April 2014 - Tutti-commits - mailman.cloud.codelutin.com

r1729 - tags
by maven-release＠users.forge.codelutin.com 24 Apr '14

24 Apr '14

Author: maven-release Date: 2014-04-24 13:01:40 +0200 (Thu, 24 Apr 2014) New Revision: 1729 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/1729 Log: [maven-release-plugin] copy for tag tutti-3.4 Added: tags/tutti-3.4/

1 0

r1728 - in branches/tutti-3.4: . tutti-ichtyometer tutti-persistence tutti-service tutti-ui-swing
by maven-release＠users.forge.codelutin.com 24 Apr '14

24 Apr '14

Author: maven-release Date: 2014-04-24 13:01:34 +0200 (Thu, 24 Apr 2014) New Revision: 1728 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/1728 Log: [maven-release-plugin] prepare release tutti-3.4 Modified: branches/tutti-3.4/pom.xml branches/tutti-3.4/tutti-ichtyometer/pom.xml branches/tutti-3.4/tutti-persistence/pom.xml branches/tutti-3.4/tutti-service/pom.xml branches/tutti-3.4/tutti-ui-swing/pom.xml Modified: branches/tutti-3.4/pom.xml =================================================================== --- branches/tutti-3.4/pom.xml 2014-04-24 10:58:19 UTC (rev 1727) +++ branches/tutti-3.4/pom.xml 2014-04-24 11:01:34 UTC (rev 1728) @@ -32,7 +32,7 @@ <groupId>fr.ifremer</groupId> <artifactId>tutti</artifactId> - <version>3.4-SNAPSHOT</version> + <version>3.4</version> <packaging>pom</packaging> <name>Tutti</name> @@ -99,13 +99,13 @@ <scm> <url> - https://forge.codelutin.com/projects/tutti/repository/branches/tutti-3.4 + https://forge.codelutin.com/projects/tutti/repository/tags/tutti-3.4 </url> <connection> - scm:svn:http://svn.codelutin.com/tutti/branches/tutti-3.4 + scm:svn:http://svn.codelutin.com/tutti/tags/tutti-3.4 </connection> <developerConnection> - scm:svn:https://svn.codelutin.com/tutti/branches/tutti-3.4 + scm:svn:https://svn.codelutin.com/tutti/tags/tutti-3.4 </developerConnection> </scm> <distributionManagement> Modified: branches/tutti-3.4/tutti-ichtyometer/pom.xml =================================================================== --- branches/tutti-3.4/tutti-ichtyometer/pom.xml 2014-04-24 10:58:19 UTC (rev 1727) +++ branches/tutti-3.4/tutti-ichtyometer/pom.xml 2014-04-24 11:01:34 UTC (rev 1728) @@ -27,7 +27,7 @@ <parent> <groupId>fr.ifremer</groupId> <artifactId>tutti</artifactId> - <version>3.4-SNAPSHOT</version> + <version>3.4</version> </parent> <groupId>fr.ifremer.tutti</groupId> Modified: branches/tutti-3.4/tutti-persistence/pom.xml =================================================================== --- branches/tutti-3.4/tutti-persistence/pom.xml 2014-04-24 10:58:19 UTC (rev 1727) +++ branches/tutti-3.4/tutti-persistence/pom.xml 2014-04-24 11:01:34 UTC (rev 1728) @@ -27,7 +27,7 @@ <parent> <groupId>fr.ifremer</groupId> <artifactId>tutti</artifactId> - <version>3.4-SNAPSHOT</version> + <version>3.4</version> </parent> <groupId>fr.ifremer.tutti</groupId> Modified: branches/tutti-3.4/tutti-service/pom.xml =================================================================== --- branches/tutti-3.4/tutti-service/pom.xml 2014-04-24 10:58:19 UTC (rev 1727) +++ branches/tutti-3.4/tutti-service/pom.xml 2014-04-24 11:01:34 UTC (rev 1728) @@ -27,7 +27,7 @@ <parent> <groupId>fr.ifremer</groupId> <artifactId>tutti</artifactId> - <version>3.4-SNAPSHOT</version> + <version>3.4</version> </parent> <groupId>fr.ifremer.tutti</groupId> Modified: branches/tutti-3.4/tutti-ui-swing/pom.xml =================================================================== --- branches/tutti-3.4/tutti-ui-swing/pom.xml 2014-04-24 10:58:19 UTC (rev 1727) +++ branches/tutti-3.4/tutti-ui-swing/pom.xml 2014-04-24 11:01:34 UTC (rev 1728) @@ -27,7 +27,7 @@ <parent> <groupId>fr.ifremer</groupId> <artifactId>tutti</artifactId> - <version>3.4-SNAPSHOT</version> + <version>3.4</version> </parent> <groupId>fr.ifremer.tutti</groupId>

1 0

r1727 - in branches/tutti-3.4: . tutti-ichtyometer tutti-persistence tutti-service tutti-ui-swing
by maven-release＠users.forge.codelutin.com 24 Apr '14

24 Apr '14

Author: maven-release Date: 2014-04-24 12:58:19 +0200 (Thu, 24 Apr 2014) New Revision: 1727 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/1727 Log: prepare release 3.4 Modified: branches/tutti-3.4/pom.xml branches/tutti-3.4/tutti-ichtyometer/pom.xml branches/tutti-3.4/tutti-persistence/pom.xml branches/tutti-3.4/tutti-service/pom.xml branches/tutti-3.4/tutti-ui-swing/pom.xml Modified: branches/tutti-3.4/pom.xml =================================================================== --- branches/tutti-3.4/pom.xml 2014-04-24 10:56:38 UTC (rev 1726) +++ branches/tutti-3.4/pom.xml 2014-04-24 10:58:19 UTC (rev 1727) @@ -32,7 +32,7 @@ <groupId>fr.ifremer</groupId> <artifactId>tutti</artifactId> - <version>3.3.5</version> + <version>3.4-SNAPSHOT</version> <packaging>pom</packaging> <name>Tutti</name> @@ -99,13 +99,13 @@ <scm> <url> - https://forge.codelutin.com/projects/tutti/repository/tags/tutti-3.3.5 + https://forge.codelutin.com/projects/tutti/repository/branches/tutti-3.4 </url> <connection> - scm:svn:http://svn.codelutin.com/tutti/tags/tutti-3.3.5 + scm:svn:http://svn.codelutin.com/tutti/branches/tutti-3.4 </connection> <developerConnection> - scm:svn:https://svn.codelutin.com/tutti/tags/tutti-3.3.5 + scm:svn:https://svn.codelutin.com/tutti/branches/tutti-3.4 </developerConnection> </scm> <distributionManagement> Modified: branches/tutti-3.4/tutti-ichtyometer/pom.xml =================================================================== --- branches/tutti-3.4/tutti-ichtyometer/pom.xml 2014-04-24 10:56:38 UTC (rev 1726) +++ branches/tutti-3.4/tutti-ichtyometer/pom.xml 2014-04-24 10:58:19 UTC (rev 1727) @@ -27,7 +27,7 @@ <parent> <groupId>fr.ifremer</groupId> <artifactId>tutti</artifactId> - <version>3.3.5</version> + <version>3.4-SNAPSHOT</version> </parent> <groupId>fr.ifremer.tutti</groupId> Modified: branches/tutti-3.4/tutti-persistence/pom.xml =================================================================== --- branches/tutti-3.4/tutti-persistence/pom.xml 2014-04-24 10:56:38 UTC (rev 1726) +++ branches/tutti-3.4/tutti-persistence/pom.xml 2014-04-24 10:58:19 UTC (rev 1727) @@ -27,7 +27,7 @@ <parent> <groupId>fr.ifremer</groupId> <artifactId>tutti</artifactId> - <version>3.3.5</version> + <version>3.4-SNAPSHOT</version> </parent> <groupId>fr.ifremer.tutti</groupId> Modified: branches/tutti-3.4/tutti-service/pom.xml =================================================================== --- branches/tutti-3.4/tutti-service/pom.xml 2014-04-24 10:56:38 UTC (rev 1726) +++ branches/tutti-3.4/tutti-service/pom.xml 2014-04-24 10:58:19 UTC (rev 1727) @@ -27,7 +27,7 @@ <parent> <groupId>fr.ifremer</groupId> <artifactId>tutti</artifactId> - <version>3.3.5</version> + <version>3.4-SNAPSHOT</version> </parent> <groupId>fr.ifremer.tutti</groupId> Modified: branches/tutti-3.4/tutti-ui-swing/pom.xml =================================================================== --- branches/tutti-3.4/tutti-ui-swing/pom.xml 2014-04-24 10:56:38 UTC (rev 1726) +++ branches/tutti-3.4/tutti-ui-swing/pom.xml 2014-04-24 10:58:19 UTC (rev 1727) @@ -27,7 +27,7 @@ <parent> <groupId>fr.ifremer</groupId> <artifactId>tutti</artifactId> - <version>3.3.5</version> + <version>3.4-SNAPSHOT</version> </parent> <groupId>fr.ifremer.tutti</groupId>

