this.context.beginTransaction();
+        {
+            AgeGroupDAO ps = IsisFishDAOHelper.getAgeGroupDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                AgeGroup o = (AgeGroup)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            RegionDAO ps = IsisFishDAOHelper.getRegionDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Region o = (Region)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            CompositeZoneDAO ps = IsisFishDAOHelper.getCompositeZoneDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                CompositeZone o = (CompositeZone)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            EffortDescriptionDAO ps = IsisFishDAOHelper.getEffortDescriptionDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                EffortDescription o = (EffortDescription)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            EmigrationDAO ps = IsisFishDAOHelper.getEmigrationDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Emigration o = (Emigration)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            EquationDAO ps = IsisFishDAOHelper.getEquationDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Equation o = (Equation)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            GearDAO ps = IsisFishDAOHelper.getGearDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Gear o = (Gear)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            ImmigrationDAO ps = IsisFishDAOHelper.getImmigrationDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Immigration o = (Immigration)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            LengthGroupDAO ps = IsisFishDAOHelper.getLengthGroupDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                LengthGroup o = (LengthGroup)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            MappingZoneReproZoneRecruDAO ps = IsisFishDAOHelper.getMappingZoneReproZoneRecruDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                MappingZoneReproZoneRecru o = (MappingZoneReproZoneRecru)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            CellDAO ps = IsisFishDAOHelper.getCellDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Cell o = (Cell)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            SpeciesDAO ps = IsisFishDAOHelper.getSpeciesDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Species o = (Species)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            MetierDAO ps = IsisFishDAOHelper.getMetierDAO(context);
+            Metier o = ps.create();
+        }
+        {
+            MetierSeasonInfoDAO ps = IsisFishDAOHelper.getMetierSeasonInfoDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                MetierSeasonInfo o = (MetierSeasonInfo)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            MigrationDAO ps = IsisFishDAOHelper.getMigrationDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Migration o = (Migration)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            MonthDAO ps = IsisFishDAOHelper.getMonthDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Month o = (Month)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            PopulationGroupDAO ps = IsisFishDAOHelper.getPopulationGroupDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                PopulationGroup o = (PopulationGroup)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            PopulationDAO ps = IsisFishDAOHelper.getPopulationDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Population o = (Population)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            PortDAO ps = IsisFishDAOHelper.getPortDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Port o = (Port)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            ResultManagerDAO ps = IsisFishDAOHelper.getResultManagerDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                ResultStorage o = (ResultStorage)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            SeasonDAO ps = IsisFishDAOHelper.getSeasonDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Season o = (Season)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            PopulationSeasonInfoDAO ps = IsisFishDAOHelper.getPopulationSeasonInfoDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                PopulationSeasonInfo o = (PopulationSeasonInfo)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            SelectivityDAO ps = IsisFishDAOHelper.getSelectivityDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Selectivity o = (Selectivity)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            SetOfVesselsDAO ps = IsisFishDAOHelper.getSetOfVesselsDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                SetOfVessels o = (SetOfVessels)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            SimpleZoneDAO ps = IsisFishDAOHelper.getSimpleZoneDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                SimpleZone o = (SimpleZone)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            StrategyMonthInfoDAO ps = IsisFishDAOHelper.getStrategyMonthInfoDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                StrategyMonthInfo o = (StrategyMonthInfo)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            StrategyDAO ps = IsisFishDAOHelper.getStrategyDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Strategy o = (Strategy)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            TargetSpeciesDAO ps = IsisFishDAOHelper.getTargetSpeciesDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                TargetSpecies o = (TargetSpecies)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            TimeUnitDAO ps = IsisFishDAOHelper.getTimeUnitDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                TimeUnit o = (TimeUnit)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            TripTypeDAO ps = IsisFishDAOHelper.getTripTypeDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                TripType o = (TripType)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            VesselTypeDAO ps = IsisFishDAOHelper.getVesselTypeDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                VesselType o = (VesselType)i.next();
+                ps.delete(o);
+            }
+        }
+        {
+            ZoneDAO ps = IsisFishDAOHelper.getZoneDAO(context);
+            Collection list = ps.findAll();
+            for(Iterator i=list.iterator(); i.hasNext();){
+                Zone o = (Zone)i.next();
+                ps.delete(o);
+            }
+        }
+        context.rollbackTransaction();
+    }
+    */
+} // Persistence
+

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/entity/PopulationSeasonInfoTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/entity/PopulationSeasonInfoTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/entity/PopulationSeasonInfoTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -39,6 +39,8 @@
 import org.codelutin.math.matrix.gui.MatrixPanelEditor;
 import org.junit.Test;
 
+import fr.ifremer.isisfish.AbstractIsisFishTest;
+
 /**
  * PopulationSeasonInfoTest.
  *
@@ -50,14 +52,15 @@
  * Last update: $Date$
  * by : $Author$
  */
-public class PopulationSeasonInfoTest{
-    
+public class PopulationSeasonInfoTest extends AbstractIsisFishTest {
+
     /** Logger for this class */
-    private static final Log log = LogFactory.getLog(PopulationSeasonInfoTest.class);
-    
+    private static final Log log = LogFactory
+            .getLog(PopulationSeasonInfoTest.class);
+
     @Test
     public void testToString() {
-        String [] s = new String[]{"toto", "titi", "tutu"};
+        String[] s = new String[] { "toto", "titi", "tutu" };
         System.out.println(Arrays.toString(s));
     }
 
@@ -73,28 +76,27 @@
 
         List<String> sem = new ArrayList<String>();
 
-        for (int i=0; i<nbrAge; i++) {
-            for (int j=0; j<nbrZone; j++) {
+        for (int i = 0; i < nbrAge; i++) {
+            for (int j = 0; j < nbrZone; j++) {
                 sem.add("g" + i + "/z" + j);
             }
         }
 
-        MatrixND mat = MatrixFactory.getInstance().create(new List[]{sem, sem});
-        for(MatrixIterator mi=mat.iterator(); mi.next();){
-            int [] dim = mi.getCoordinates();
+        MatrixND mat = MatrixFactory.getInstance().create(
+                new List[] { sem, sem });
+        for (MatrixIterator mi = mat.iterator(); mi.next();) {
+            int[] dim = mi.getCoordinates();
             int i = dim[0];
             int j = dim[1];
 
-            if(
-                    // un element de la diagonale dans le block choisi
-                    (i+nbrZone == j)
-                    || // calcul pour savoir s'il y a le groupe plus
+            if (
+            // un element de la diagonale dans le block choisi
+            (i + nbrZone == j) || // calcul pour savoir s'il y a le groupe plus
                     (groupplus
                     // regarde si on est bien dans le dernier block
-                    && (nbrAge-1 == i/nbrZone)
+                            && (nbrAge - 1 == i / nbrZone)
                     // regarde si on est bien sur la diagonal
-                    && (i == j))
-                ){
+                    && (i == j))) {
                 mi.setValue(1);
             }
         }
@@ -106,12 +108,14 @@
             SwingUtilities.invokeLater(new Runnable() {
                 @Override
                 public void run() {
-                    
-                        JOptionPane.showMessageDialog(dialog, panel,_("Spacialized visualisation"), JOptionPane.INFORMATION_MESSAGE);
-                    
+
+                    JOptionPane.showMessageDialog(dialog, panel,
+                            _("Spacialized visualisation"),
+                            JOptionPane.INFORMATION_MESSAGE);
+
                 }
             });
-        
+
             Thread t = new Thread(new Runnable() {
                 public void run() {
                     try {
@@ -123,12 +127,12 @@
                 }
             });
             t.start();
-    
+
             // it would really be nice to wait the thread, otherwise the test
             // means nothing!!!
             t.join();
         } catch (HeadlessException he) {
-            if(log.isErrorEnabled()) {
+            if (log.isErrorEnabled()) {
                 log.error("No X11 display available", he);
             }
         }
@@ -142,31 +146,34 @@
     @Test
     public void testSpacializeLengthChangeMatrix() throws InterruptedException {
 
-
         int nbsecteurs = 2;
         int nbclasses = 3;
 
-        MatrixND mat = MatrixFactory.getInstance().create(new int[]{nbclasses, nbclasses});
-        int i=1;
-        for (MatrixIterator mi=mat.iterator(); mi.next();) {
+        MatrixND mat = MatrixFactory.getInstance().create(
+                new int[] { nbclasses, nbclasses });
+        int i = 1;
+        for (MatrixIterator mi = mat.iterator(); mi.next();) {
             mi.setValue(i++);
         }
 
         List<String> sem = new ArrayList<String>();
 
-        for (i=0; i<nbclasses; i++) {
-            for (int j=0; j<nbsecteurs; j++) {
+        for (i = 0; i < nbclasses; i++) {
+            for (int j = 0; j < nbsecteurs; j++) {
                 sem.add("g" + i + "/z" + j);
             }
         }
 
-        MatrixND bigmat = MatrixFactory.getInstance().create(new List[]{sem, sem});
+        MatrixND bigmat = MatrixFactory.getInstance().create(
+                new List[] { sem, sem });
 
-        for(i=0; i<nbclasses; i++){
-            for(int j=0; j<nbclasses; j++){
-                MatrixND matId = MatrixFactory.getInstance().matrixId(nbsecteurs);
-                matId.mults(mat.getValue(i,j));
-                bigmat.paste(new int[]{i*nbsecteurs, j*nbsecteurs}, matId);
+        for (i = 0; i < nbclasses; i++) {
+            for (int j = 0; j < nbclasses; j++) {
+                MatrixND matId = MatrixFactory.getInstance().matrixId(
+                        nbsecteurs);
+                matId.mults(mat.getValue(i, j));
+                bigmat.paste(new int[] { i * nbsecteurs, j * nbsecteurs },
+                        matId);
             }
         }
 
@@ -184,12 +191,14 @@
             SwingUtilities.invokeLater(new Runnable() {
                 @Override
                 public void run() {
-                    
-                        JOptionPane.showMessageDialog(dialog, box, _("Spacialized visualisation"), JOptionPane.INFORMATION_MESSAGE);
-                    
+
+                    JOptionPane.showMessageDialog(dialog, box,
+                            _("Spacialized visualisation"),
+                            JOptionPane.INFORMATION_MESSAGE);
+
                 }
             });
-    
+
             Thread t = new Thread(new Runnable() {
                 public void run() {
                     try {
@@ -201,12 +210,12 @@
                 }
             });
             t.start();
-    
+
             // it would really be nice to wait the thread, otherwise the test
             // means nothing!!!
             t.join();
         } catch (HeadlessException he) {
-            if(log.isErrorEnabled()) {
+            if (log.isErrorEnabled()) {
                 log.error("No X11 display available", he);
             }
         }