1 0

r1726 - branches
by maven-release＠users.forge.codelutin.com 24 Apr '14

24 Apr '14

Author: maven-release Date: 2014-04-24 12:56:38 +0200 (Thu, 24 Apr 2014) New Revision: 1726 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/1726 Log: for tutti-3.4 release Added: branches/tutti-3.4/

1 0

24 Apr '14

Author: tchemit Date: 2014-04-24 12:17:09 +0200 (Thu, 24 Apr 2014) New Revision: 1725 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/1725 Log: fixes #4979 Added: trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/ trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/ trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/ trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/ trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/ trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/MatrixId2.java trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/ObjectTypeCode2.java trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/PmfmId2.java trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/QualitativeValueId2.java Removed: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/data/AttachementObjectTypeEnum.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFile.java trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFileTest.java Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceNoDbImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocols.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AbstractPersistenceService.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AccidentalBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AttachmentPersistenceService.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AttachmentPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceService.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/IndividualObservationBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MarineLitterBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ProgramPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ProtocolPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TechnicalPersistenceService.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TechnicalPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TuttiPersistenceServiceLocator.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchPersistenceHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchTreeHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/MeasurementPersistenceHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/SamplePersistenceHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/VesselPersonFeaturesPersistenceHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/test/DatabaseFixtures.java trunk/tutti-persistence/src/main/resources/applicationContext-service-tutti.xml trunk/tutti-persistence/src/main/resources/i18n/tutti-persistence_en_GB.properties trunk/tutti-persistence/src/main/resources/i18n/tutti-persistence_fr_FR.properties trunk/tutti-persistence/src/main/resources/tutti-db-enumerations.properties trunk/tutti-persistence/src/main/xmi/tutti-persistence.zargo trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocolsTest.java trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/AttachmentPersistenceServiceWriteTest.java trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceReadTest.java trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceWriteTest.java trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceReadTest.java trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceWriteTest.java trunk/tutti-service/pom.xml trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/PersistenceService.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostExportService.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostImportService.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ProtocolImportExportService.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/psionimport/PsionImportService.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriCatch.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriImportExportService.java trunk/tutti-ui-swing/pom.xml trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/action/ImportPupitriAction.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/category/EditSampleCategoryModelUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/category/EditSampleCategoryModelUIModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/ValidateCruiseUI.jaxx trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/ValidateCruiseUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/ValidateCruiseUIModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/accidental/AccidentalBatchRowModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchRowModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/create/CreateBenthosBatchUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/individualobservation/IndividualObservationBatchRowModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/marinelitter/MarineLitterBatchRowModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchRowModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/create/CreateSpeciesBatchUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/attachment/AttachmentModelAware.java Added: trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/MatrixId2.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/MatrixId2.java (rev 0) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/MatrixId2.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -0,0 +1,196 @@ +/* + * #%L + * SIH-Adagio + * $Id$ + * $HeadURL: https://forge.ifremer.fr/svn/sih-adagio/trunk/adagio/mda/src/main/config/ja… $ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU Affero General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU Affero General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + * #L% + */ + +package fr.ifremer.adagio.core.dao.referential.pmfm; + +import fr.ifremer.adagio.core.dao.technical.AdagioEnumerationDef; + +import java.io.Serializable; +import java.util.ArrayList; +import java.util.Collections; +import java.util.LinkedHashMap; +import java.util.List; +import java.util.Map; + +import static org.nuiton.i18n.I18n.n; + +/** + * + */ +public enum MatrixId2 + implements Serializable, AdagioEnumerationDef<Integer> { + /** TODO: Model Documentation for Enumeration Literal PRODUCT_BATCH value 1 */ + PRODUCT_BATCH( + "adagio.enumeration.MatrixId.PRODUCT_BATCH", + n("adagio.enumeration.MatrixId.PRODUCT_BATCH.description"), + 1); + + /** + * The serial version UID of this class. Needed for serialization. + */ + private static final long serialVersionUID = 1L; + + private String key; + + private String description; + + private Integer enumValue; + + private MatrixId2(String key, String description, Integer value) { + this.key = key; + this.description = description; + this.enumValue = value; + } + + @Override + public void setValue(Integer newValue) { + if (newValue != null && !this.enumValue.equals(newValue)) { + // Update static lists + values.remove(this.enumValue); + literals.remove(this.enumValue); + this.enumValue = newValue; + values.put(this.enumValue, this); + literals.add(this.enumValue); + } + } + + @Override + public String getValueAsString() { + return String.valueOf(this.enumValue); + } + + /** + * Retrieves an instance of MatrixId from <code>its name</code>. + * + * @param name + * the name to create the MatrixId from. + * @return The enumeration literal named after the 'name' argument + */ + public static MatrixId2 fromString(String name) { + return MatrixId2.valueOf(name); + } + + /** + * Returns an enumeration literal Integer <code>value</code>. + * Required by JAXB2 enumeration implementation + * + * @return Integer with corresponding value + */ + public Integer value() { + return this.enumValue; + } + + /** + * Returns an instance of MatrixId from Integer <code>value</code>. + * Required by JAXB2 enumeration implementation + * + * @param value + * the value to create the MatrixId from. + * @return static Enumeration with corresponding value + */ + public static MatrixId2 fromValue(Integer value) { + for (MatrixId2 enumName : MatrixId2.values()) { + if (enumName.getValue().equals(value)) { + return enumName; + } + } + throw new IllegalArgumentException("MatrixId.fromValue(" + value.toString() + ')'); + } + + /** + * Gets the underlying value of this type safe enumeration. + * This method is necessary to comply with DaoBase implementation. + * + * @return The name of this literal. + */ + public Integer getValue() { + return this.enumValue; + } + + @Override + public String getDescription() { + return description; + } + + @Override + public String getKey() { + return key; + } + + @Override + public Class<?