Copied: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/LoggerHelper.java (from rev 2214, isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/TestUtil.java)
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/LoggerHelper.java	                        (rev 0)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/LoggerHelper.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -0,0 +1,413 @@
+/* *##%
+ * Copyright (C) 2009 Code Lutin
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 2
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.
+ *##%*/
+
+package fr.ifremer.isisfish.logging;
+
+import java.io.BufferedWriter;
+import java.io.File;
+import java.io.FileWriter;
+import java.io.IOException;
+import java.io.UnsupportedEncodingException;
+
+import org.apache.commons.logging.Log;
+import org.apache.commons.logging.LogFactory;
+import org.codelutin.util.StringUtil;
+
+/**
+ * Usefull methods for tests.
+ *
+ * @author chemit
+ */
+public abstract class LoggerHelper {
+
+    public static String filename;
+    public static long MEGA_STREAM_SIZE = 6 * 100000;
+    private static long totalPause;
+
+    protected static final Log log = LogFactory.getLog(LoggerHelper.class);
+
+    public static void createMock(File testDir, String filename, int i) throws IOException, InterruptedException {
+        LoggerHelper.MEGA_STREAM_SIZE = 6 * i;
+        LoggerHelper.filename = new File(testDir, filename).getAbsolutePath();
+        File file = new File(testDir, filename);
+        long t0 = System.nanoTime();
+        mockLogFile();
+        long t1;
+
+        t1 = System.nanoTime();
+        log.info("create [" + LoggerHelper.MEGA_STREAM_SIZE + "] in " + StringUtil.convertTime(t1 - t0) + " [file: " + file + ", length: " + StringUtil.convertMemory(file.length()) + "]");
+        System.gc();
+    }
+
+    static void pause(long time) throws InterruptedException {
+        Thread.sleep(time);
+        totalPause += time;
+        System.gc();
+    }
+
+    /**
+     * create a mock of logEvents
+     *
+     * @throws java.io.IOException  todo
+     * @throws InterruptedException todo
+     */
+    public static void mockLogFile() throws IOException, InterruptedException {
+        File f = new File(filename);
+        if (f.exists()) {
+            f.delete();
+        }
+        BufferedWriter s = new BufferedWriter(new FileWriter(f));
+        int MAX_0 = (int) (MEGA_STREAM_SIZE / 6);
+        int i = 0;
+        long t0, t00;
+        long t1;
+        totalPause = 0;
+        t00 = System.currentTimeMillis();
+        t0 = System.currentTimeMillis();
+        try {
+
+            for (i = 0; i < MAX_0; i++) {
+                LogRecord record = LogRecord.newInstance(LogLevel.FATAL, 0, i + "debug ", "ioreiovrio veuio vreupo xz xe opiu tep uxr u ", "xeoiujoiz xpo puoi rui hp", i, new String[0]);
+                s.write(record.toString() + '\n');
+                s.flush();
+            }
+
+            t1 = System.currentTimeMillis();
+            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
+            //pause(500);
+            t0 = System.currentTimeMillis();
+
+            for (i = MAX_0; i < 2 * MAX_0; i++) {
+                LogRecord record = LogRecord.newInstance(LogLevel.WARN, 0, i + " warn", "jkljfdjkl fdkjlkj lkjdlkfjl dfkljl dflkfdj lfdjlk fjdlkj fdl", "vmfof o rieipk?prj,anklvndfkljn gmlrtsoijrmoig", i, new String[0]);
+                s.write(record.toString() + '\n');
+            }
+            t1 = System.currentTimeMillis();
+            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
+            //pause(500);
+            t0 = System.currentTimeMillis();
+            for (i = 2 * MAX_0; i < 3 * MAX_0; i++) {
+                LogRecord record = LogRecord.newInstance(LogLevel.INFO, 0, i + " info", "grlgjlrmgr  jglerj mgrjm  gre pjkogremoiqp   jgpo rejopigjrej,m", "grkgherjfezoprjgbpdofajhlbnb;k nfkfjgmjmsg", i, new String[0]);
+                s.write(record.toString() + '\n');
+            }
+            t1 = System.currentTimeMillis();
+            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
+            //pause(500);
+            t0 = System.currentTimeMillis();
+            for (i = 3 * MAX_0; i < 4 * MAX_0; i++) {
+                LogRecord record = LogRecord.newInstance(LogLevel.DEBUG, 0, i + " debug", "grmgjueroijiorehjnjodj j gn mbr,nhltrhjjdo jp joi   jreio j", "gezoeteroiyerphehkzb,fgbd bcmsherkgheiusbcjkdvberb ", i, new String[0]);
+                s.write(record.toString() + '\n');
+                s.flush();
+            }
+            t1 = System.currentTimeMillis();
+            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
+            //pause(500);
+            t0 = System.currentTimeMillis();
+            for (i = 4 * MAX_0; i < 5 * MAX_0; i++) {
+                LogRecord record = LogRecord.newInstance(LogLevel.TRACE, 0, i + " trace", "ffgkdhvlsdknjk   eriopgejo ipjiropj i io poi opijgr pe jupoieruj ga geigerihpi oeop erp ", "griofeioteogbbekjbnrjemk prejrlmekhgrehivbn   rekhgrhi ", i, new String[0]);
+                s.write(record.toString() + '\n');
+            }
+            t1 = System.currentTimeMillis();
+            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
+            //pause(500);
+            t0 = System.currentTimeMillis();
+            for (i = 5 * MAX_0; i < 6 * MAX_0; i++) {
+                LogRecord record = LogRecord.newInstance(LogLevel.TRACE, 0, i + " user", "grekgrhze t  e re klgre ge rgre gre gfer g rjyukj yujty reez ze fz", "gekfhezh zhrze hgerhglkrej ljbvkxdfn df,ekgrrnvkmn", i, new String[0]);
+                s.write(record.toString() + '\n');
+                s.flush();
+            }
+            t1 = System.currentTimeMillis();
+            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
+        } catch (OutOfMemoryError e) {
+            t1 = System.currentTimeMillis();
+            log.info("failed after | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
+            e.printStackTrace();
+        } finally {
+            if (s != null) {
+                s.flush();
+                s.close();
+            }
+        }
+    }
+
+    /**
+     * create a mock of logEvents
+     *
+     * @throws java.io.IOException  todo
+     * @throws InterruptedException todo
+     */
+    public static void mockLogFile2() throws IOException, InterruptedException {
+        File f = new File(filename);
+        if (f.exists()) {
+            f.delete();
+        }
+        BufferedWriter s = new BufferedWriter(new FileWriter(f));
+        int MAX_0 = (int) (MEGA_STREAM_SIZE / 6);
+        int i = 0;
+        long t0, t00;
+        long t1;
+        totalPause = 0;
+        t00 = System.currentTimeMillis();
+        t0 = System.currentTimeMillis();
+        try {
+
+            for (i = 0; i < MAX_0; i++) {
+                LogRecord record = LogRecord.newInstance(LogLevel.FATAL, 0, i + "debug ", "ioreiovrio veuio vreupo xz xe opiu tep uxr u ", "xeoiujoiz xpo puoi rui hp", i, new String[0]);
+                s.write(record.toString() + '\n');
+                s.flush();
+            }
+
+            t1 = System.currentTimeMillis();
+            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
+            //pause(500);
+            t0 = System.currentTimeMillis();
+
+            for (i = MAX_0; i < 2 * MAX_0; i++) {
+                LogRecord record = LogRecord.newInstance(LogLevel.WARN, 0, i + " warn", "jkljfdjkl fdkjlkj lkjdlkfjl dfkljl dflkfdj lfdjlk fjdlkj fdl", "vmfof o rieipk?prj,ùnklvndfkljn gmlrtsoîjrmoig", i, new String[0]);
+                s.write(record.toString() + '\n');
+            }
+            t1 = System.currentTimeMillis();
+            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
+            //pause(500);
+            t0 = System.currentTimeMillis();
+            for (i = 2 * MAX_0; i < 3 * MAX_0; i++) {
+                LogRecord record = LogRecord.newInstance(LogLevel.INFO, 0, i + " info", "grlgjlrmgr  jglerj mgrjm  gre pjkogremoiqp   jgpo rejopigjrej,m", "grkgherjfezoprjgbpdofùjhlbnb;k nfkfjgmjmsg", i, new String[0]);
+                s.write(record.toString() + '\n');
+            }
+            t1 = System.currentTimeMillis();
+            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
+            //pause(500);
+            t0 = System.currentTimeMillis();
+            for (i = 3 * MAX_0; i < 4 * MAX_0; i++) {
+                LogRecord record = LogRecord.newInstance(LogLevel.DEBUG, 0, i + " debug", "grmgjueroijiorehjnjodj j gn mbr,nhltrhjjdo jp joi   jreio j", "gezoeteroiyerphehkzb,fgbd bcmsherkgheiusbcjkdvberb ", i, new String[0]);
+                s.write(record.toString() + '\n');
+                s.flush();
+            }
+            t1 = System.currentTimeMillis();
+            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
+            //pause(500);
+            t0 = System.currentTimeMillis();
+            for (i = 4 * MAX_0; i < 5 * MAX_0; i++) {
+                LogRecord record = LogRecord.newInstance(LogLevel.TRACE, 0, i + " trace", "ffgkdhvlsdknjk   eriopgejo ipjiropj i io poi opijgr pe jupoieruj g'^ geigerihpi oeop erp ", "griofeioteogbbekjbnrjemk çprejrlmekhgrehivbn   rekhgrhi ", i, new String[0]);
+                s.write(record.toString() + '\n');
+            }
+            t1 = System.currentTimeMillis();
+            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
+            //pause(500);
+            t0 = System.currentTimeMillis();
+            for (i = 5 * MAX_0; i < 6 * MAX_0; i++) {
+                LogRecord record = LogRecord.newInstance(LogLevel.TRACE, 0, i + " user", "grekgrhze t  e re klgre ge rgre gre gfer g rjyukj yujty reez ze fz", "gekfhezh zhrze hgerhglkrej ljbvkxdfn df,ekgrrnvkmn", i, new String[0]);
+                s.write(record.toString() + '\n');
+                s.flush();
+            }
+            t1 = System.currentTimeMillis();
+            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
+        } catch (OutOfMemoryError e) {
+            t1 = System.currentTimeMillis();
+            log.info("failed after | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
+            e.printStackTrace();
+        } finally {
+            if (s != null) {
+                s.flush();
+                s.close();
+            }
+        }
+    }
+
+    /**
+     * This is a log record (says an entry of a log file). This is abstracted from any
+     * logging implementation.
+     * <p/>
+     * To deal with log, we don't use string version stored in original log file,
+     * prefer use serialized form of a LogRecord : we keep a lot of time when using
+     * them to display them in ui, and for filtering process too.
+     * <p/>
+     * The LogRecord unicity is base on two properties :
+     * <ul>
+     * <li>timestamp</li>
+     * <li>message</li>
+     * </ul>
+     * <p/>
+     * We can not use only timestamp, more than one event could appear in a same
+     * timestamp.
+     * <p/>
+     * TODO Put this code in lutinLog ?
+     *
+     * @author chemit
+     */
+    public static class LogRecord implements java.io.Serializable {
+
+        /** the time of the event */
+        protected long timeStamp;
+
+        /** the msg for the event */
+        protected String message;
+
+        /** the severity of the event */
+        protected int level;
+
+        /** the throwable details the event */
+        protected String[] throwableStrRep;
+
+        /** origin filename of the event */
+        //protected transient String filename;
+
+        /** origin method name of the event */
+        //protected transient String methodName;
+
+        /** origin line number of the event */
+        //protected transient int lineNumber;
+
+        /**
+         * the string represention of logEvent, transient since we use a lazy getter
+         * we don't need to store it.
+         * <p/>
+         * <b>(if not transient : double the size of serialized form...)</b>
+         */
+        protected transient String text;
+
+        /**
+         * the offset of logRecord in stream.
+         * <p/>
+         * This is a transient property, since we compute this value when getting
+         * the LogRecord from stream
+         */
+        protected transient long offset;
+
+        private static final long serialVersionUID = 1335077740059488080L;
+
+        public static LogRecord newInstance(LogLevel level,
+                                            long timestamp,
+                                            String message,
+                                            String fileName,
+                                            String methodName,
+                                            int lineNumber,
+                                            String[] errors) throws UnsupportedEncodingException {
+            return new LogRecord(
+                    level == null ? LogLevel.DEBUG.ordinal() : level.ordinal(),
+                    timestamp,
+                    message,
+                    fileName,
+                    methodName,
+                    lineNumber,
+                    errors
+            );
+        }
+
+        protected LogRecord(int level,
+                            long timestamp,
+                            String message,
+                            String filename,
+                            String methodName,
+                            int lineNumber,
+                            String[] throwableStrRep) throws UnsupportedEncodingException {
+            this.level = level;
+            this.timeStamp = timestamp;
+            //this.message = message;
+            this.message = new String((filename + ":" + lineNumber + " - " + methodName + " - " + message).getBytes("utf-8"));
+            //this.filename = filename;
+            //this.methodName = methodName;
+            //this.lineNumber = lineNumber;
+            this.throwableStrRep = throwableStrRep;
+        }
+
+        public String getMessage() {
+            return message;
+        }
+
+        public int getLevel() {
+            return level;
+        }
+
+        public String[] getThrowableStrRep() {
+            return throwableStrRep;
+        }
+
+        public long getTimeStamp() {
+            return timeStamp;
+        }
+
+        public int getLineNumber() {
+            return 0;
+            //return lineNumber;
+        }
+
+        public String getMethodName() {
+            return "";
+            //return methodName;
+        }
+
+        public long getOffset() {
+            return offset;
+        }
+
+        public void setOffset(long offset) {
+            this.offset = offset;
+        }
+
+        /**
+         * We use a cache for the representation since we will use a lots of time.
+         *
+         * @return the String representation used to display logEvent in ui.
+         */
+        @Override
+        public String toString() {
+            if (text == null) {
+                text = new StringBuilder(LogLevel.getLogLevel(level).toString()).
+                        append(' ').append(message).toString();
+            }
+            /*if (text == null) {
+                text = new StringBuilder().append(LogLevel.getSimulLogLevel(level)).
+                        append(' ').append(filename).append(':').
+                        append(lineNumber).append(" - ").
+                        append(methodName).append(" - ").append(message).toString();
+            }*/
+            return text;
+        }
+
+        /**
+         * We base the identiy of a LogEvent on the message, level and timestamp
+         *
+         * @param o object to compare
+         * @return <code>true</code> if same object
+         */
+
+        @Override
+        public boolean equals(Object o) {
+            if (this == o) {
+                return true;
+            }
+            if (o == null || getClass() != o.getClass()) {
+                return false;
+            }
+
+            LogRecord event = (LogRecord) o;
+            return timeStamp == event.timeStamp &&
+                    !(message != null ? !message.equals(event.message) :
+                            event.message != null);
+        }
+
+        @Override
+        public int hashCode() {
+            int result;
+            result = (int) (timeStamp ^ (timeStamp >>> 32));
+            result = 31 * result + (message != null ? message.hashCode() : 0);
+            return result;
+        }
+
+    }
+}

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/SimulationLoggerUtilTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/SimulationLoggerUtilTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/SimulationLoggerUtilTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -1,20 +1,39 @@
+/* *##%
+ * Copyright (C) 2009 Code Lutin
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 2
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.
+ *##%*/
+
 package fr.ifremer.isisfish.logging;
 
+import java.io.File;
+import java.util.ArrayList;
+import java.util.List;
 
-import fr.ifremer.TestUtils;
 import junit.framework.Assert;
-import junit.framework.TestCase;
+
 import org.apache.commons.logging.Log;
 import org.apache.commons.logging.LogFactory;
 import org.apache.log4j.Level;
 import org.apache.log4j.Logger;
 import org.codelutin.util.FileUtil;
+import org.junit.Test;
 
-import java.io.File;
-import java.util.ArrayList;
-import java.util.List;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 
-public class SimulationLoggerUtilTest extends TestCase {
+public class SimulationLoggerUtilTest extends AbstractIsisFishTest {
 
     static private final String category = "fr.ifremer.isisfish.logging";
 
@@ -22,10 +41,9 @@
 
     static private Log log = LogFactory.getLog(category);
 
+    @Test
     public void testSimulationLoggerInfo() throws Exception {
 
-        TestUtil.IsisStart();
-
         Log logInit = LogFactory.getLog(appenderId);
         Log logInit2 = LogFactory.getLog(appenderId + ".hip");
 
@@ -44,7 +62,7 @@
         Level hibernateLogLevel = hibernatelog.getLevel();
 
 
-        String loggerFile = new File(TestUtils.getTargetdir(), SimulationLoggerUtilTest.class.getSimpleName() + "_" + System.nanoTime() + ".log").getAbsolutePath();
+        String loggerFile = new File(getTargetdir(), SimulationLoggerUtilTest.class.getSimpleName() + "_" + System.nanoTime() + ".log").getAbsolutePath();
         System.out.println(">>>> loggerFile " + loggerFile);
 
         // todo do a test for addSimulationAppender too!
@@ -58,7 +76,7 @@
         );
 
         // check hibernate level was not changed
-        assertEquals(hibernateLogLevel, Logger.getLogger("org.hibernate").getLevel());
+        Assert.assertEquals(hibernateLogLevel, Logger.getLogger("org.hibernate").getLevel());
         final Log logger = LogFactory.getLog(appenderId);
 
 
@@ -92,7 +110,7 @@
         // it would really be nice to wait the thread, otherwise the test
         // means nothing!!!
         t.join();
-        assertTrue(!t.isAlive());
+        Assert.assertTrue(!t.isAlive());
         SimulationLoggerUtil.removeSimulationAppender(appenderId);
 
         message = "appender was destoyed WE MUST NOT SEE this message in simulation log file!!!";
@@ -128,10 +146,9 @@
 
     }
 
+    @Test
     public void testSimulationLoggerDebug() throws Exception {
 
-        TestUtil.IsisStart();
-
         Log logInit = LogFactory.getLog(appenderId);
         Log logInit2 = LogFactory.getLog(appenderId + ".hip");
 
@@ -162,7 +179,7 @@
         );
 
         // check hibernate level was not changed
-        assertEquals(hibernateLogLevel, Logger.getLogger("org.hibernate").getLevel());
+        Assert.assertEquals(hibernateLogLevel, Logger.getLogger("org.hibernate").getLevel());
         final Log logger = LogFactory.getLog(appenderId);
 
 
@@ -196,7 +213,7 @@
         // it would really be nice to wait the thread, otherwise the test
         // means nothing!!!
         t.join();
-        assertTrue(!t.isAlive());
+        Assert.assertTrue(!t.isAlive());
         SimulationLoggerUtil.removeSimulationAppender(appenderId);
 
         message = "appender was destoyed WE MUST NOT SEE this message in simulation log file!!!";