> getType() { + return Integer.class; + } + + /** + * Returns an unmodifiable list containing the literals that are known by this enumeration. + * + * @return A List containing the actual literals defined by this enumeration, this list + * can not be modified. + */ + public static List<Integer> literals() { + return MatrixId2.literals; + } + + /** + * Returns an unmodifiable list containing the names of the literals that are known + * by this enumeration. + * + * @return A List containing the actual names of the literals defined by this + * enumeration, this list can not be modified. + */ + public static List<String> names() { + return MatrixId2.names; + } + + private static Map<Integer, MatrixId2> values = new LinkedHashMap<Integer, MatrixId2>(4, 1); + + private static List<Integer> literals = new ArrayList<Integer>(4); + + private static List<String> names = new ArrayList<String>(4); + + private static List<MatrixId2> valueList = new ArrayList<MatrixId2>(4); + + /** + * Initializes the values. + */ + static { + synchronized (MatrixId2.values) { + MatrixId2.values.put(PRODUCT_BATCH.enumValue, PRODUCT_BATCH); + } + synchronized (MatrixId2.valueList) { + MatrixId2.valueList.add(PRODUCT_BATCH); + // For Adagio, lists could be reload from configuration + // MatrixId.valueList = Collections.unmodifiableList(valueList); + } + synchronized (MatrixId2.literals) { + MatrixId2.literals.add(PRODUCT_BATCH.enumValue); + // For Adagio, lists could be reload from configuration + // MatrixId.literals = Collections.unmodifiableList(literals); + } + synchronized (MatrixId2.names) { + MatrixId2.names.add("PRODUCT_BATCH"); + MatrixId2.names = Collections.unmodifiableList(names); + } + } +} \ No newline at end of file Property changes on: trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/MatrixId2.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision Added: svn:eol-style + native Added: trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/ObjectTypeCode2.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/ObjectTypeCode2.java (rev 0) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/ObjectTypeCode2.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -0,0 +1,252 @@ +package fr.ifremer.adagio.core.dao.referential.pmfm; + +import fr.ifremer.adagio.core.dao.technical.AdagioEnumerationDef; + +import java.io.Serializable; +import java.util.ArrayList; +import java.util.Collections; +import java.util.LinkedHashMap; +import java.util.List; +import java.util.Map; + +import static org.nuiton.i18n.I18n.n; + +/** + * Created on 4/24/14. + * + * @author Tony Chemit <chemit(a)codelutin.com> + * @since 3.5 + */ +public enum ObjectTypeCode2 implements Serializable, AdagioEnumerationDef<String> { + /** TODO: Model Documentation for Enumeration Literal ACTIVITY_CALENDAR value "ACTIVITY_CALENDAR" */ + ACTIVITY_CALENDAR( + "adagio.enumeration.ObjectTypeCode.ACTIVITY_CALENDAR", + n("adagio.enumeration.ObjectTypeCode.ACTIVITY_CALENDAR.description"), + "ACTIVITY_CALENDAR"), + /** TODO: Model Documentation for Enumeration Literal FISHING_TRIP value "FISHING_TRIP" */ + FISHING_TRIP( + "adagio.enumeration.ObjectTypeCode.FISHING_TRIP", + n("adagio.enumeration.ObjectTypeCode.FISHING_TRIP.description"), + "FISHING_TRIP"), + /** TODO: Model Documentation for Enumeration Literal OPERATION value "OPERATION" */ + OPERATION( + "adagio.enumeration.ObjectTypeCode.OPERATION", + n("adagio.enumeration.ObjectTypeCode.OPERATION.description"), + "OPERATION"), + /** TODO: Model Documentation for Enumeration Literal BATCH value "BATCH" */ + CATCH_BATCH( + "adagio.enumeration.ObjectTypeCode.CATCH_BATCH", + n("adagio.enumeration.ObjectTypeCode.CATCH_BATCH.description"), + "CATCH_BATCH"), + /** TODO: Model Documentation for Enumeration Literal BATCH value "BATCH" */ + BATCH( + "adagio.enumeration.ObjectTypeCode.BATCH", + n("adagio.enumeration.ObjectTypeCode.BATCH.description"), + "BATCH"), + /** TODO: Model Documentation for Enumeration Literal SAMPLE value "SAMPLE" */ + SAMPLE( + "adagio.enumeration.ObjectTypeCode.SAMPLE", + n("adagio.enumeration.ObjectTypeCode.SAMPLE.description"), + "SAMPLE"), + /** TODO: Model Documentation for Enumeration Literal SCIENTIFIC_CRUISE value "SCIENTIFIC_CRUISE" */ + SCIENTIFIC_CRUISE( + "adagio.enumeration.ObjectTypeCode.SCIENTIFIC_CRUISE", + n("adagio.enumeration.ObjectTypeCode.SCIENTIFIC_CRUISE.description"), + "SCIENTIFIC_CRUISE"), + /** TODO: Model Documentation for Enumeration Literal SALE value "SALE" */ + SALE( + "adagio.enumeration.ObjectTypeCode.SALE", + n("adagio.enumeration.ObjectTypeCode.SALE.description"), + "SALE"), + /** TODO: Model Documentation for Enumeration Literal LANDING value "LANDING" */ + LANDING( + "adagio.enumeration.ObjectTypeCode.LANDING", + n("adagio.enumeration.ObjectTypeCode.LANDING.description"), + "LANDING"), + /** TODO: Model Documentation for Enumeration Literal DAILY_ACTIVITY_CALENDAR value "DAILY_ACTIVITY_CALENDAR" */ + DAILY_ACTIVITY_CALENDAR( + "adagio.enumeration.ObjectTypeCode.DAILY_ACTIVITY_CALENDAR", + n("adagio.enumeration.ObjectTypeCode.DAILY_ACTIVITY_CALENDAR.description"), + "DAILY_ACTIVITY_CALENDAR"); + + /** + * The serial version UID of this class. Needed for serialization. + */ + private static final long serialVersionUID = -8263283045204115976L; + + private String key; + + private String description; + + private String enumValue; + + private ObjectTypeCode2(String key, String description, String value) { + this.key = key; + this.description = description; + this.enumValue = value; + } + + @Override + public void setValue(String newValue) { + if (newValue != null && !this.enumValue.equals(newValue)) { + // Update static lists + values.remove(this.enumValue); + literals.remove(this.enumValue); + this.enumValue = newValue; + values.put(this.enumValue, this); + literals.add(this.enumValue); + } + } + + + @Override + public String getValueAsString() { + return String.valueOf(this.enumValue); + } + + /** + * Retrieves an instance of ObjectTypeCode2 from <code>its name</code>. + * + * @param name the name to create the ObjectTypeCode2 from. + * @return The enumeration literal named after the 'name' argument + */ + public static ObjectTypeCode2 fromString(String name) { + return ObjectTypeCode2.valueOf(name); + } + + /** + * Returns an enumeration literal String <code>value</code>. + * Required by JAXB2 enumeration implementation + * + * @return String with corresponding value + */ + public String value() { + return this.enumValue; + } + + /** + * Returns an instance of ObjectTypeCode2 from String <code>value</code>. + * Required by JAXB2 enumeration implementation + * + * @param value the value to create the ObjectTypeCode2 from. + * @return static Enumeration with corresponding value + */ + public static ObjectTypeCode2 fromValue(String value) { + for (ObjectTypeCode2 enumName : ObjectTypeCode2.values()) { + if (enumName.getValue().equals(value)) { + return enumName; + } + } + throw new IllegalArgumentException("ObjectTypeCode2.fromValue(" + value + ')'); + } + + /** + * Gets the underlying value of this type safe enumeration. + * This method is necessary to comply with DaoBase implementation. + * + * @return The name of this literal. + */ + public String getValue() { + return this.enumValue; + } + + @Override + public String getDescription() { + return description; + } + + @Override + public String getKey() { + return key; + } + + @Override + public Class<?