Deleted: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/TestUtil.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/TestUtil.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/TestUtil.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -1,408 +0,0 @@
-package fr.ifremer.isisfish.logging;
-
-import fr.ifremer.TestUtils;
-import org.apache.commons.logging.Log;
-import org.apache.commons.logging.LogFactory;
-import org.codelutin.log.LutinLogFactory;
-import org.codelutin.util.StringUtil;
-
-import java.io.BufferedWriter;
-import java.io.File;
-import java.io.FileWriter;
-import java.io.IOException;
-import java.io.UnsupportedEncodingException;
-
-/**
- * Usefull methods for tests.
- *
- * @author chemit
- */
-
-public abstract class TestUtil {
-
-    public static String filename;
-    public static long MEGA_STREAM_SIZE = 6 * 100000;
-    private static long totalPause;
-
-    protected static final Log log = LogFactory.getLog(TestUtil.class);
-
-    public static void createMock(File testDir, String filename, int i) throws IOException, InterruptedException {
-        TestUtil.MEGA_STREAM_SIZE = 6 * i;
-        TestUtil.filename = new File(testDir, filename).getAbsolutePath();
-        File file = new File(testDir, filename);
-        long t0 = System.nanoTime();
-        mockLogFile();
-        long t1;
-
-        t1 = System.nanoTime();
-        log.info("create [" + TestUtil.MEGA_STREAM_SIZE + "] in " + StringUtil.convertTime(t1 - t0) + " [file: " + file + ", length: " + StringUtil.convertMemory(file.length()) + "]");
-        System.gc();
-    }
-
-    static void pause(long time) throws InterruptedException {
-        Thread.sleep(time);
-        totalPause += time;
-        System.gc();
-    }
-
-    /**
-     * create a mock of logEvents
-     *
-     * @throws java.io.IOException  todo
-     * @throws InterruptedException todo
-     */
-    public static void mockLogFile() throws IOException, InterruptedException {
-        File f = new File(filename);
-        if (f.exists()) {
-            f.delete();
-        }
-        BufferedWriter s = new BufferedWriter(new FileWriter(f));
-        int MAX_0 = (int) (MEGA_STREAM_SIZE / 6);
-        int i = 0;
-        long t0, t00;
-        long t1;
-        totalPause = 0;
-        t00 = System.currentTimeMillis();
-        t0 = System.currentTimeMillis();
-        try {
-
-            for (i = 0; i < MAX_0; i++) {
-                LogRecord record = LogRecord.newInstance(LogLevel.FATAL, 0, i + "debug ", "ioreiovrio veuio vreupo xz xe opiu tep uxr u ", "xeoiujoiz xpo puoi rui hp", i, new String[0]);
-                s.write(record.toString() + '\n');
-                s.flush();
-            }
-
-            t1 = System.currentTimeMillis();
-            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
-            //pause(500);
-            t0 = System.currentTimeMillis();
-
-            for (i = MAX_0; i < 2 * MAX_0; i++) {
-                LogRecord record = LogRecord.newInstance(LogLevel.WARN, 0, i + " warn", "jkljfdjkl fdkjlkj lkjdlkfjl dfkljl dflkfdj lfdjlk fjdlkj fdl", "vmfof o rieipk?prj,anklvndfkljn gmlrtsoijrmoig", i, new String[0]);
-                s.write(record.toString() + '\n');
-            }
-            t1 = System.currentTimeMillis();
-            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
-            //pause(500);
-            t0 = System.currentTimeMillis();
-            for (i = 2 * MAX_0; i < 3 * MAX_0; i++) {
-                LogRecord record = LogRecord.newInstance(LogLevel.INFO, 0, i + " info", "grlgjlrmgr  jglerj mgrjm  gre pjkogremoiqp   jgpo rejopigjrej,m", "grkgherjfezoprjgbpdofajhlbnb;k nfkfjgmjmsg", i, new String[0]);
-                s.write(record.toString() + '\n');
-            }
-            t1 = System.currentTimeMillis();
-            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
-            //pause(500);
-            t0 = System.currentTimeMillis();
-            for (i = 3 * MAX_0; i < 4 * MAX_0; i++) {
-                LogRecord record = LogRecord.newInstance(LogLevel.DEBUG, 0, i + " debug", "grmgjueroijiorehjnjodj j gn mbr,nhltrhjjdo jp joi   jreio j", "gezoeteroiyerphehkzb,fgbd bcmsherkgheiusbcjkdvberb ", i, new String[0]);
-                s.write(record.toString() + '\n');
-                s.flush();
-            }
-            t1 = System.currentTimeMillis();
-            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
-            //pause(500);
-            t0 = System.currentTimeMillis();
-            for (i = 4 * MAX_0; i < 5 * MAX_0; i++) {
-                LogRecord record = LogRecord.newInstance(LogLevel.TRACE, 0, i + " trace", "ffgkdhvlsdknjk   eriopgejo ipjiropj i io poi opijgr pe jupoieruj ga geigerihpi oeop erp ", "griofeioteogbbekjbnrjemk prejrlmekhgrehivbn   rekhgrhi ", i, new String[0]);
-                s.write(record.toString() + '\n');
-            }
-            t1 = System.currentTimeMillis();
-            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
-            //pause(500);
-            t0 = System.currentTimeMillis();
-            for (i = 5 * MAX_0; i < 6 * MAX_0; i++) {
-                LogRecord record = LogRecord.newInstance(LogLevel.TRACE, 0, i + " user", "grekgrhze t  e re klgre ge rgre gre gfer g rjyukj yujty reez ze fz", "gekfhezh zhrze hgerhglkrej ljbvkxdfn df,ekgrrnvkmn", i, new String[0]);
-                s.write(record.toString() + '\n');
-                s.flush();
-            }
-            t1 = System.currentTimeMillis();
-            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
-        } catch (OutOfMemoryError e) {
-            t1 = System.currentTimeMillis();
-            log.info("failed after | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
-            e.printStackTrace();
-        } finally {
-            if (s != null) {
-                s.flush();
-                s.close();
-            }
-        }
-    }
-
-    /**
-     * create a mock of logEvents
-     *
-     * @throws java.io.IOException  todo
-     * @throws InterruptedException todo
-     */
-    public static void mockLogFile2() throws IOException, InterruptedException {
-        File f = new File(filename);
-        if (f.exists()) {
-            f.delete();
-        }
-        BufferedWriter s = new BufferedWriter(new FileWriter(f));
-        int MAX_0 = (int) (MEGA_STREAM_SIZE / 6);
-        int i = 0;
-        long t0, t00;
-        long t1;
-        totalPause = 0;
-        t00 = System.currentTimeMillis();
-        t0 = System.currentTimeMillis();
-        try {
-
-            for (i = 0; i < MAX_0; i++) {
-                LogRecord record = LogRecord.newInstance(LogLevel.FATAL, 0, i + "debug ", "ioreiovrio veuio vreupo xz xe opiu tep uxr u ", "xeoiujoiz xpo puoi rui hp", i, new String[0]);
-                s.write(record.toString() + '\n');
-                s.flush();
-            }
-
-            t1 = System.currentTimeMillis();
-            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
-            //pause(500);
-            t0 = System.currentTimeMillis();
-
-            for (i = MAX_0; i < 2 * MAX_0; i++) {
-                LogRecord record = LogRecord.newInstance(LogLevel.WARN, 0, i + " warn", "jkljfdjkl fdkjlkj lkjdlkfjl dfkljl dflkfdj lfdjlk fjdlkj fdl", "vmfof o rieipk?prj,ùnklvndfkljn gmlrtsoîjrmoig", i, new String[0]);
-                s.write(record.toString() + '\n');
-            }
-            t1 = System.currentTimeMillis();
-            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
-            //pause(500);
-            t0 = System.currentTimeMillis();
-            for (i = 2 * MAX_0; i < 3 * MAX_0; i++) {
-                LogRecord record = LogRecord.newInstance(LogLevel.INFO, 0, i + " info", "grlgjlrmgr  jglerj mgrjm  gre pjkogremoiqp   jgpo rejopigjrej,m", "grkgherjfezoprjgbpdofùjhlbnb;k nfkfjgmjmsg", i, new String[0]);
-                s.write(record.toString() + '\n');
-            }
-            t1 = System.currentTimeMillis();
-            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
-            //pause(500);
-            t0 = System.currentTimeMillis();
-            for (i = 3 * MAX_0; i < 4 * MAX_0; i++) {
-                LogRecord record = LogRecord.newInstance(LogLevel.DEBUG, 0, i + " debug", "grmgjueroijiorehjnjodj j gn mbr,nhltrhjjdo jp joi   jreio j", "gezoeteroiyerphehkzb,fgbd bcmsherkgheiusbcjkdvberb ", i, new String[0]);
-                s.write(record.toString() + '\n');
-                s.flush();
-            }
-            t1 = System.currentTimeMillis();
-            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
-            //pause(500);
-            t0 = System.currentTimeMillis();
-            for (i = 4 * MAX_0; i < 5 * MAX_0; i++) {
-                LogRecord record = LogRecord.newInstance(LogLevel.TRACE, 0, i + " trace", "ffgkdhvlsdknjk   eriopgejo ipjiropj i io poi opijgr pe jupoieruj g'^ geigerihpi oeop erp ", "griofeioteogbbekjbnrjemk çprejrlmekhgrehivbn   rekhgrhi ", i, new String[0]);
-                s.write(record.toString() + '\n');
-            }
-            t1 = System.currentTimeMillis();
-            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
-            //pause(500);
-            t0 = System.currentTimeMillis();
-            for (i = 5 * MAX_0; i < 6 * MAX_0; i++) {
-                LogRecord record = LogRecord.newInstance(LogLevel.TRACE, 0, i + " user", "grekgrhze t  e re klgre ge rgre gre gfer g rjyukj yujty reez ze fz", "gekfhezh zhrze hgerhglkrej ljbvkxdfn df,ekgrrnvkmn", i, new String[0]);
-                s.write(record.toString() + '\n');
-                s.flush();
-            }
-            t1 = System.currentTimeMillis();
-            log.debug("create next [" + MAX_0 + "] in " + StringUtil.convertTime(t1 - t0) + " | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
-        } catch (OutOfMemoryError e) {
-            t1 = System.currentTimeMillis();
-            log.info("failed after | total " + i + " in " + StringUtil.convertTime(t1 - totalPause - t00));
-            e.printStackTrace();
-        } finally {
-            if (s != null) {
-                s.flush();
-                s.close();
-            }
-        }
-    }
-
-    public static void IsisStart() {
-        System.setProperty("org.apache.commons.logging.LogFactory",
-                LutinLogFactory.class.getName());
-        try {
-            TestUtils.init();
-        } catch (Exception e) {
-            throw new RuntimeException(e);
-        }
-    }
-
-    /**
-     * This is a log record (says an entry of a log file). This is abstracted from any
-     * logging implementation.
-     * <p/>
-     * To deal with log, we don't use string version stored in original log file,
-     * prefer use serialized form of a LogRecord : we keep a lot of time when using
-     * them to display them in ui, and for filtering process too.
-     * <p/>
-     * The LogRecord unicity is base on two properties :
-     * <ul>
-     * <li>timestamp</li>
-     * <li>message</li>
-     * </ul>
-     * <p/>
-     * We can not use only timestamp, more than one event could appear in a same
-     * timestamp.
-     * <p/>
-     * TODO Put this code in lutinLog ?
-     *
-     * @author chemit
-     */
-    public static class LogRecord implements java.io.Serializable {
-
-        /** the time of the event */
-        protected long timeStamp;
-
-        /** the msg for the event */
-        protected String message;
-
-        /** the severity of the event */
-        protected int level;
-
-        /** the throwable details the event */
-        protected String[] throwableStrRep;
-
-        /** origin filename of the event */
-        //protected transient String filename;
-
-        /** origin method name of the event */
-        //protected transient String methodName;
-
-        /** origin line number of the event */
-        //protected transient int lineNumber;
-
-        /**
-         * the string represention of logEvent, transient since we use a lazy getter
-         * we don't need to store it.
-         * <p/>
-         * <b>(if not transient : double the size of serialized form...)</b>
-         */
-        protected transient String text;
-
-        /**
-         * the offset of logRecord in stream.
-         * <p/>
-         * This is a transient property, since we compute this value when getting
-         * the LogRecord from stream
-         */
-        protected transient long offset;
-
-        private static final long serialVersionUID = 1335077740059488080L;
-
-        public static LogRecord newInstance(LogLevel level,
-                                            long timestamp,
-                                            String message,
-                                            String fileName,
-                                            String methodName,
-                                            int lineNumber,
-                                            String[] errors) throws UnsupportedEncodingException {
-            return new LogRecord(
-                    level == null ? LogLevel.DEBUG.ordinal() : level.ordinal(),
-                    timestamp,
-                    message,
-                    fileName,
-                    methodName,
-                    lineNumber,
-                    errors
-            );
-        }
-
-        protected LogRecord(int level,
-                            long timestamp,
-                            String message,
-                            String filename,
-                            String methodName,
-                            int lineNumber,
-                            String[] throwableStrRep) throws UnsupportedEncodingException {
-            this.level = level;
-            this.timeStamp = timestamp;
-            //this.message = message;
-            this.message = new String((filename + ":" + lineNumber + " - " + methodName + " - " + message).getBytes("utf-8"));
-            //this.filename = filename;
-            //this.methodName = methodName;
-            //this.lineNumber = lineNumber;
-            this.throwableStrRep = throwableStrRep;
-        }
-
-        public String getMessage() {
-            return message;
-        }
-
-        public int getLevel() {
-            return level;
-        }
-
-        public String[] getThrowableStrRep() {
-            return throwableStrRep;
-        }
-
-        public long getTimeStamp() {
-            return timeStamp;
-        }
-
-        public int getLineNumber() {
-            return 0;
-            //return lineNumber;
-        }
-
-        public String getMethodName() {
-            return "";
-            //return methodName;
-        }
-
-        public long getOffset() {
-            return offset;
-        }
-
-        public void setOffset(long offset) {
-            this.offset = offset;
-        }
-
-        /**
-         * We use a cache for the representation since we will use a lots of time.
-         *
-         * @return the String representation used to display logEvent in ui.
-         */
-        @Override
-        public String toString() {
-            if (text == null) {
-                text = new StringBuilder(LogLevel.getLogLevel(level).toString()).
-                        append(' ').append(message).toString();
-            }
-            /*if (text == null) {
-                text = new StringBuilder().append(LogLevel.getSimulLogLevel(level)).
-                        append(' ').append(filename).append(':').
-                        append(lineNumber).append(" - ").
-                        append(methodName).append(" - ").append(message).toString();
-            }*/
-            return text;
-        }
-
-        /**
-         * We base the identiy of a LogEvent on the message, level and timestamp
-         *
-         * @param o object to compare
-         * @return <code>true</code> if same object
-         */
-
-        @Override
-        public boolean equals(Object o) {
-            if (this == o) {
-                return true;
-            }
-            if (o == null || getClass() != o.getClass()) {
-                return false;
-            }
-
-            LogRecord event = (LogRecord) o;
-            return timeStamp == event.timeStamp &&
-                    !(message != null ? !message.equals(event.message) :
-                            event.message != null);
-        }
-
-        @Override
-        public int hashCode() {
-            int result;
-            result = (int) (timeStamp ^ (timeStamp >>> 32));
-            result = 31 * result + (message != null ? message.hashCode() : 0);
-            return result;
-        }
-
-    }
-}

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/io/LineReaderTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/io/LineReaderTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/io/LineReaderTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -1,15 +1,36 @@
+/* *##%
+ * Copyright (C) 2009 Code Lutin
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 2
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.
+ *##%*/
+
 package fr.ifremer.isisfish.logging.io;
 
-import fr.ifremer.TestUtils;
-import fr.ifremer.isisfish.logging.TestUtil;
-import junit.framework.TestCase;
+import java.io.File;
+import java.io.IOException;
+import java.util.Arrays;
+
 import org.apache.commons.logging.Log;
 import org.apache.commons.logging.LogFactory;
 import org.codelutin.util.StringUtil;
+import org.junit.Assert;
+import org.junit.Before;
+import org.junit.Test;
 
-import java.io.File;
-import java.io.IOException;
-import java.util.Arrays;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
+import fr.ifremer.isisfish.logging.LoggerHelper;
 
 /**
  * User: tony
@@ -17,11 +38,11 @@
  * Time: 21:41:53
  */
 
-public class LineReaderTest extends TestCase {
+public class LineReaderTest extends AbstractIsisFishTest {
 
     protected static final Log log = LogFactory.getLog(LineReaderTest.class);
 
-    File testDir;
+    protected File testDir;
 
     final static int[] sizes = new int[]{
             10,
@@ -39,51 +60,49 @@
             //2000000
     };
 
-    protected void setUp() throws Exception {
-        super.setUp();
-
-        testDir = new File(TestUtils.getTargetdir(), "bench_" + System.nanoTime());
+    @Before
+    public void setUp() throws Exception {
+        testDir = new File(getTargetdir(), "bench_" + System.nanoTime());
         testDir.mkdirs();
         System.out.println("benchdir " + testDir);
 
     }
 
     protected static void createMock(File testDir, int i) throws IOException, InterruptedException {
-        TestUtil.MEGA_STREAM_SIZE = 6 * i;
-        TestUtil.filename = new File(testDir, LineReaderTest.class.getSimpleName() + "_" + 6 * i + ".log").getAbsolutePath();
-        File file = new File(testDir, TestUtil.filename);
+        LoggerHelper.MEGA_STREAM_SIZE = 6 * i;
+        LoggerHelper.filename = new File(testDir, LineReaderTest.class.getSimpleName() + "_" + 6 * i + ".log").getAbsolutePath();
+        File file = new File(testDir, LoggerHelper.filename);
         long t0 = System.nanoTime();
-        TestUtil.mockLogFile();
+        LoggerHelper.mockLogFile();
         long t1;
 
         t1 = System.nanoTime();
-        log.info("create [" + TestUtil.MEGA_STREAM_SIZE + "] in " + StringUtil.convertTime(t1 - t0) + " [file: " + file + ", length: " + StringUtil.convertMemory(file.length()) + "]");
+        log.info("create [" + LoggerHelper.MEGA_STREAM_SIZE + "] in " + StringUtil.convertTime(t1 - t0) + " [file: " + file + ", length: " + StringUtil.convertMemory(file.length()) + "]");
         System.gc();
     }
 
+    public void testMakeMock() throws Exception {
 
-    public void estMakeMock() throws Exception {
-
         for (int size : sizes) {
             createMock(testDir, size);
         }
     }
 
-    public void estCreateOffsets() throws Exception {
+    public void testCreateOffsets() throws Exception {
 
         for (int size : sizes) {
             createOffset(size);
         }
     }
 
-    public void estGetNbLines() throws Exception {
+    public void testGetNbLines() throws Exception {
 
         for (int size : sizes) {
             getNbLines(size);
         }
     }
 
-    public void estScanAllLines() throws Exception {
+    public void testScanAllLines() throws Exception {
 
         for (int size : sizes) {
             scanAllLines(size * 6);
@@ -94,7 +113,7 @@
 
     }
 
-    public void estScanReverseAllLines() throws Exception {
+    public void testScanReverseAllLines() throws Exception {
 
         for (int size : sizes) {
             scanReverseAllLines(size * 6);
@@ -104,7 +123,7 @@
         }
     }
 
-    public void estScanThenReverseAllLines() throws Exception {
+    public void testScanThenReverseAllLines() throws Exception {
 
         for (int size : sizes) {
             scanThenReverseAllLines(size * 6);
@@ -121,13 +140,13 @@
     }
 
     protected void scanAllLines(int size) throws IOException {
-        TestUtil.MEGA_STREAM_SIZE = size;
-        TestUtil.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + TestUtil.MEGA_STREAM_SIZE + ".log";
-        File file = new File(TestUtil.filename);
+        LoggerHelper.MEGA_STREAM_SIZE = size;
+        LoggerHelper.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + LoggerHelper.MEGA_STREAM_SIZE + ".log";
+        File file = new File(LoggerHelper.filename);
         long t0 = System.currentTimeMillis();
         LineReader t = createReader(file, "offsets");
         t.open();
-        assertEquals(TestUtil.MEGA_STREAM_SIZE, t.getNbLines());
+        Assert.assertEquals(LoggerHelper.MEGA_STREAM_SIZE, t.getNbLines());
         for (int i = 0; i < t.getNbLines(); i++) {
             long offset = t.getOffsetReader().getOffset(i);
             //assertEquals(i,offset);
@@ -148,13 +167,13 @@
     }
 
     protected void scanAllLines(int size, int length) throws IOException {
-        TestUtil.MEGA_STREAM_SIZE = size;
-        TestUtil.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + TestUtil.MEGA_STREAM_SIZE + ".log";
-        File file = new File(TestUtil.filename);
+        LoggerHelper.MEGA_STREAM_SIZE = size;
+        LoggerHelper.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + LoggerHelper.MEGA_STREAM_SIZE + ".log";
+        File file = new File(LoggerHelper.filename);
         long t0 = System.currentTimeMillis();
         LineReader t = createReader(file, "offsets");
         t.open();
-        assertEquals(TestUtil.MEGA_STREAM_SIZE, t.getNbLines());
+        Assert.assertEquals(LoggerHelper.MEGA_STREAM_SIZE, t.getNbLines());
         for (int i = 0; i < t.getNbLines(); i += length) {
             long offset = t.getOffsetReader().getOffset(i);
             //assertEquals(i,offset);
@@ -175,13 +194,13 @@
     }
 
     protected void scanReverseAllLines(int size) throws IOException {
-        TestUtil.MEGA_STREAM_SIZE = size;
-        TestUtil.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + TestUtil.MEGA_STREAM_SIZE + ".log";
-        File file = new File(TestUtil.filename);
+        LoggerHelper.MEGA_STREAM_SIZE = size;
+        LoggerHelper.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + LoggerHelper.MEGA_STREAM_SIZE + ".log";
+        File file = new File(LoggerHelper.filename);
         long t0 = System.currentTimeMillis();
         LineReader t = createReader(file, "offsets");
         t.open();
-        assertEquals(TestUtil.MEGA_STREAM_SIZE, t.getNbLines());
+        Assert.assertEquals(LoggerHelper.MEGA_STREAM_SIZE, t.getNbLines());
         for (int i = 0; i < t.getNbLines(); i += 10) {
             long offset = t.getOffsetReader().getOffset(i);
             //assertEquals(i,offset);
@@ -202,13 +221,13 @@
     }
 
     protected void scanReverseAllLines(int size, int length) throws IOException {
-        TestUtil.MEGA_STREAM_SIZE = size;
-        TestUtil.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + TestUtil.MEGA_STREAM_SIZE + ".log";
-        File file = new File(TestUtil.filename);
+        LoggerHelper.MEGA_STREAM_SIZE = size;
+        LoggerHelper.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + LoggerHelper.MEGA_STREAM_SIZE + ".log";
+        File file = new File(LoggerHelper.filename);
         long t0 = System.currentTimeMillis();
         LineReader t = createReader(file, "offsets");
         t.open();
-        assertEquals(TestUtil.MEGA_STREAM_SIZE, t.getNbLines());
+        Assert.assertEquals(LoggerHelper.MEGA_STREAM_SIZE, t.getNbLines());
         for (int i = 0; i < t.getNbLines(); i += length) {
             long offset = t.getOffsetReader().getOffset(i);
             //assertEquals(i,offset);
@@ -229,13 +248,13 @@
     }
 
     protected void scanThenReverseAllLines(int size) throws IOException {
-        TestUtil.MEGA_STREAM_SIZE = size;
-        TestUtil.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + TestUtil.MEGA_STREAM_SIZE + ".log";
-        File file = new File(TestUtil.filename);
+        LoggerHelper.MEGA_STREAM_SIZE = size;
+        LoggerHelper.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + LoggerHelper.MEGA_STREAM_SIZE + ".log";
+        File file = new File(LoggerHelper.filename);
         long t0 = System.currentTimeMillis();
         LineReader t = createReader(file, "offsets");
         t.open();
-        assertEquals(TestUtil.MEGA_STREAM_SIZE, t.getNbLines());
+        Assert.assertEquals(LoggerHelper.MEGA_STREAM_SIZE, t.getNbLines());
         for (int i = 0; i < t.getNbLines(); i += 10) {
             long offset = t.getOffsetReader().getOffset(i);
             //assertEquals(i,offset);
@@ -254,13 +273,13 @@
     }
 
     protected void scanThenReverseAllLines(int size, int length) throws IOException {
-        TestUtil.MEGA_STREAM_SIZE = size;
-        TestUtil.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + TestUtil.MEGA_STREAM_SIZE + ".log";
-        File file = new File(TestUtil.filename);
+        LoggerHelper.MEGA_STREAM_SIZE = size;
+        LoggerHelper.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + LoggerHelper.MEGA_STREAM_SIZE + ".log";
+        File file = new File(LoggerHelper.filename);
         long t0 = System.currentTimeMillis();
         LineReader t = createReader(file, "offsets");
         t.open();
-        assertEquals(TestUtil.MEGA_STREAM_SIZE, t.getNbLines());
+        Assert.assertEquals(LoggerHelper.MEGA_STREAM_SIZE, t.getNbLines());
         for (int i = 0; i < t.getNbLines(); i += length) {
             long offset = t.getOffsetReader().getOffset(i);
             //assertEquals(i,offset);
@@ -279,35 +298,35 @@
     }
 
     protected void getNbLines(int size) throws IOException, InterruptedException {
-        TestUtil.MEGA_STREAM_SIZE = 6 * size;
-        TestUtil.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + 6 * size + ".log";
-        File file = new File(TestUtil.filename);
+        LoggerHelper.MEGA_STREAM_SIZE = 6 * size;
+        LoggerHelper.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + 6 * size + ".log";
+        File file = new File(LoggerHelper.filename);
         long t0 = System.currentTimeMillis();
         LineReader t = createReader(file, "offsets");
         t.open();
         long nbLines = t.getNbLines();
-        assertEquals(TestUtil.MEGA_STREAM_SIZE, nbLines);
+        Assert.assertEquals(LoggerHelper.MEGA_STREAM_SIZE, nbLines);
         t.close();
         long t1 = System.currentTimeMillis();
-        log.info("(" + nbLines + ") [" + TestUtil.MEGA_STREAM_SIZE + "] in " + time(t0, t1) + " [file: " + file + ", length: " + StringUtil.convertMemory(file.length()) + "]");
+        log.info("(" + nbLines + ") [" + LoggerHelper.MEGA_STREAM_SIZE + "] in " + time(t0, t1) + " [file: " + file + ", length: " + StringUtil.convertMemory(file.length()) + "]");
     }
 
     protected void createOffset(int size) throws IOException, InterruptedException {
-        TestUtil.MEGA_STREAM_SIZE = 6 * size;
-        TestUtil.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + 6 * size + ".log";
-        File file = new File(TestUtil.filename);
-        File offsetfile = new File(TestUtil.filename + ".offsets");
+        LoggerHelper.MEGA_STREAM_SIZE = 6 * size;
+        LoggerHelper.filename = "bench/" + LineReaderTest.class.getSimpleName() + "_" + 6 * size + ".log";
+        File file = new File(LoggerHelper.filename);
+        File offsetfile = new File(LoggerHelper.filename + ".offsets");
         if (offsetfile.exists()) {
             if (!offsetfile.delete()) {
-                fail("could not delete file " + offsetfile);
+                Assert.fail("could not delete file " + offsetfile);
             }
         }
         long t0 = System.currentTimeMillis();
         LineReader t = createReader(file, "offsets");
-        assertEquals(TestUtil.MEGA_STREAM_SIZE, t.getNbLines());
+        Assert.assertEquals(LoggerHelper.MEGA_STREAM_SIZE, t.getNbLines());
         t.close();
         long t1 = System.currentTimeMillis();
-        log.info("time (" + time(t0, t1) + ") [" + TestUtil.MEGA_STREAM_SIZE + "] [file: " + file + ", length: " + StringUtil.convertMemory(file.length()) + "] [offsetfile: " + offsetfile + ", length: " + StringUtil.convertMemory(offsetfile.length()) + "]");
+        log.info("time (" + time(t0, t1) + ") [" + LoggerHelper.MEGA_STREAM_SIZE + "] [file: " + file + ", length: " + StringUtil.convertMemory(file.length()) + "] [offsetfile: " + offsetfile + ", length: " + StringUtil.convertMemory(offsetfile.length()) + "]");
     }
 
     public static String time(long t0, long t1) {
@@ -328,10 +347,11 @@
             sb.append(secondes).append("s ");
         }
         sb.append(total).append("ms ");
-        sb.append(" ~ ").append((float) (t1 - t0) / TestUtil.MEGA_STREAM_SIZE);
+        sb.append(" ~ ").append((float) (t1 - t0) / LoggerHelper.MEGA_STREAM_SIZE);
         return sb.toString();
     }
 
+    @Test
     public void testSimple() throws Exception {
 
         String filename = "bench/LineReaderTest_30.log";

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/io/LineReaderUtilTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/io/LineReaderUtilTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/logging/io/LineReaderUtilTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -1,14 +1,35 @@
+/* *##%
+ * Copyright (C) 2009 Code Lutin
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 2
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.
+ *##%*/
+
 package fr.ifremer.isisfish.logging.io;
 
-import fr.ifremer.TestUtils;
-import fr.ifremer.isisfish.logging.LogLevel;
-import fr.ifremer.isisfish.logging.LogLevelUtil;
-import fr.ifremer.isisfish.logging.TestUtil;
-import junit.framework.TestCase;
+import java.io.File;
+
 import org.apache.commons.logging.Log;
 import org.apache.commons.logging.LogFactory;
+import org.junit.Assert;
+import org.junit.Before;
+import org.junit.Test;
 
-import java.io.File;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
+import fr.ifremer.isisfish.logging.LogLevel;
+import fr.ifremer.isisfish.logging.LogLevelUtil;
+import fr.ifremer.isisfish.logging.LoggerHelper;
 
 /**
  * Tests unitaires sur les implantations de LineReader
@@ -16,15 +37,15 @@
  * @author chemit
  */
 
-public class LineReaderUtilTest extends TestCase {
+public class LineReaderUtilTest extends AbstractIsisFishTest {
 
     protected static final Log log = LogFactory.getLog(LineReaderUtilTest.class);
 
-    static File testDir;
+    protected static File testDir;
 
     public static File getTestDir() {
         if (testDir == null) {
-            testDir = new File(TestUtils.getTargetdir(), "bench_" + System.nanoTime());
+            testDir = new File(getTargetdir(), "bench_" + System.nanoTime());
             if (!testDir.mkdirs()) {
                 throw new IllegalStateException("could not create directory " + testDir);
             }
@@ -49,19 +70,18 @@
     };
     File f;
 
-    protected void setUp() throws Exception {
-        super.setUp();
-
+    @Before
+    public void setUp() throws Exception {
         System.out.println("benchdir " + getTestDir());
         String filename = "LineReaderTest_30.log";
         f = new File(testDir, filename);
 
         if (!f.exists()) {
-            TestUtil.createMock(testDir, filename, 5);
+            LoggerHelper.createMock(testDir, filename, 5);
         }
     }
 