> getType() { + return String.class; + } + + /** + * Returns an unmodifiable list containing the literals that are known by this enumeration. + * + * @return A List containing the actual literals defined by this enumeration, this list + * can not be modified. + */ + public static List<String> literals() { + return ObjectTypeCode2.literals; + } + + /** + * Returns an unmodifiable list containing the names of the literals that are known + * by this enumeration. + * + * @return A List containing the actual names of the literals defined by this + * enumeration, this list can not be modified. + */ + public static List<String> names() { + return ObjectTypeCode2.names; + } + + private static Map<String, ObjectTypeCode2> values = new LinkedHashMap<String, ObjectTypeCode2>(9, 1); + + private static List<String> literals = new ArrayList<String>(9); + + private static List<String> names = new ArrayList<String>(9); + + private static List<ObjectTypeCode2> valueList = new ArrayList<ObjectTypeCode2>(9); + + /** + * Initializes the values. + */ + static { + synchronized (ObjectTypeCode2.values) { + ObjectTypeCode2.values.put(ACTIVITY_CALENDAR.enumValue, ACTIVITY_CALENDAR); + ObjectTypeCode2.values.put(FISHING_TRIP.enumValue, FISHING_TRIP); + ObjectTypeCode2.values.put(OPERATION.enumValue, OPERATION); + ObjectTypeCode2.values.put(BATCH.enumValue, BATCH); + ObjectTypeCode2.values.put(SAMPLE.enumValue, SAMPLE); + ObjectTypeCode2.values.put(SCIENTIFIC_CRUISE.enumValue, SCIENTIFIC_CRUISE); + ObjectTypeCode2.values.put(SALE.enumValue, SALE); + ObjectTypeCode2.values.put(LANDING.enumValue, LANDING); + ObjectTypeCode2.values.put(DAILY_ACTIVITY_CALENDAR.enumValue, DAILY_ACTIVITY_CALENDAR); + } + synchronized (ObjectTypeCode2.valueList) { + ObjectTypeCode2.valueList.add(ACTIVITY_CALENDAR); + ObjectTypeCode2.valueList.add(FISHING_TRIP); + ObjectTypeCode2.valueList.add(OPERATION); + ObjectTypeCode2.valueList.add(BATCH); + ObjectTypeCode2.valueList.add(SAMPLE); + ObjectTypeCode2.valueList.add(SCIENTIFIC_CRUISE); + ObjectTypeCode2.valueList.add(SALE); + ObjectTypeCode2.valueList.add(LANDING); + ObjectTypeCode2.valueList.add(DAILY_ACTIVITY_CALENDAR); + // For Adagio, lists could be reload from configuration + //ObjectTypeCode2.valueList = Collections.unmodifiableList(valueList); + } + synchronized (ObjectTypeCode2.literals) { + ObjectTypeCode2.literals.add(ACTIVITY_CALENDAR.enumValue); + ObjectTypeCode2.literals.add(FISHING_TRIP.enumValue); + ObjectTypeCode2.literals.add(OPERATION.enumValue); + ObjectTypeCode2.literals.add(BATCH.enumValue); + ObjectTypeCode2.literals.add(SAMPLE.enumValue); + ObjectTypeCode2.literals.add(SCIENTIFIC_CRUISE.enumValue); + ObjectTypeCode2.literals.add(SALE.enumValue); + ObjectTypeCode2.literals.add(LANDING.enumValue); + ObjectTypeCode2.literals.add(DAILY_ACTIVITY_CALENDAR.enumValue); + // For Adagio, lists could be reload from configuration + //ObjectTypeCode2.literals = Collections.unmodifiableList(literals); + } + synchronized (ObjectTypeCode2.names) { + ObjectTypeCode2.names.add("ACTIVITY_CALENDAR"); + ObjectTypeCode2.names.add("FISHING_TRIP"); + ObjectTypeCode2.names.add("OPERATION"); + ObjectTypeCode2.names.add("BATCH"); + ObjectTypeCode2.names.add("SAMPLE"); + ObjectTypeCode2.names.add("SCIENTIFIC_CRUISE"); + ObjectTypeCode2.names.add("SALE"); + ObjectTypeCode2.names.add("LANDING"); + ObjectTypeCode2.names.add("DAILY_ACTIVITY_CALENDAR"); + ObjectTypeCode2.names = Collections.unmodifiableList(names); + } + } + // type-safe-enumeration-object java merge-point +} \ No newline at end of file Property changes on: trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/ObjectTypeCode2.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision Added: svn:eol-style + native Added: trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/PmfmId2.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/PmfmId2.java (rev 0) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/PmfmId2.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -0,0 +1,504 @@ +/* + * #%L + * SIH-Adagio + * $Id$ + * $HeadURL: https://forge.ifremer.fr/svn/sih-adagio/trunk/adagio/mda/src/main/config/ja… $ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU Affero General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU Affero General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + * #L% + */ + +package fr.ifremer.adagio.core.dao.referential.pmfm; + +import fr.ifremer.adagio.core.dao.technical.AdagioEnumerationDef; + +import java.io.Serializable; +import java.util.ArrayList; +import java.util.Collections; +import java.util.LinkedHashMap; +import java.util.List; +import java.util.Map; + +import static org.nuiton.i18n.I18n.n; + +/** + * + */ +public enum PmfmId2 + implements Serializable, AdagioEnumerationDef<Integer> +{ + // /** TODO: Model Documentation for Enumeration Literal ALIVE_WEIGHT_CALCULATED value "POIDS_CALCULE;6;1;6" */ + // ALIVE_WEIGHT_CALCULATED ( + // "adagio.enumeration.PmfmId.ALIVE_WEIGHT_CALCULATED", + // n("adagio.enumeration.PmfmId.ALIVE_WEIGHT_CALCULATED.description"), + // "POIDS_CALCULE;6;1;6"), + // /** TODO: Model Documentation for Enumeration Literal WEIGHT_SIZE_CALCULATED value "POIDS_CALCULE;6;1;7" */ + // WEIGHT_SIZE_CALCULATED ( + // "adagio.enumeration.PmfmId.WEIGHT_SIZE_CALCULATED", + // n("adagio.enumeration.PmfmId.WEIGHT_SIZE_CALCULATED.description"), + // "POIDS_CALCULE;6;1;7"), + // /** TODO: Model Documentation for Enumeration Literal WEIGHT_TOTAL_CALCULATED value "POIDS_CALCULE;6;1;17" */ + // WEIGHT_TOTAL_CALCULATED ( + // "adagio.enumeration.PmfmId.WEIGHT_TOTAL_CALCULATED", + // n("adagio.enumeration.PmfmId.WEIGHT_TOTAL_CALCULATED.description"), + // "POIDS_CALCULE;6;1;17"), + // /** TODO: Model Documentation for Enumeration Literal WEIGHT_SIZE_EXTRAPOLATE value "POIDS_CALCULE;6;1;21" */ + // WEIGHT_SIZE_EXTRAPOLATE ( + // "adagio.enumeration.PmfmId.WEIGHT_SIZE_EXTRAPOLATE", + // n("adagio.enumeration.PmfmId.WEIGHT_SIZE_EXTRAPOLATE.description"), + // "POIDS_CALCULE;6;1;21"), + // /** TODO: Model Documentation for Enumeration Literal CALCULATED_WEIGHT_CHILDREN_SUM value "POIDS_CALCULE;6;1;24" + // */ + // CALCULATED_WEIGHT_CHILDREN_SUM ( + // "adagio.enumeration.PmfmId.CALCULATED_WEIGHT_CHILDREN_SUM", + // n("adagio.enumeration.PmfmId.CALCULATED_WEIGHT_CHILDREN_SUM.description"), + // "POIDS_CALCULE;6;1;24"), + // /** TODO: Model Documentation for Enumeration Literal CALCULATED_ALIVE_WEIGHT_CHILDREN_SUM value "POIDS_CALCULE;6;1;25" */ + // CALCULATED_ALIVE_WEIGHT_CHILDREN_SUM ( + // "adagio.enumeration.PmfmId.CALCULATED_ALIVE_WEIGHT_CHILDREN_SUM", + // n("adagio.enumeration.PmfmId.CALCULATED_ALIVE_WEIGHT_CHILDREN_SUM.description"), + // "POIDS_CALCULE;6;1;25"), + // /** TODO: Model Documentation for Enumeration Literal MAX_DISTANCE_FOR_OPERATION_WITH_GEAR value "DISTANCE_MAX_OPERATION;17;1;1" */ + // MAX_DISTANCE_FOR_OPERATION_WITH_GEAR ( + // "adagio.enumeration.PmfmId.MAX_DISTANCE_FOR_OPERATION_WITH_GEAR", + // n("adagio.enumeration.PmfmId.MAX_DISTANCE_FOR_OPERATION_WITH_GEAR.description"), + // "DISTANCE_MAX_OPERATION;17;1;1"), + // /** TODO: Model Documentation for Enumeration Literal MAX_DURATION_FOR_OPERATION_WITH_GEAR value "DUREE_MAX_OPERATION;17;1;1" */ + // MAX_DURATION_FOR_OPERATION_WITH_GEAR ( + // "adagio.enumeration.PmfmId.MAX_DURATION_FOR_OPERATION_WITH_GEAR", + // n("adagio.enumeration.PmfmId.MAX_DURATION_FOR_OPERATION_WITH_GEAR.description"), + // "DUREE_MAX_OPERATION;17;1;1"), + // /** TODO: Model Documentation for Enumeration Literal MAX_DURATION_FOR_OPERATION_WITH_METIER value "DUREE_MAX_OPERATION;18;1;1" */ + // MAX_DURATION_FOR_OPERATION_WITH_METIER ( + // "adagio.enumeration.PmfmId.MAX_DURATION_FOR_OPERATION_WITH_METIER", + // n("adagio.enumeration.PmfmId.MAX_DURATION_FOR_OPERATION_WITH_METIER.description"), + // "DUREE_MAX_OPERATION;18;1;1"), + // /** TODO: Model Documentation for Enumeration Literal MAX_DISTANCE_FOR_OPERATION_WITH_METIER value "DISTANCE_MAX_OPERATION;18;1;1" */ + // MAX_DISTANCE_FOR_OPERATION_WITH_METIER ( + // "adagio.enumeration.PmfmId.MAX_DISTANCE_FOR_OPERATION_WITH_METIER", + // n("adagio.enumeration.PmfmId.MAX_DISTANCE_FOR_OPERATION_WITH_METIER.description"), + // "DISTANCE_MAX_OPERATION;18;1;1"), + // /** TODO: Model Documentation for Enumeration Literal STORAGE_STATE value "A_DEFINIR;1;1;1" */ + // STORAGE_STATE ( + // "adagio.enumeration.PmfmId.STORAGE_STATE", + // n("adagio.enumeration.PmfmId.STORAGE_STATE.description"), + // "A_DEFINIR;1;1;1"), + /** TODO: Model Documentation for Enumeration Literal SEX value "196" */ + SEX( + "adagio.enumeration.PmfmId.SEX", + n("adagio.enumeration.PmfmId.SEX.description"), + 196), + /** TODO: Model Documentation for Enumeration Literal SIZE_CATEGORY value "198" */ + SIZE_CATEGORY( + "adagio.enumeration.PmfmId.SIZE_CATEGORY", + n("adagio.enumeration.PmfmId.SIZE_CATEGORY.description"), + 198), + /** TODO: Model Documentation for Enumeration Literal AGE value "1430" */ + AGE( + "adagio.enumeration.PmfmId.AGE", + n("adagio.enumeration.PmfmId.AGE.description"), + 1430), + /** TODO: Model Documentation for Enumeration Literal MATURITY value "174" */ + MATURITY( + "adagio.enumeration.PmfmId.MATURITY", + n("adagio.enumeration.PmfmId.MATURITY.description"), + 174), + /** TODO: Model Documentation for Enumeration Literal MARINE_LITTER_TYPE value "1421" */ + MARINE_LITTER_TYPE( + "adagio.enumeration.PmfmId.MARINE_LITTER_TYPE", + n("adagio.enumeration.PmfmId.MARINE_LITTER_TYPE.description"), + 1421), + /** TODO: Model Documentation for Enumeration Literal MARINE_LITTER_SIZE_CATEGORY value "1422" */ + MARINE_LITTER_SIZE_CATEGORY( + "adagio.enumeration.PmfmId.MARINE_LITTER_SIZE_CATEGORY", + n("adagio.enumeration.PmfmId.MARINE_LITTER_SIZE_CATEGORY.description"), + 1422), + /** TODO: Model Documentation for Enumeration Literal SURVEY_PART value "1432" */ + SURVEY_PART( + "adagio.enumeration.PmfmId.SURVEY_PART", + n("adagio.enumeration.PmfmId.SURVEY_PART.description"), + 1432), + /** TODO: Model Documentation for Enumeration Literal STATION_NUMBER value "1243" */ + STATION_NUMBER( + "adagio.enumeration.PmfmId.STATION_NUMBER", + n("adagio.enumeration.PmfmId.STATION_NUMBER.description"), + 1243), + /** TODO: Model Documentation for Enumeration Literal TRAWL_DISTANCE value "113" */ + TRAWL_DISTANCE( + "adagio.enumeration.PmfmId.TRAWL_DISTANCE", + n("adagio.enumeration.PmfmId.TRAWL_DISTANCE.description"), + 113), + /** TODO: Model Documentation for Enumeration Literal HAUL_VALID value "1163" */ + HAUL_VALID( + "adagio.enumeration.PmfmId.HAUL_VALID", + n("adagio.enumeration.PmfmId.HAUL_VALID.description"), + 1163), + /** TODO: Model Documentation for Enumeration Literal RECTILINEAR_OPERATION value "192" */ + RECTILINEAR_OPERATION( + "adagio.enumeration.PmfmId.RECTILINEAR_OPERATION", + n("adagio.enumeration.PmfmId.RECTILINEAR_OPERATION.description"), + 192), + /** TODO: Model Documentation for Enumeration Literal MULTIRIG_NUMBER value "1420" */ + MULTIRIG_NUMBER( + "adagio.enumeration.PmfmId.MULTIRIG_NUMBER", + n("adagio.enumeration.PmfmId.MULTIRIG_NUMBER.description"), + 1420), + /** TODO: Model Documentation for Enumeration Literal MULTIRIG_AGGREGATION value "1424" */ + MULTIRIG_AGGREGATION( + "adagio.enumeration.PmfmId.MULTIRIG_AGGREGATION", + n("adagio.enumeration.PmfmId.MULTIRIG_AGGREGATION.description"), + 1424), + /** TODO: Model Documentation for Enumeration Literal WEIGHT_MEASURED value "220" */ + WEIGHT_MEASURED( + "adagio.enumeration.PmfmId.WEIGHT_MEASURED", + n("adagio.enumeration.PmfmId.WEIGHT_MEASURED.description"), + 220), + /** TODO: Model Documentation for Enumeration Literal SORTED_UNSORTED value "1428" */ + SORTED_UNSORTED( + "adagio.enumeration.PmfmId.SORTED_UNSORTED", + n("adagio.enumeration.PmfmId.SORTED_UNSORTED.description"), + 1428), + /** TODO: Model Documentation for Enumeration Literal SCIENTIFIC_CRUISE_SORTING_TYPE value "1429" */ + SCIENTIFIC_CRUISE_SORTING_TYPE( + "adagio.enumeration.PmfmId.SCIENTIFIC_CRUISE_SORTING_TYPE", + n("adagio.enumeration.PmfmId.SCIENTIFIC_CRUISE_SORTING_TYPE.description"), + 1429), + /** TODO: Model Documentation for Enumeration Literal SCIENTIFIC_CRUISE_SORTING_TYPE2 value "1431" */ + SCIENTIFIC_CRUISE_SORTING_TYPE2( + "adagio.enumeration.PmfmId.SCIENTIFIC_CRUISE_SORTING_TYPE2", + n("adagio.enumeration.PmfmId.SCIENTIFIC_CRUISE_SORTING_TYPE2.description"), + 1431), + /** TODO: Model Documentation for Enumeration Literal VERTICAL_OPENING value "832" */ + VERTICAL_OPENING( + "adagio.enumeration.PmfmId.VERTICAL_OPENING", + n("adagio.enumeration.PmfmId.VERTICAL_OPENING.description"), + 832), + /** TODO: Model Documentation for Enumeration Literal HORIZONTAL_OPENING_WINGS value "827" */ + HORIZONTAL_OPENING_WINGS( + "adagio.enumeration.PmfmId.HORIZONTAL_OPENING_WINGS", + n("adagio.enumeration.PmfmId.HORIZONTAL_OPENING_WINGS.description"), + 827), + /** TODO: Model Documentation for Enumeration Literal HORIZONTAL_OPENING_DOOR value "830" */ + HORIZONTAL_OPENING_DOOR( + "adagio.enumeration.PmfmId.HORIZONTAL_OPENING_DOOR", + n("adagio.enumeration.PmfmId.HORIZONTAL_OPENING_DOOR.description"), + 830), + /** TODO: Model Documentation for Enumeration Literal DEAD_OR_ALIVE value "1393" */ + DEAD_OR_ALIVE( + "adagio.enumeration.PmfmId.DEAD_OR_ALIVE", + n("adagio.enumeration.PmfmId.DEAD_OR_ALIVE.description"), + 1393), + /** TODO: Model Documentation for Enumeration Literal SORTING_TYPE_TCC value "1747" */ + SORTING_TYPE_TCC( + "adagio.enumeration.PmfmId.SORTING_TYPE_TCC", + n("adagio.enumeration.PmfmId.SORTING_TYPE_TCC.description"), + 1747), + + // NEW FOR TUTTI # PSFM "Pour référencer un autre id de pmfm" + ID_PSFM( + "adagio.enumeration.PmfmId.ID_PSFM", + n("adagio.enumeration.PmfmId.ID_PSFM.description"), + 1433); + + /** + * The serial version UID of this class. Needed for serialization. + */ + private static final long serialVersionUID = 1L; + + private String key; + private String description; + private Integer enumValue; + + private PmfmId2(String key, String description, Integer value) + { + this.key = key; + this.description = description; + this.enumValue = value; + } + + @Override + public void setValue(Integer newValue) { + if (newValue != null && !this.enumValue.equals(newValue)) { + // Update static lists + values.remove(this.enumValue); + literals.remove(this.enumValue); + this.enumValue = newValue; + values.put(this.enumValue, this); + literals.add(this.enumValue); + } + } + + @Override + public String getValueAsString() + { + return String.valueOf(this.enumValue); + } + + /** + * Retrieves an instance of PmfmId from <code>its name</code>. + * + * @param name + * the name to create the PmfmId from. + * @return The enumeration literal named after the 'name' argument + */ + public static PmfmId2 fromString(String name) + { + return PmfmId2.valueOf(name); + } + + /** + * Returns an enumeration literal String <code>value</code>. + * Required by JAXB2 enumeration implementation + * + * @return String with corresponding value + */ + public Integer value() + { + return this.enumValue; + } + + /** + * Returns an instance of PmfmId from String <code>value</code>. + * Required by JAXB2 enumeration implementation + * + * @param value + * the value to create the PmfmId from. + * @return static Enumeration with corresponding value + */ + public static PmfmId2 fromValue(String value) + { + for (PmfmId2 enumName : PmfmId2.values()) + { + if (enumName.getValue().equals(value)) + { + return enumName; + } + } + throw new IllegalArgumentException("PmfmId.fromValue(" + value + ')'); + } + + /** + * Gets the underlying value of this type safe enumeration. + * This method is necessary to comply with DaoBase implementation. + * + * @return The name of this literal. + */ + public Integer getValue() + { + return this.enumValue; + } + + @Override + public String getDescription() { + return description; + } + + @Override + public String getKey() { + return key; + } + + @Override + public Class<?> getType() { + return String.class; + } + + /** + * Returns an unmodifiable list containing the literals that are known by this enumeration. + * + * @return A List containing the actual literals defined by this enumeration, this list + * can not be modified. + */ + public static List<Integer> literals() + { + return PmfmId2.literals; + } + + /** + * Returns an unmodifiable list containing the names of the literals that are known + * by this enumeration. + * + * @return A List containing the actual names of the literals defined by this + * enumeration, this list can not be modified. + */ + public static List<String> names() + { + return PmfmId2.names; + } + + private static final Map<Integer, PmfmId2> values = new LinkedHashMap<Integer, PmfmId2>(33, 1); + private static final List<Integer> literals = new ArrayList<Integer>(33); + private static List<String> names = new ArrayList<String>(33); + private static final List<PmfmId2> valueList = new ArrayList<PmfmId2>(33); + + /** + * Initializes the values. + */ + static + { + synchronized (PmfmId2.values) + { + // PmfmId2.values.put(ALIVE_WEIGHT_CALCULATED.enumValue, ALIVE_WEIGHT_CALCULATED); + // PmfmId2.values.put(WEIGHT_SIZE_CALCULATED.enumValue, WEIGHT_SIZE_CALCULATED); + // PmfmId2.values.put(WEIGHT_TOTAL_CALCULATED.enumValue, WEIGHT_TOTAL_CALCULATED); + // PmfmId2.values.put(WEIGHT_SIZE_EXTRAPOLATE.enumValue, WEIGHT_SIZE_EXTRAPOLATE); + // PmfmId2.values.put(CALCULATED_WEIGHT_CHILDREN_SUM.enumValue, CALCULATED_WEIGHT_CHILDREN_SUM); + // PmfmId2.values.put(CALCULATED_ALIVE_WEIGHT_CHILDREN_SUM.enumValue, CALCULATED_ALIVE_WEIGHT_CHILDREN_SUM); + // PmfmId2.values.put(MAX_DISTANCE_FOR_OPERATION_WITH_GEAR.enumValue, MAX_DISTANCE_FOR_OPERATION_WITH_GEAR); + // PmfmId2.values.put(MAX_DURATION_FOR_OPERATION_WITH_GEAR.enumValue, MAX_DURATION_FOR_OPERATION_WITH_GEAR); + // PmfmId2.values.put(MAX_DURATION_FOR_OPERATION_WITH_METIER.enumValue, + // MAX_DURATION_FOR_OPERATION_WITH_METIER); + // PmfmId2.values.put(MAX_DISTANCE_FOR_OPERATION_WITH_METIER.enumValue, + // MAX_DISTANCE_FOR_OPERATION_WITH_METIER); + // PmfmId2.values.put(STORAGE_STATE.enumValue, STORAGE_STATE); + PmfmId2.values.put(SEX.enumValue, SEX); + PmfmId2.values.put(SIZE_CATEGORY.enumValue, SIZE_CATEGORY); + PmfmId2.values.put(AGE.enumValue, AGE); + PmfmId2.values.put(MATURITY.enumValue, MATURITY); + PmfmId2.values.put(MARINE_LITTER_TYPE.enumValue, MARINE_LITTER_TYPE); + PmfmId2.values.put(MARINE_LITTER_SIZE_CATEGORY.enumValue, MARINE_LITTER_SIZE_CATEGORY); + PmfmId2.values.put(SURVEY_PART.enumValue, SURVEY_PART); + PmfmId2.values.put(STATION_NUMBER.enumValue, STATION_NUMBER); + PmfmId2.values.put(TRAWL_DISTANCE.enumValue, TRAWL_DISTANCE); + PmfmId2.values.put(HAUL_VALID.enumValue, HAUL_VALID); + PmfmId2.values.put(RECTILINEAR_OPERATION.enumValue, RECTILINEAR_OPERATION); + PmfmId2.values.put(MULTIRIG_NUMBER.enumValue, MULTIRIG_NUMBER); + PmfmId2.values.put(MULTIRIG_AGGREGATION.enumValue, MULTIRIG_AGGREGATION); + PmfmId2.values.put(WEIGHT_MEASURED.enumValue, WEIGHT_MEASURED); + PmfmId2.values.put(SORTED_UNSORTED.enumValue, SORTED_UNSORTED); + PmfmId2.values.put(SCIENTIFIC_CRUISE_SORTING_TYPE.enumValue, SCIENTIFIC_CRUISE_SORTING_TYPE); + PmfmId2.values.put(SCIENTIFIC_CRUISE_SORTING_TYPE2.enumValue, SCIENTIFIC_CRUISE_SORTING_TYPE2); + PmfmId2.values.put(VERTICAL_OPENING.enumValue, VERTICAL_OPENING); + PmfmId2.values.put(HORIZONTAL_OPENING_WINGS.enumValue, HORIZONTAL_OPENING_WINGS); + PmfmId2.values.put(HORIZONTAL_OPENING_DOOR.enumValue, HORIZONTAL_OPENING_DOOR); + PmfmId2.values.put(DEAD_OR_ALIVE.enumValue, DEAD_OR_ALIVE); + PmfmId2.values.put(SORTING_TYPE_TCC.enumValue, SORTING_TYPE_TCC); + } + synchronized (PmfmId2.valueList) + { + // PmfmId2.valueList.add(ALIVE_WEIGHT_CALCULATED); + // PmfmId2.valueList.add(WEIGHT_SIZE_CALCULATED); + // PmfmId2.valueList.add(WEIGHT_TOTAL_CALCULATED); + // PmfmId2.valueList.add(WEIGHT_SIZE_EXTRAPOLATE); + // PmfmId2.valueList.add(CALCULATED_WEIGHT_CHILDREN_SUM); + // PmfmId2.valueList.add(CALCULATED_ALIVE_WEIGHT_CHILDREN_SUM); + // PmfmId2.valueList.add(MAX_DISTANCE_FOR_OPERATION_WITH_GEAR); + // PmfmId2.valueList.add(MAX_DURATION_FOR_OPERATION_WITH_GEAR); + // PmfmId2.valueList.add(MAX_DURATION_FOR_OPERATION_WITH_METIER); + // PmfmId2.valueList.add(MAX_DISTANCE_FOR_OPERATION_WITH_METIER); + // PmfmId2.valueList.add(STORAGE_STATE); + PmfmId2.valueList.add(SEX); + PmfmId2.valueList.add(SIZE_CATEGORY); + PmfmId2.valueList.add(AGE); + PmfmId2.valueList.add(MATURITY); + PmfmId2.valueList.add(MARINE_LITTER_TYPE); + PmfmId2.valueList.add(MARINE_LITTER_SIZE_CATEGORY); + PmfmId2.valueList.add(SURVEY_PART); + PmfmId2.valueList.add(STATION_NUMBER); + PmfmId2.valueList.add(TRAWL_DISTANCE); + PmfmId2.valueList.add(HAUL_VALID); + PmfmId2.valueList.add(RECTILINEAR_OPERATION); + PmfmId2.valueList.add(MULTIRIG_NUMBER); + PmfmId2.valueList.add(MULTIRIG_AGGREGATION); + PmfmId2.valueList.add(WEIGHT_MEASURED); + PmfmId2.valueList.add(SORTED_UNSORTED); + PmfmId2.valueList.add(SCIENTIFIC_CRUISE_SORTING_TYPE); + PmfmId2.valueList.add(SCIENTIFIC_CRUISE_SORTING_TYPE2); + PmfmId2.valueList.add(VERTICAL_OPENING); + PmfmId2.valueList.add(HORIZONTAL_OPENING_WINGS); + PmfmId2.valueList.add(HORIZONTAL_OPENING_DOOR); + PmfmId2.valueList.add(DEAD_OR_ALIVE); + PmfmId2.valueList.add(SORTING_TYPE_TCC); + // For Adagio, lists could be reload from configuration + // PmfmId.valueList = Collections.unmodifiableList(valueList); + } + synchronized (PmfmId2.literals) + { + // PmfmId2.literals.add(ALIVE_WEIGHT_CALCULATED.enumValue); + // PmfmId2.literals.add(WEIGHT_SIZE_CALCULATED.enumValue); + // PmfmId2.literals.add(WEIGHT_TOTAL_CALCULATED.enumValue); + // PmfmId2.literals.add(WEIGHT_SIZE_EXTRAPOLATE.enumValue); + // PmfmId2.literals.add(CALCULATED_WEIGHT_CHILDREN_SUM.enumValue); + // PmfmId2.literals.add(CALCULATED_ALIVE_WEIGHT_CHILDREN_SUM.enumValue); + // PmfmId2.literals.add(MAX_DISTANCE_FOR_OPERATION_WITH_GEAR.enumValue); + // PmfmId2.literals.add(MAX_DURATION_FOR_OPERATION_WITH_GEAR.enumValue); + // PmfmId2.literals.add(MAX_DURATION_FOR_OPERATION_WITH_METIER.enumValue); + // PmfmId2.literals.add(MAX_DISTANCE_FOR_OPERATION_WITH_METIER.enumValue); + // PmfmId2.literals.add(STORAGE_STATE.enumValue); + PmfmId2.literals.add(SEX.enumValue); + PmfmId2.literals.add(SIZE_CATEGORY.enumValue); + PmfmId2.literals.add(AGE.enumValue); + PmfmId2.literals.add(MATURITY.enumValue); + PmfmId2.literals.add(MARINE_LITTER_TYPE.enumValue); + PmfmId2.literals.add(MARINE_LITTER_SIZE_CATEGORY.enumValue); + PmfmId2.literals.add(SURVEY_PART.enumValue); + PmfmId2.literals.add(STATION_NUMBER.enumValue); + PmfmId2.literals.add(TRAWL_DISTANCE.enumValue); + PmfmId2.literals.add(HAUL_VALID.enumValue); + PmfmId2.literals.add(RECTILINEAR_OPERATION.enumValue); + PmfmId2.literals.add(MULTIRIG_NUMBER.enumValue); + PmfmId2.literals.add(MULTIRIG_AGGREGATION.enumValue); + PmfmId2.literals.add(WEIGHT_MEASURED.enumValue); + PmfmId2.literals.add(SORTED_UNSORTED.enumValue); + PmfmId2.literals.add(SCIENTIFIC_CRUISE_SORTING_TYPE.enumValue); + PmfmId2.literals.add(SCIENTIFIC_CRUISE_SORTING_TYPE2.enumValue); + PmfmId2.literals.add(VERTICAL_OPENING.enumValue); + PmfmId2.literals.add(HORIZONTAL_OPENING_WINGS.enumValue); + PmfmId2.literals.add(HORIZONTAL_OPENING_DOOR.enumValue); + PmfmId2.literals.add(DEAD_OR_ALIVE.enumValue); + PmfmId2.literals.add(SORTING_TYPE_TCC.enumValue); + // For Adagio, lists could be reload from configuration + // PmfmId.literals = Collections.unmodifiableList(literals); + } + synchronized (PmfmId2.names) + { + PmfmId2.names.add("ALIVE_WEIGHT_CALCULATED"); + PmfmId2.names.add("WEIGHT_SIZE_CALCULATED"); + PmfmId2.names.add("WEIGHT_TOTAL_CALCULATED"); + PmfmId2.names.add("WEIGHT_SIZE_EXTRAPOLATE"); + PmfmId2.names.add("CALCULATED_WEIGHT_CHILDREN_SUM"); + PmfmId2.names.add("CALCULATED_ALIVE_WEIGHT_CHILDREN_SUM"); + PmfmId2.names.add("MAX_DISTANCE_FOR_OPERATION_WITH_GEAR"); + PmfmId2.names.add("MAX_DURATION_FOR_OPERATION_WITH_GEAR"); + PmfmId2.names.add("MAX_DURATION_FOR_OPERATION_WITH_METIER"); + PmfmId2.names.add("MAX_DISTANCE_FOR_OPERATION_WITH_METIER"); + PmfmId2.names.add("STORAGE_STATE"); + PmfmId2.names.add("SEX"); + PmfmId2.names.add("SIZE_CATEGORY"); + PmfmId2.names.add("AGE"); + PmfmId2.names.add("MATURITY"); + PmfmId2.names.add("MARINE_LITTER_TYPE"); + PmfmId2.names.add("MARINE_LITTER_SIZE_CATEGORY"); + PmfmId2.names.add("SURVEY_PART"); + PmfmId2.names.add("STATION_NUMBER"); + PmfmId2.names.add("TRAWL_DISTANCE"); + PmfmId2.names.add("HAUL_VALID"); + PmfmId2.names.add("RECTILINEAR_OPERATION"); + PmfmId2.names.add("MULTIRIG_NUMBER"); + PmfmId2.names.add("MULTIRIG_AGGREGATION"); + PmfmId2.names.add("WEIGHT_MEASURED"); + PmfmId2.names.add("SORTED_UNSORTED"); + PmfmId2.names.add("SCIENTIFIC_CRUISE_SORTING_TYPE"); + PmfmId2.names.add("SCIENTIFIC_CRUISE_SORTING_TYPE2"); + PmfmId2.names.add("VERTICAL_OPENING"); + PmfmId2.names.add("HORIZONTAL_OPENING_WINGS"); + PmfmId2.names.add("HORIZONTAL_OPENING_DOOR"); + PmfmId2.names.add("DEAD_OR_ALIVE"); + PmfmId2.names.add("SORTING_TYPE_TCC"); + PmfmId2.names = Collections.unmodifiableList(names); + } + } +} \ No newline at end of file Property changes on: trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/PmfmId2.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision Added: svn:eol-style + native Added: trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/QualitativeValueId2.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/QualitativeValueId2.java (rev 0) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/QualitativeValueId2.