-
+    @Test
     public void testLevelReader() throws Exception {
 
         long nbLines;
@@ -71,7 +91,7 @@
         reader.getOffsetReader().deleteOffsetFile();
         reader.open();
         nbLines = reader.getNbLines();
-        assertEquals(30, nbLines);
+        Assert.assertEquals(30, nbLines);
         log.info("found " + nbLines + " in reader " + reader);
 
         reader2 = new LineReaderUtil.LevelLineReader(reader, new FileOffsetReader(new File(reader.getFile().getParentFile(), "leveloffsets_" + LogLevel.DEBUG.mask())), LogLevel.FATAL);
@@ -79,7 +99,7 @@
         reader2.open();
         nbLines = reader2.getNbLines();
         log.info("found " + nbLines + " in reader " + reader2);
-        assertEquals(5, nbLines);
+        Assert.assertEquals(5, nbLines);
         reader2.close();
 
         reader2 = new LineReaderUtil.LevelLineReader(reader, new FileOffsetReader(new File(reader.getFile().getParentFile(), "leveloffsets_" + LogLevel.DEBUG.mask())), LogLevel.DEBUG);
@@ -87,7 +107,7 @@
         reader2.open();
         nbLines = reader2.getNbLines();
         log.info("found " + nbLines + " in reader " + reader2);
-        assertEquals(5, nbLines);
+        Assert.assertEquals(5, nbLines);
         reader2.close();
 
         reader2 = new LineReaderUtil.LevelLineReader(reader, new FileOffsetReader(new File(reader.getFile().getParentFile(), "leveloffsets_" + LogLevel.INFO.mask())), LogLevel.INFO);
@@ -95,7 +115,7 @@
         reader2.open();
         nbLines = reader2.getNbLines();
         log.info("found " + nbLines + " in reader " + reader2);
-        assertEquals(5, nbLines);
+        Assert.assertEquals(5, nbLines);
         reader2.getOffsetReader().deleteOffsetFile();
         reader2.close();
 
@@ -103,6 +123,7 @@
         reader.close();
     }
 
+    @Test
     public void testLevelsReader() throws Exception {
 
         LineReader reader, reader2, reader3;
@@ -113,7 +134,7 @@
         reader.getOffsetReader().deleteOffsetFile();
         reader.open();
         nbLines = reader.getNbLines();
-        assertEquals(30, nbLines);
+        Assert.assertEquals(30, nbLines);
         log.info("found " + nbLines + " in reader " + reader);
 
         levels = LogLevelUtil.createSet(LogLevel.DEBUG, LogLevel.INFO);
@@ -122,57 +143,57 @@
         reader2.open();
         nbLines = reader2.getNbLines();
         log.info("found " + nbLines + " in reader " + reader2);
-        assertEquals(10, nbLines);
+        Assert.assertEquals(10, nbLines);
         reader2.getOffsetReader().deleteOffsetFile();
         reader2.close();
 
         levels = LogLevelUtil.createSet(LogLevel.WARN, LogLevel.INFO);
         reader2 = new LineReaderUtil.LevelsLineReader(reader, new FileOffsetReader(new File(reader.getFile().getParentFile(), "leveloffsets_" + levels)), LogLevel.INFO, LogLevel.WARN);
         reader2.getOffsetReader().deleteOffsetFile();
-        assertTrue(reader2.getOffsetReader().needCreate());
+        Assert.assertTrue(reader2.getOffsetReader().needCreate());
         reader2.open();
         nbLines = reader2.getNbLines();
         log.info("found " + nbLines + " in reader " + reader2);
-        assertEquals(10, nbLines);
+        Assert.assertEquals(10, nbLines);
 
         levels = LogLevelUtil.createSet(LogLevel.INFO);
         reader3 = new LineReaderUtil.LevelsLineReader(reader2, new FileOffsetReader(new File(reader.getFile().getParentFile(), "leveloffsets_" + levels)), LogLevel.INFO);
         reader3.getOffsetReader().deleteOffsetFile();
-        assertTrue(reader3.getOffsetReader().needCreate());
+        Assert.assertTrue(reader3.getOffsetReader().needCreate());
         reader3.open();
         nbLines = reader3.getNbLines();
         log.info("found " + nbLines + " in reader " + reader3);
-        assertEquals(5, nbLines);
+        Assert.assertEquals(5, nbLines);
 
         reader2.close();
         reader3.close();
 
         levels = LogLevelUtil.createSet(LogLevel.INFO, LogLevel.WARN);
         reader2 = new LineReaderUtil.LevelsLineReader(reader, new FileOffsetReader(new File(reader.getFile().getParentFile(), "leveloffsets_" + levels)), LogLevel.WARN, LogLevel.INFO);
-        assertFalse(reader2.getOffsetReader().needCreate());
+        Assert.assertFalse(reader2.getOffsetReader().needCreate());
         reader2.open();
         nbLines = reader2.getNbLines();
         log.info("found " + nbLines + " in reader " + reader2);
-        assertEquals(10, nbLines);
+        Assert.assertEquals(10, nbLines);
         reader2.getOffsetReader().deleteOffsetFile();
         reader2.close();
 
         levels = LogLevelUtil.createSet(LogLevel.DEBUG);
         reader2 = new LineReaderUtil.LevelsLineReader(reader, new FileOffsetReader(new File(reader.getFile().getParentFile(), "leveloffsets_" + levels)), LogLevel.DEBUG);
-        assertFalse(reader2.getOffsetReader().needCreate());
+        Assert.assertFalse(reader2.getOffsetReader().needCreate());
         reader2.open();
         nbLines = reader2.getNbLines();
         log.info("found " + nbLines + " in reader " + reader2);
-        assertEquals(5, nbLines);
+        Assert.assertEquals(5, nbLines);
         reader2.close();
 
         levels = LogLevelUtil.createSet(LogLevel.DEBUG, LogLevel.DEBUG);
         reader2 = new LineReaderUtil.LevelsLineReader(reader, new FileOffsetReader(new File(reader.getFile().getParentFile(), "leveloffsets_" + levels)), LogLevel.DEBUG, LogLevel.DEBUG);
-        assertFalse(reader2.getOffsetReader().needCreate());
+        Assert.assertFalse(reader2.getOffsetReader().needCreate());
         reader2.open();
         nbLines = reader2.getNbLines();
         log.info("found " + nbLines + " in reader " + reader2);
-        assertEquals(5, nbLines);
+        Assert.assertEquals(5, nbLines);
         reader2.getOffsetReader().deleteOffsetFile();
         reader2.close();
 
@@ -181,6 +202,7 @@
         reader.close();
     }
 
+    @Test
     public void testPatternReader() throws Exception {
 
         LineReader reader, reader2;
@@ -190,7 +212,7 @@
         reader.getOffsetReader().deleteOffsetFile();
         reader.open();
         nbLines = reader.getNbLines();
-        assertEquals(30, nbLines);
+        Assert.assertEquals(30, nbLines);
         log.info("found " + nbLines + " in reader " + reader);
 
         reader2 = new LineReaderUtil.PatternLineReader(reader, new MemoryOffsetReader(100), "DEBUG.*", 0);
@@ -198,7 +220,7 @@
         reader2.open();
         nbLines = reader2.getNbLines();
         log.info("found " + nbLines + " in reader " + reader2);
-        assertEquals(5, nbLines);
+        Assert.assertEquals(5, nbLines);
         reader2.close();
 
         reader2 = new LineReaderUtil.PatternLineReader(reader, new MemoryOffsetReader(100), "ADEBUG.*", 0);
@@ -206,7 +228,7 @@
         reader2.open();
         nbLines = reader2.getNbLines();
         log.info("found " + nbLines + " in reader " + reader2);
-        assertEquals(0, nbLines);
+        Assert.assertEquals(0, nbLines);
         reader2.close();
 
         reader.getOffsetReader().deleteOffsetFile();

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/mexico/MexicoHelperTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/mexico/MexicoHelperTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/mexico/MexicoHelperTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -31,7 +31,7 @@
 import org.codelutin.util.FileUtil;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 import fr.ifremer.isisfish.simulator.sensitivity.DesignPlan;
 import fr.ifremer.isisfish.simulator.sensitivity.Factor;
 import fr.ifremer.isisfish.simulator.sensitivity.domain.ContinuousDomain;
@@ -48,7 +48,7 @@
  * Last update: $Date: 2008-10-07 18:46:13 +0200 (mar 07 oct 2008) $ by :
  * $Author: tchemit $
  */
-public class MexicoHelperTest {
+public class MexicoHelperTest extends AbstractIsisFishTest {
 
     /** Commons logging log. */
     private static Log log = LogFactory.getLog(MexicoHelperTest.class);
@@ -67,9 +67,9 @@
         matrix1.setValue(new int[] { 2, 1 }, -1);
 
         // factor 1
-        Factor<Double,Double> factorContinuous = new Factor<Double,Double>(
+        Factor<Double, Double> factorContinuous = new Factor<Double, Double>(
                 "factor 1 (double continuous)");
-        ContinuousDomain<Double,Double> domain1 = new ContinuousDomain<Double,Double>();
+        ContinuousDomain<Double, Double> domain1 = new ContinuousDomain<Double, Double>();
         domain1.setMinBound(0.0);
         domain1.setMaxBound(50.0);
         factorContinuous.setDomain(domain1);
@@ -77,8 +77,9 @@
                 .setPath("fr.ifremer.isisfish.entities.PopulationGroup#1156461521013#0.1715620681984218#maxLength");
 
         // factor 2
-        Factor<Double,Double> factorDiscrete = new Factor<Double,Double>("factor 2 (double discrete)");
-        DiscreteDomain<Double,Double> domain2 = new DiscreteDomain<Double,Double>();
+        Factor<Double, Double> factorDiscrete = new Factor<Double, Double>(
+                "factor 2 (double discrete)");
+        DiscreteDomain<Double, Double> domain2 = new DiscreteDomain<Double, Double>();
         domain2.getValues().put(0.0, 12.3);
         domain2.getValues().put(1.0, 70.9);
         domain2.getValues().put(2.0, 21.0);
@@ -90,8 +91,9 @@
         factorDiscrete.setValue(3.0);
 
         // factor 3
-        Factor<Integer,Double> factorContinuous2 = new Factor<Integer,Double>("factor 3 (integer discrete)");
-        DiscreteDomain<Integer,Double> domain3 = new DiscreteDomain<Integer,Double>();
+        Factor<Integer, Double> factorContinuous2 = new Factor<Integer, Double>(
+                "factor 3 (integer discrete)");
+        DiscreteDomain<Integer, Double> domain3 = new DiscreteDomain<Integer, Double>();
         domain3.getValues().put(0.0, 13);
         domain3.getValues().put(0.0, 14);
         domain3.getValues().put(0.0, 15);
@@ -100,7 +102,7 @@
                 .setPath("fr.ifremer.isisfish.entities.PopulationGroup#1156461521076#0.6526656643346673#minLength");
 
         // factor 4
-        Factor<MatrixND,Double> factorMatrixContinuous = new Factor<MatrixND,Double>(
+        Factor<MatrixND, Double> factorMatrixContinuous = new Factor<MatrixND, Double>(
                 "factor 4 (MatrixContinuous)");
         MatrixContinuousDomain domain4 = new MatrixContinuousDomain();
         domain4.setCoefficient(0.1);
@@ -111,7 +113,7 @@
                 .setPath("fr.ifremer.isisfish.entities.PopulationGroup#1156461521076#0.6526656643346673#minLength");
 
         // factor 5
-        Factor<Double,Double> factorEquationContinuous = new Factor<Double,Double>(
+        Factor<Double, Double> factorEquationContinuous = new Factor<Double, Double>(
                 "factor 5 (EquationContinuous)");
         EquationContinuousDomain domain5 = new EquationContinuousDomain();
         domain5.setCoefficient(0.1);
@@ -144,13 +146,14 @@
         // test xml export
         String xml = MexicoHelper.getDesignPlanAsXML(testDesignPlan);
 
-        Assert.assertTrue(xml.indexOf("<factor name=\"factor 2 (double discrete)\"") != -1);
+        Assert.assertTrue(xml
+                .indexOf("<factor name=\"factor 2 (double discrete)\"") != -1);
         //Assert.assertTrue(xml.indexOf("<range min=\"12.0\" max=\"99.0\" />") != -1);
         Assert.assertTrue(xml.indexOf("<value>70.9</value>") != -1);
 
         if (log.isDebugEnabled()) {
             xml = xml.replaceAll(">", ">\n");
-            FileUtil.writeString(new File(TestUtils.getTargetdir(),
+            FileUtil.writeString(new File(getTargetdir(),
                     "mexicohelper_designplan.xml"), xml);
             log.info("testGetDesignPlanAsXML xml = " + xml);
         }
@@ -163,8 +166,9 @@
      */
     @Test
     public void testGetDesignPlanFromXML() throws IOException {
-        
-        File testFile = new File("src/test/resources/mexico/mexicohelper_designplan.xml");
+
+        File testFile = new File(
+                "src/test/resources/mexico/mexicohelper_designplan.xml");
         // topia context can be null in tests
         DesignPlan plan = MexicoHelper.getDesignPlanFromXML(testFile, null);
 