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -0,0 +1,247 @@ +/* + * #%L + * SIH-Adagio + * $Id$ + * $HeadURL: https://forge.ifremer.fr/svn/sih-adagio/trunk/adagio/mda/src/main/config/ja… $ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU Affero General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU Affero General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + * #L% + */ +// +// Attention: Generated code! Do not modify by hand! +// Generated by: TypeSafeEnumeration.vsl in andromda-java-cartridge. +// Model Class: Data::fr.ifremer.adagio.core.dao::referential::pmfm::QualitativeValueId +// Metafacade: org.andromda.metafacades.uml.Enumeration +// Stereotype: Enumeration +// +package fr.ifremer.adagio.core.dao.referential.pmfm; + +import fr.ifremer.adagio.core.dao.technical.AdagioEnumerationDef; + +import java.io.Serializable; +import java.util.ArrayList; +import java.util.Collections; +import java.util.LinkedHashMap; +import java.util.List; +import java.util.Map; + +import static org.nuiton.i18n.I18n.n; + +/** + * + */ +public enum QualitativeValueId2 + implements Serializable, AdagioEnumerationDef<Integer> { + /** TODO: Model Documentation for Enumeration Literal SEX_UNDEFINED value 203 */ + SEX_UNDEFINED( + "adagio.enumeration.QualitativeValueId.SEX_UNDEFINED", + n("adagio.enumeration.QualitativeValueId.SEX_UNDEFINED.description"), + 299), + /** TODO: Model Documentation for Enumeration Literal MATURITY_1 value 272 */ + MATURITY_1( + "adagio.enumeration.QualitativeValueId.MATURITY_1", + n("adagio.enumeration.QualitativeValueId.MATURITY_1.description"), + 272), + /** TODO: Model Documentation for Enumeration Literal MATURITY_2 value 273 */ + MATURITY_2( + "adagio.enumeration.QualitativeValueId.MATURITY_2", + n("adagio.enumeration.QualitativeValueId.MATURITY_2.description"), + 273), + /** TODO: Model Documentation for Enumeration Literal MATURITY_3 value 274 */ + MATURITY_3( + "adagio.enumeration.QualitativeValueId.MATURITY_3", + n("adagio.enumeration.QualitativeValueId.MATURITY_3.description"), + 274), + /** TODO: Model Documentation for Enumeration Literal MATURITY_4 value 275 */ + MATURITY_4( + "adagio.enumeration.QualitativeValueId.MATURITY_4", + n("adagio.enumeration.QualitativeValueId.MATURITY_4.description"), + 275), + /** TODO: Model Documentation for Enumeration Literal MATURITY_5 value 276 */ + MATURITY_5( + "adagio.enumeration.QualitativeValueId.MATURITY_5", + n("adagio.enumeration.QualitativeValueId.MATURITY_5.description"), + 276); + + /** + * The serial version UID of this class. Needed for serialization. + */ + private static final long serialVersionUID = 1L; + + private String key; + + private String description; + + private Integer enumValue; + + private QualitativeValueId2(String key, String description, Integer value) { + this.key = key; + this.description = description; + this.enumValue = value; + } + + @Override + public void setValue(Integer newValue) { + if (newValue != null && !this.enumValue.equals(newValue)) { + // Update static lists + values.remove(this.enumValue); + literals.remove(this.enumValue); + this.enumValue = newValue; + values.put(this.enumValue, this); + literals.add(this.enumValue); + } + } + + @Override + public String getValueAsString() { + return String.valueOf(this.enumValue); + } + + /** + * Retrieves an instance of QualitativeValueId from <code>its name</code>. + * + * @param name + * the name to create the QualitativeValueId from. + * @return The enumeration literal named after the 'name' argument + */ + public static QualitativeValueId2 fromString(String name) { + return QualitativeValueId2.valueOf(name); + } + + /** + * Returns an enumeration literal Integer <code>value</code>. + * Required by JAXB2 enumeration implementation + * + * @return Integer with corresponding value + */ + public Integer value() { + return this.enumValue; + } + + /** + * Returns an instance of QualitativeValueId from Integer <code>value</code>. + * Required by JAXB2 enumeration implementation + * + * @param value + * the value to create the QualitativeValueId from. + * @return static Enumeration with corresponding value + */ + public static QualitativeValueId2 fromValue(Integer value) { + for (QualitativeValueId2 enumName : QualitativeValueId2.values()) { + if (enumName.getValue().equals(value)) { + return enumName; + } + } + throw new IllegalArgumentException("QualitativeValueId.fromValue(" + value.toString() + ')'); + } + + /** + * Gets the underlying value of this type safe enumeration. + * This method is necessary to comply with DaoBase implementation. + * + * @return The name of this literal. + */ + public Integer getValue() { + return this.enumValue; + } + + @Override + public String getDescription() { + return description; + } + + @Override + public String getKey() { + return key; + } + + @Override + public Class<?> getType() { + return Integer.class; + } + + /** + * Returns an unmodifiable list containing the literals that are known by this enumeration. + * + * @return A List containing the actual literals defined by this enumeration, this list + * can not be modified. + */ + public static List<Integer> literals() { + return QualitativeValueId2.literals; + } + + /** + * Returns an unmodifiable list containing the names of the literals that are known + * by this enumeration. + * + * @return A List containing the actual names of the literals defined by this + * enumeration, this list can not be modified. + */ + public static List<String> names() { + return QualitativeValueId2.names; + } + + private static Map<Integer, QualitativeValueId2> values = new LinkedHashMap<Integer, QualitativeValueId2>(38, 1); + + private static List<Integer> literals = new ArrayList<Integer>(38); + + private static List<String> names = new ArrayList<String>(38); + + private static List<QualitativeValueId2> valueList = new ArrayList<QualitativeValueId2>(38); + + /** + * Initializes the values. + */ + static { + synchronized (QualitativeValueId2.values) { + QualitativeValueId2.values.put(SEX_UNDEFINED.enumValue, SEX_UNDEFINED); + QualitativeValueId2.values.put(MATURITY_1.enumValue, MATURITY_1); + QualitativeValueId2.values.put(MATURITY_2.enumValue, MATURITY_2); + QualitativeValueId2.values.put(MATURITY_3.enumValue, MATURITY_3); + QualitativeValueId2.values.put(MATURITY_4.enumValue, MATURITY_4); + QualitativeValueId2.values.put(MATURITY_5.enumValue, MATURITY_5); + } + synchronized (QualitativeValueId2.valueList) { + QualitativeValueId2.valueList.add(SEX_UNDEFINED); + QualitativeValueId2.valueList.add(MATURITY_1); + QualitativeValueId2.valueList.add(MATURITY_2); + QualitativeValueId2.valueList.add(MATURITY_3); + QualitativeValueId2.valueList.add(MATURITY_4); + QualitativeValueId2.valueList.add(MATURITY_5); + // For Adagio, lists could be reload from configuration + // QualitativeValueId.valueList = Collections.unmodifiableList(valueList); + } + synchronized (QualitativeValueId2.literals) { + QualitativeValueId2.literals.add(SEX_UNDEFINED.enumValue); + QualitativeValueId2.literals.add(MATURITY_1.enumValue); + QualitativeValueId2.literals.add(MATURITY_2.enumValue); + QualitativeValueId2.literals.add(MATURITY_3.enumValue); + QualitativeValueId2.literals.add(MATURITY_4.enumValue); + QualitativeValueId2.literals.add(MATURITY_5.enumValue); + // For Adagio, lists could be reload from configuration + // QualitativeValueId.literals = Collections.unmodifiableList(literals); + } + synchronized (QualitativeValueId2.names) { + QualitativeValueId2.names.add("SEX_UNDEFINED"); + QualitativeValueId2.names.add("MATURITY_1"); + QualitativeValueId2.names.add("MATURITY_2"); + QualitativeValueId2.names.add("MATURITY_3"); + QualitativeValueId2.names.add("MATURITY_4"); + QualitativeValueId2.names.add("MATURITY_5"); + QualitativeValueId2.names = Collections.unmodifiableList(names); + } + } +} \ No newline at end of file Property changes on: trunk/tutti-persistence/src/main/java/fr/ifremer/adagio/core/dao/referential/pmfm/QualitativeValueId2.