@@ -174,7 +178,7 @@
         xml = xml.replaceAll(">", ">\n");
         log.info("testGetDesignPlanFromXML xml = " + xml);
     }
-    
+
     /**
      * Test que l'export XML de l'import XML produise le meme xml.
      * 
@@ -187,14 +191,15 @@
         DesignPlan testDesignPlan = getTestDesignPlan();
         String xml1 = MexicoHelper.getDesignPlanAsXML(testDesignPlan);
         log.debug("xml 1 = " + xml1);
-        
+
         // export
-        File testFile = new File("src/test/resources/mexico/mexicohelper_designplan.xml");
+        File testFile = new File(
+                "src/test/resources/mexico/mexicohelper_designplan.xml");
         // topia context can be null in tests
         DesignPlan plan = MexicoHelper.getDesignPlanFromXML(testFile, null);
         String xml2 = MexicoHelper.getDesignPlanAsXML(plan);
         log.debug("xml 2 = " + xml2);
-        
+
         Assert.assertEquals(xml1, xml2);
     }
 }

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/SimulationHelperTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/SimulationHelperTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/SimulationHelperTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -27,12 +27,10 @@
 import org.codelutin.math.matrix.DoubleBigVector;
 import org.codelutin.math.matrix.MatrixFactory;
 import org.codelutin.topia.TopiaContext;
-import org.junit.AfterClass;
 import org.junit.Assert;
-import org.junit.BeforeClass;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 import fr.ifremer.isisfish.datastore.ResultStorage;
 import fr.ifremer.isisfish.datastore.SimulationStorage;
 import fr.ifremer.isisfish.entities.Result;
@@ -50,7 +48,7 @@
  * Last update: $Date$
  * by : $Author$
  */
-public class SimulationHelperTest {
+public class SimulationHelperTest extends AbstractIsisFishTest {
 
     /** Commons logging log. */
     private static Log log = LogFactory.getLog(SimulationHelperTest.class);
@@ -59,16 +57,6 @@
             "src" + File.separator + "test" + File.separator + "resources" + File.separator + "simulations" + File.separator + "test-nonregression-20090203.zip",
             // put here other zip simulation test
     };
-    
-    @BeforeClass
-    public static void init() throws Exception {
-        TestUtils.init();
-    }
-    
-    @AfterClass
-    public static void clean() {
-        TestUtils.clean();
-    }
 
 //    public void testVerifResult() throws Exception {
 //        try {
@@ -140,7 +128,7 @@
 
             for (String zipName : SIMULATION_ZIP_FILE) {
                 // recuperation du fichier zip de la simulation de test
-                File zip = new File(TestUtils.getBasedir(), zipName);
+                File zip = new File(getBasedir(), zipName);
 
                 // import de cette simulation
                 String name = "simulation-test-" + System.currentTimeMillis();

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/SimulationParameterTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/SimulationParameterTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/SimulationParameterTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -22,14 +22,12 @@
 
 import junit.framework.Assert;
 
-import org.junit.BeforeClass;
-import org.junit.Ignore;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 
 /**
- * TODO COMMENT ME.
+ * Simulation parameter test class.
  *
  * @author chatellier
  * @version $Revision: 1.0 $
@@ -37,14 +35,8 @@
  * Last update : $Date: 19 mars 2009 $
  * By : $Author: chatellier $
  */
- at Ignore
-public class SimulationParameterTest {
+public class SimulationParameterTest extends AbstractIsisFishTest {
 
-    @BeforeClass
-    public static void init() throws Exception {
-        TestUtils.init();
-    }
-    
     /**
      * Test to build one simulation parameters.
      * 
@@ -53,19 +45,18 @@
      */
     @Test
     public void testToPropertiesFromPropertties() {
-        
+
         SimulationParameter params = new SimulationParameter();
         params.setIsisFishVersion("3.2.0.4");
         params.setDescription("desc");
-        
+
         // make transform
         Properties props = params.toProperties();
         SimulationParameter params2 = new SimulationParameter();
         params2.fromProperties(null, props);
-        
+
         Assert.assertEquals("3.2.0.4", params2.getIsisFishVersion());
         Assert.assertEquals("desc", params2.getDescription());
     }
-    
-    
+
 }

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/SimulationPreScriptTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/SimulationPreScriptTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/SimulationPreScriptTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -36,10 +36,9 @@
 import org.codelutin.topia.TopiaException;
 import org.junit.After;
 import org.junit.Before;
-import org.junit.BeforeClass;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 import fr.ifremer.isisfish.IsisFishDAOHelper;
 import fr.ifremer.isisfish.datastore.SimulationStorage;
 import fr.ifremer.isisfish.datastore.StorageException;
@@ -70,31 +69,27 @@
  * Last update : $Date: 24 févr. 2009 $
  * By : $Author: chatellier $
  */
-public class SimulationPreScriptTest {
+public class SimulationPreScriptTest extends AbstractIsisFishTest {
     
-    /** Commons logging log. */
+    /** log. */
     private static Log log = LogFactory.getLog(SimulationPreScriptTest.class);
     
-    //protected TopiaContext rootContext;
-    
     protected static Configuration freemarkerConfiguration;
-    
-    @BeforeClass
-    public static void init() throws Exception {
-        freemarkerConfiguration = TestUtils.getFreemarkerConfiguration();
-    }
-    
+
     @Before
     public void setUp() throws Exception {
         // not do it in @BeforeClass
         // test will fail !
-        TestUtils.init();
-        System.setProperty("hibernate.hbm2ddl.auto", "create");
+        init();
+        freemarkerConfiguration = getFreemarkerConfiguration();
+        // very important , other test wil fail with that
+        //System.setProperty("hibernate.hbm2ddl.auto", "create");
     }
     
     @After
     public void tearDown() {
-        System.setProperty("hibernate.hbm2ddl.auto", "");
+        // very important , other test wil fail with that
+        //System.clearProperty("hibernate.hbm2ddl.auto");
     }
     
     /**
@@ -165,6 +160,7 @@
         context.setSimulationStorage(simulation);
         // FIXME here is the error, getDb throw exception
         //simulationPreScript.beforeSimulation(context);
+        SimulationContext.remove();
         
         // try to find previous entity
         vesselType = vesselTypeDAO.findByTopiaId(topiaId);
@@ -270,6 +266,7 @@
         context.setSimulationStorage(simulation);
         // FIXME here is the error, getDb throw exception
         //simulationPreScript.beforeSimulation(context);
+        SimulationContext.remove();
         
         // try to find previous entity
         populationSeasonInfo = populationSeasonInfoDAO.findByTopiaId(topiaId);

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/launcher/SimulationServiceTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/launcher/SimulationServiceTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/launcher/SimulationServiceTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -28,7 +28,7 @@
 import org.junit.Before;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 import fr.ifremer.isisfish.entities.Population;
 import fr.ifremer.isisfish.entities.PopulationGroup;
 import fr.ifremer.isisfish.entities.PopulationImpl;
@@ -51,7 +51,7 @@
  * 
  * Last update : $Date: 24 févr. 2009 $ By : $Author: chatellier $
  */
-public class SimulationServiceTest {
+public class SimulationServiceTest extends AbstractIsisFishTest {
 
     /** Commons logging log. */
     private static Log log = LogFactory.getLog(SimulationServiceTest.class);
@@ -60,7 +60,7 @@
     public void setUp() throws Exception {
         // not do it in @BeforeClass
         // test will fail !
-        TestUtils.init();
+        AbstractIsisFishTest.init();
     }
 
     /**

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/launcher/SshSimulatorLauncherTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/launcher/SshSimulatorLauncherTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/launcher/SshSimulatorLauncherTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -22,10 +22,9 @@
 
 import junit.framework.Assert;
 
-import org.junit.BeforeClass;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 import fr.ifremer.isisfish.IsisFish;
 import freemarker.template.TemplateException;
 
@@ -39,13 +38,8 @@
  * Last update : $Date: 22 janv. 2009 $
  * By : $Author: chatellier $
  */
-public class SshSimulatorLauncherTest {
+public class SshSimulatorLauncherTest extends AbstractIsisFishTest {
 
-    @BeforeClass
-    public static void init() throws Exception {
-        TestUtils.init();
-    }
-
     /**
      * Test l'instantiation du script qsub (caparmor).
      * 

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/sensitivity/FactorTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/sensitivity/FactorTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/sensitivity/FactorTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -25,7 +25,6 @@
 import org.junit.Assert;
 import org.junit.Test;
 
-import fr.ifremer.isisfish.entities.Equation;
 import fr.ifremer.isisfish.simulator.sensitivity.domain.ContinuousDomain;
 import fr.ifremer.isisfish.simulator.sensitivity.domain.DiscreteDomain;
 import fr.ifremer.isisfish.simulator.sensitivity.domain.EquationContinuousDomain;

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/sensitivity/SensitivityCalculatorRandomMock.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/sensitivity/SensitivityCalculatorRandomMock.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/simulator/sensitivity/SensitivityCalculatorRandomMock.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -24,7 +24,6 @@
 
 import org.apache.commons.logging.Log;
 import org.apache.commons.logging.LogFactory;
-import org.codelutin.math.matrix.MatrixND;
 
 import fr.ifremer.isisfish.datastore.SimulationStorage;
 import fr.ifremer.isisfish.simulator.launcher.SimulationServiceTest;

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/ui/sensitivity/FactorTreeModelTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/ui/sensitivity/FactorTreeModelTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/ui/sensitivity/FactorTreeModelTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -21,7 +21,6 @@
 import static org.codelutin.i18n.I18n._;
 
 import java.awt.HeadlessException;
-import java.io.Serializable;
 import java.util.ArrayList;
 import java.util.List;
 
@@ -38,6 +37,7 @@
 import org.codelutin.math.matrix.MatrixND;
 import org.junit.Test;
 
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 import fr.ifremer.isisfish.simulator.sensitivity.Factor;
 import fr.ifremer.isisfish.simulator.sensitivity.domain.ContinuousDomain;
 import fr.ifremer.isisfish.simulator.sensitivity.domain.DiscreteDomain;
@@ -53,8 +53,8 @@
  * Last update: $Date: 2009-02-03 17:44:23 +0100 (mar 03 fév 2009) $
  * by : $Author: chatellier $
  */
-public class FactorTreeModelTest{
-    
+public class FactorTreeModelTest extends AbstractIsisFishTest {
+
     /** Logger for this class */
     private static final Log log = LogFactory.getLog(FactorTreeModelTest.class);
 
@@ -65,8 +65,9 @@
      */
     protected List<Factor> getFactors() {
 
-        Factor<Integer,Integer> factor1 = new Factor<Integer,Integer>("testint");
-        ContinuousDomain<Integer,Integer> domain1 = new ContinuousDomain<Integer,Integer>();
+        Factor<Integer, Integer> factor1 = new Factor<Integer, Integer>(
+                "testint");
+        ContinuousDomain<Integer, Integer> domain1 = new ContinuousDomain<Integer, Integer>();
         domain1.setMinBound(0);
         domain1.setMaxBound(50);
         factor1.setDomain(domain1);
@@ -94,14 +95,16 @@
         matrix2.setValue(new int[] { 1, 2 }, -13000);
 
         // factor
-        Factor<MatrixND,String> factor2 = new Factor<MatrixND,String>("testmatrix");
-        DiscreteDomain<MatrixND,String> domain2 = new DiscreteDomain<MatrixND,String>();
+        Factor<MatrixND, String> factor2 = new Factor<MatrixND, String>(
+                "testmatrix");
+        DiscreteDomain<MatrixND, String> domain2 = new DiscreteDomain<MatrixND, String>();
         domain2.getValues().put("m1", matrix1);
         domain2.getValues().put("m2", matrix2);
         factor2.setDomain(domain2);
-        factor2.setPath("org.codelutin.math.matrix.MatrixND#563456293453#2.456347646#dim");
+        factor2
+                .setPath("org.codelutin.math.matrix.MatrixND#563456293453#2.456347646#dim");
         factor2.setValueForIdentifier("m2");
-        
+
         List<Factor> factors1 = new ArrayList<Factor>();
         factors1.add(factor1);
         factors1.add(factor2);
@@ -114,7 +117,7 @@
      */
     @Test
     public void testJTreeModel() throws InterruptedException {
-        
+
         TreeNode root = new DefaultMutableTreeNode(getFactors());
         final JTree tree = new JTree(root);
         tree.setRootVisible(true);
@@ -127,10 +130,12 @@
             SwingUtilities.invokeLater(new Runnable() {
                 @Override
                 public void run() {
-                    JOptionPane.showMessageDialog(dialog, tree,_("Tree factor model"), JOptionPane.INFORMATION_MESSAGE);
+                    JOptionPane.showMessageDialog(dialog, tree,
+                            _("Tree factor model"),
+                            JOptionPane.INFORMATION_MESSAGE);
                 }
             });
-        
+
             Thread t = new Thread(new Runnable() {
                 public void run() {
                     try {
@@ -142,12 +147,12 @@
                 }
             });
             t.start();
-    
+
             // it would really be nice to wait the thread, otherwise the test
             // means nothing!!!
             t.join();
         } catch (HeadlessException he) {
-            if(log.isErrorEnabled()) {
+            if (log.isErrorEnabled()) {
                 log.error("No X11 display available", he);
             }
         }

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/ui/widget/filter/FilterDialogModelMock.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/ui/widget/filter/FilterDialogModelMock.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/ui/widget/filter/FilterDialogModelMock.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -13,6 +13,8 @@
  * A simple mock of filter to test Filter operations.
  * <p/>
  * To be used in unit tests
+ * 
+ * @deprecated on 20090514 never used
  */
 public class FilterDialogModelMock extends FilterModel<FilterDialogModelMock.ModelMock, FilterDialogModelMock.ModelMock> {
 

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/util/CompileHelperTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/util/CompileHelperTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/util/CompileHelperTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -29,10 +29,9 @@
 import org.apache.commons.logging.LogFactory;
 import org.codelutin.util.FileUtil;
 import org.junit.Assert;
-import org.junit.BeforeClass;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 
 /**
  * CompileHelperTest.
@@ -46,21 +45,12 @@
  * Last update: $Date$
  * by : $Author$
  */
-public class CompileHelperTest {
+public class CompileHelperTest extends AbstractIsisFishTest {
 
     /** Class logger */
     private static Log log = LogFactory.getLog(CompileHelperTest.class);
 
     /**
-     * Called once before all class tests.
-     * @throws Exception 
-     */
-    @BeforeClass
-    public static void init() throws Exception {
-        TestUtils.init();
-    }
-    
-    /**
      * Return a Java code content in Java 6.
      * 
      * @param name Class name
@@ -77,7 +67,7 @@
         content.append("}");
         return content.toString();
     }
-    
+
     /**
      * Return a Java code content in Java 6 that extends a class.
      * 
@@ -87,7 +77,8 @@
      */
     protected String getSecondClassContent(String name, String extendsName) {
         StringBuffer content = new StringBuffer();
-        content.append("public class " + name + " extends " + extendsName + " {");
+        content.append("public class " + name + " extends " + extendsName
+                + " {");
         content.append("    @Override");
         content.append("    public boolean isEmpty(String s) {");
         content.append("        return false;");
@@ -95,7 +86,7 @@
         content.append("}");
         return content.toString();
     }
-    
+
     /**
      * Test une compilation de classe et une
      * instantiation de la classe compilée.
@@ -105,7 +96,7 @@
      */
     @Test
     public void testCompile() throws IOException, ClassNotFoundException {
-        File f = File.createTempFile("testCompile", ".java", TestUtils.getTargetdir());
+        File f = File.createTempFile("testCompile", ".java", getTargetdir());
         String filename = FileUtil.basename(f, ".java");
         String code = getFirstClassContent(filename);
         FileUtil.writeString(f, code);
@@ -122,7 +113,7 @@
         Class<?> c = cl.loadClass(filename);
         log.info("class name: " + c.getName());
         Assert.assertEquals(filename, c.getName());
-        
+
         // delete
         File fclass = new File(f.getAbsolutePath().replaceAll("java$", "class"));
         fclass.delete();
@@ -138,12 +129,12 @@
     @Test
     public void testCompileDepend() throws IOException, ClassNotFoundException {
 
-        File fA = File.createTempFile("testCompileA", ".java", TestUtils.getTargetdir());
+        File fA = File.createTempFile("testCompileA", ".java", getTargetdir());
         String filenameA = FileUtil.basename(fA, ".java");
         String codeA = getFirstClassContent(filenameA);
         FileUtil.writeString(fA, codeA);
 
-        File fB = File.createTempFile("testCompileB", ".java", TestUtils.getTargetdir());
+        File fB = File.createTempFile("testCompileB", ".java", getTargetdir());
         String filenameB = FileUtil.basename(fB, ".java");
         String codeB = getSecondClassContent(filenameB, filenameA);
         FileUtil.writeString(fB, codeB);
@@ -152,8 +143,8 @@
 
         List<File> classpath = new ArrayList<File>();
         classpath.add(fB.getParentFile());
-        CompileHelper.compile(classpath, Collections.singletonList(fB),
-                dest, null);
+        CompileHelper.compile(classpath, Collections.singletonList(fB), dest,
+                null);
 
         // essai de chargement de la classe
         URL[] cp = new URL[] { dest.toURI().toURL() };
@@ -169,11 +160,13 @@
         c = cl.loadClass(filenameA);
         log.info("class name: " + c.getName());
         Assert.assertEquals(filenameA, c.getName());
-        
+
         // delete
-        File fclassA = new File(fA.getAbsolutePath().replaceAll("java$", "class"));
+        File fclassA = new File(fA.getAbsolutePath().replaceAll("java$",
+                "class"));
         fclassA.delete();
-        File fclassB = new File(fB.getAbsolutePath().replaceAll("java$", "class"));
+        File fclassB = new File(fB.getAbsolutePath().replaceAll("java$",
+                "class"));
         fclassB.delete();
         fA.delete();
         fB.delete();

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/util/EvaluateHelperTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/util/EvaluateHelperTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/util/EvaluateHelperTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -23,10 +23,9 @@
 
 import junit.framework.Assert;
 
-import org.junit.BeforeClass;
 import org.junit.Test;
 
-import fr.ifremer.TestUtils;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 import fr.ifremer.isisfish.equation.EmigrationEquation;
 import fr.ifremer.isisfish.equation.PopulationGrowth;
 import fr.ifremer.isisfish.equation.PopulationGrowthReverse;
@@ -40,13 +39,8 @@
  * Last update : $Date$
  * By : $Author$
  */
-public class EvaluateHelperTest {
+public class EvaluateHelperTest extends AbstractIsisFishTest {
 
-    @BeforeClass
-    public static void init() throws Exception {
-        TestUtils.init();
-    }
-
     /**
      * Test #normalizeClassName().
      */
@@ -87,28 +81,30 @@
         Assert.assertNotNull(result);
         Assert.assertEquals("4.0", result.toString());
     }
-    
+
     /**
      * Test #evaluate() but twice to check that previous
      * class don't stay in class loader.
      */
     @Test
     public void testDoubleContentEvaluate() {
-        
+
         Map<String, Object> args = new HashMap<String, Object>();
         args.put("context", null);
         args.put("length", 2.0);
         args.put("group", null);
-        
+
         String equationContent = "return length * 2.0;";
         Object result = EvaluatorHelper.evaluate("org.codelutin.equation",
-                "TestDoubleContentEvaluate", PopulationGrowthReverse.class, equationContent, args);
+                "TestDoubleContentEvaluate", PopulationGrowthReverse.class,
+                equationContent, args);
         Assert.assertNotNull(result);
         Assert.assertEquals("4.0", result.toString());
-        
+
         equationContent = "return length * 3.0;";
         result = EvaluatorHelper.evaluate("org.codelutin.equation",
-                "TestDoubleContentEvaluate", PopulationGrowthReverse.class, equationContent, args);
+                "TestDoubleContentEvaluate", PopulationGrowthReverse.class,
+                equationContent, args);
         Assert.assertNotNull(result);
         Assert.assertEquals("6.0", result.toString());
     }

Modified: isis-fish/trunk/src/test/java/fr/ifremer/isisfish/vcs/VCSSVNTest.java
===================================================================
--- isis-fish/trunk/src/test/java/fr/ifremer/isisfish/vcs/VCSSVNTest.java	2009-05-13 17:13:02 UTC (rev 2229)
+++ isis-fish/trunk/src/test/java/fr/ifremer/isisfish/vcs/VCSSVNTest.java	2009-05-14 18:09:22 UTC (rev 2230)
@@ -32,7 +32,6 @@
 import org.junit.After;
 import org.junit.Assert;
 import org.junit.Before;
-import org.junit.BeforeClass;
 import org.junit.Ignore;
 import org.junit.Test;
 import org.tmatesoft.svn.core.SVNCommitInfo;
@@ -47,8 +46,7 @@
 import org.tmatesoft.svn.core.wc.SVNUpdateClient;
 import org.tmatesoft.svn.core.wc.SVNWCClient;
 
-import fr.ifremer.TestUtils;
-import fr.ifremer.isisfish.IsisFish;
+import fr.ifremer.isisfish.AbstractIsisFishTest;
 
 /**
  * Class de test VCS.
@@ -61,12 +59,12 @@
  * 
  * Last update: $Date: 2008-10-07 18:46:13 +0200 (mar 07 oct 2008) $ by : $Author: tchemit $
  */
-public class VCSSVNTest {
+public class VCSSVNTest extends AbstractIsisFishTest {
 
     /** Class logger */
     private static Log log = LogFactory.getLog(VCSSVNTest.class);
 
-    public static final File TMPDIR = TestUtils.getTargetdir();
+    public static final File TMPDIR = getTargetdir();
 
     public static final String FILECONTENTTAG = "Version 3.1.0";
     public static final String FILECONTENTTRUNK = "Version 3.2.0";
@@ -86,49 +84,19 @@
     }
 
     /**
-     * Static test init.
-     * @throws Exception 
-     */
-    @BeforeClass
-    public static void init() throws Exception {
-        TestUtils.init();
-
-        template = new File(TMPDIR, "testsvn-template");
-        remoteRepo = new File(TMPDIR, "testsvn-repo");
-        localRepo = new File(TMPDIR, "testsvn-local");
-        localRepoTrunk = new File(TMPDIR, "testsvn-localTrunk");
-    }
-
-    /**
-     * Clean repo directories.
-     */
-    @Ignore
-    protected void clean() {
-        // un peu de nettoyage
-        if (template.exists()) {
-            FileUtil.deleteRecursively(template);
-        }
-        if (remoteRepo.exists()) {
-            FileUtil.deleteRecursively(remoteRepo);
-        }
-        if (localRepo.exists()) {
-            FileUtil.deleteRecursively(localRepo);
-        }
-        if (localRepoTrunk.exists()) {
-            FileUtil.deleteRecursively(localRepoTrunk);
-        }
-    }
-
-    /**
      * Init call before each test.
      * @throws IOException 
      * @throws SVNException 
      */
     @Before
     public void setUp() throws IOException, SVNException {
+        template = new File(TMPDIR, "testsvn-template");
+        remoteRepo = new File(TMPDIR, "testsvn-repo");
+        localRepo = new File(TMPDIR, "testsvn-local");
+        localRepoTrunk = new File(TMPDIR, "testsvn-localTrunk");
 
         // un peu de nettoyage
-        clean();
+        tearDown();
 
         // creation de l'instance de notre VCS pour les tests
         // on le fait au debut pour que la l'init de la lib svn soit fait
@@ -182,12 +150,23 @@
     }
 
     /**
-     * After each test.
+     * Clean repo directories.
      */
     @After
     public void tearDown() {
         // un peu de nettoyage
-        //clean();
+        if (template.exists()) {
+            FileUtil.deleteRecursively(template);
+        }
+        if (remoteRepo.exists()) {
+            FileUtil.deleteRecursively(remoteRepo);
+        }
+        if (localRepo.exists()) {
+            FileUtil.deleteRecursively(localRepo);
+        }
+        if (localRepoTrunk.exists()) {
+            FileUtil.deleteRecursively(localRepoTrunk);
+        }
     }
 
     /**
@@ -434,7 +413,7 @@
 
         vcs.checkProtocol();
     }
-    
+
     /**
      * Test cleanup.
      * 
@@ -1065,9 +1044,10 @@
         Map<File, SVNStatus> files = vcs.getRemoteStatus(null, true);
         log.info("Will update file = " + files.keySet());
         Assert.assertTrue("Must be one file updated", files.size() == 1);
-        
+
         // try to update...
         List<File> filesInConflict = vcs.update(null, true);
-        Assert.assertTrue("No file should be in conflit", filesInConflict.isEmpty());
+        Assert.assertTrue("No file should be in conflit", filesInConflict
+                .isEmpty());
     }
 }
\ No newline at end of file

    

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