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision Added: svn:eol-style + native Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -27,10 +27,10 @@ import com.google.common.base.Predicate; import com.google.common.collect.Maps; import com.google.common.collect.Multimap; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.CaracteristicMap; import fr.ifremer.tutti.persistence.entities.TuttiEntities; import fr.ifremer.tutti.persistence.entities.data.AccidentalBatch; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.BatchContainer; import fr.ifremer.tutti.persistence.entities.data.BenthosBatch; @@ -67,7 +67,6 @@ import fr.ifremer.tutti.persistence.service.ReferentialPersistenceService; import fr.ifremer.tutti.persistence.service.SpeciesBatchPersistenceService; import fr.ifremer.tutti.persistence.service.TechnicalPersistenceService; -import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; import fr.ifremer.tutti.persistence.service.TuttiPersistenceServiceLocator; import org.apache.commons.lang3.StringUtils; import org.apache.commons.logging.Log; @@ -143,11 +142,6 @@ } @Override - public TuttiEnumerationFile getEnumerationFile() { - return technicalPersistenceService.getEnumerationFile(); - } - - @Override public <V> V invoke(Callable<V> call) { return technicalPersistenceService.invoke(call); } @@ -173,11 +167,6 @@ } @Override - public void clearCache(String cacheName) { - technicalPersistenceService.clearCache(cacheName); - } - - @Override public void init() { if (log.isInfoEnabled()) { log.info("Open persistence driver " + getImplementationName()); @@ -474,7 +463,7 @@ //------------------------------------------------------------------------// @Override - public List<Attachment> getAllAttachments(AttachementObjectTypeEnum objectType, + public List<Attachment> getAllAttachments(ObjectTypeCode2 objectType, Integer objectId) { return attachmentService.getAllAttachments(objectType, objectId); } @@ -500,7 +489,7 @@ } @Override - public void deleteAllAttachment(AttachementObjectTypeEnum objectType, Integer... objectIds) { + public void deleteAllAttachment(ObjectTypeCode2 objectType, Integer... objectIds) { attachmentService.deleteAllAttachment(objectType, objectIds); } Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceNoDbImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceNoDbImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceNoDbImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -26,9 +26,9 @@ import com.google.common.base.Predicate; import com.google.common.collect.Multimap; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.CaracteristicMap; import fr.ifremer.tutti.persistence.entities.data.AccidentalBatch; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.BatchContainer; import fr.ifremer.tutti.persistence.entities.data.BenthosBatch; @@ -51,7 +51,6 @@ import fr.ifremer.tutti.persistence.entities.referential.TuttiLocation; import fr.ifremer.tutti.persistence.entities.referential.TuttiReferentialEntity; import fr.ifremer.tutti.persistence.entities.referential.Vessel; -import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; import org.nuiton.util.Version; import java.io.File; @@ -74,11 +73,6 @@ } @Override - public TuttiEnumerationFile getEnumerationFile() { - throw notImplemented(); - } - - @Override public <V> V invoke(Callable<V> call) { throw notImplemented(); } @@ -107,10 +101,6 @@ public void clearAllCaches() { throw notImplemented(); } - @Override - public void clearCache(String cacheName) { - throw notImplemented(); - } @Override public List<TuttiLocation> getAllProgramZone() { @@ -625,7 +615,7 @@ } @Override - public List<Attachment> getAllAttachments(AttachementObjectTypeEnum objectType, + public List<Attachment> getAllAttachments(ObjectTypeCode2 objectType, Integer objectId) { throw notImplemented(); } @@ -688,7 +678,7 @@ } @Override - public void deleteAllAttachment(AttachementObjectTypeEnum objectType, Integer... objectIds) { + public void deleteAllAttachment(ObjectTypeCode2 objectType, Integer... objectIds) { throw notImplemented(); } Deleted: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/data/AttachementObjectTypeEnum.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/data/AttachementObjectTypeEnum.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/data/AttachementObjectTypeEnum.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -1,97 +0,0 @@ -package fr.ifremer.tutti.persistence.entities.data; - -/* - * #%L - * Tutti :: Persistence - * $Id$ - * $HeadURL$ - * %% - * Copyright (C) 2012 - 2013 Ifremer - * %% - * This program is free software: you can redistribute it and/or modify - * it under the terms of the GNU General Public License as - * published by the Free Software Foundation, either version 3 of the - * License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public - * License along with this program. If not, see - * <http://www.gnu.org/licenses/gpl-3.0.html>. - * #L% - */ - -import com.google.common.base.Preconditions; -import fr.ifremer.adagio.core.dao.referential.ObjectType; -import fr.ifremer.tutti.persistence.entities.TuttiEnumerable; -import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; - -/** - * Define all usable {@link ObjectType} in {@link Attachment}. - * - * Note: This enumeration implements {@link TuttiEnumerable}, - * so all values must be synched to the enumeration file and before usage we - * must be invoke the {@link TuttiEnumerationFile#init()} method. - * - * @author tchemit <chemit(a)codelutin.com> - * @see Attachment#getObjectType() - * @since 1.0.2 - */ -public enum AttachementObjectTypeEnum implements TuttiEnumerable<String> { - - /** For cruise only. */ - SCIENTIFIC_CRUISE("OBJECT_TYPE_SCIENTIFIC_CRUISE"), - - /** For {@link FishingOperation} only. */ - OPERATION("OBJECT_TYPE_OPERATION"), - - /** For {@link CatchBatch} only. */ - CATCH_BATCH("OBJECT_TYPE_CATCH_BATCH"), - - /** For batch only ({@link SpeciesBatch} / {@link BenthosBatch} / {@link MarineLitterBatch}). */ - BATCH("OBJECT_TYPE_BATCH"), - - /** For sample only ({@link AccidentalBatch} / {@link IndividualObservationBatch}).. */ - SAMPLE("OBJECT_TYPE_SAMPLE"); - - private final String fieldName; - - private String fieldValue; - - private boolean init; - - AttachementObjectTypeEnum(String fieldName) { - this.fieldName = fieldName; - } - - @Override - public String getFieldName() { - return fieldName; - } - - @Override - public String getFieldValue() { - Preconditions.checkState( - isInit(), - "Enumeration " + getClass() + " was not init!"); - return fieldValue; - } - - @Override - public void setFieldValue(String fieldValue) { - this.fieldValue = fieldValue; - } - - @Override - public boolean isInit() { - return init; - } - - @Override - public void setInit(boolean init) { - this.init = init; - } -} Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocols.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocols.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocols.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -31,7 +31,8 @@ import com.google.common.base.Joiner; import com.google.common.collect.Lists; import com.google.common.io.Files; -import org.nuiton.jaxx.application.ApplicationTechnicalException; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; import fr.ifremer.tutti.persistence.TuttiPersistence; import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; import fr.ifremer.tutti.persistence.entities.protocol.v1.SpeciesProtocol1; @@ -40,12 +41,12 @@ import fr.ifremer.tutti.persistence.entities.protocol.v1.TuttiProtocolBean1; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.persistence.entities.referential.Species; -import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; import org.apache.commons.collections.CollectionUtils; import org.apache.commons.io.IOUtils; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.nuiton.decorator.Decorator; +import org.nuiton.jaxx.application.ApplicationTechnicalException; import org.nuiton.util.beans.Binder; import org.nuiton.util.beans.BinderFactory; @@ -88,7 +89,7 @@ } } - public static TuttiProtocol fromFile(TuttiEnumerationFile enumeration, File file) { + public static TuttiProtocol fromFile(File file) { Reader fileReader = null; try { @@ -99,7 +100,7 @@ // transform String to Integer... - Integer sampleCategoryIdToRemove = enumeration.PMFM_ID_SORTED_UNSORTED; + Integer sampleCategoryIdToRemove = PmfmId2.SORTED_UNSORTED.getValue(); if (!result.isBenthosEmpty()) { for (SpeciesProtocol speciesProtocol : result.getBenthos()) { @@ -130,7 +131,7 @@ // try to load a v1 TuttiProtocol1 tuttiProtocol1 = fromFileV1(file); - TuttiProtocol result = fromTuttiProtocol1(enumeration, tuttiProtocol1); + TuttiProtocol result = fromTuttiProtocol1(tuttiProtocol1); return result; } finally { @@ -249,7 +250,7 @@ return message; } - protected static TuttiProtocol fromTuttiProtocol1(TuttiEnumerationFile enumeration, TuttiProtocol1 tuttiProtocol1) { + protected static TuttiProtocol fromTuttiProtocol1(TuttiProtocol1 tuttiProtocol1) { TuttiProtocol result = newTuttiProtocol(); Binder<TuttiProtocol1, TuttiProtocol> binder = BinderFactory.newBinder(TuttiProtocol1.class, TuttiProtocol.class); binder.copy(tuttiProtocol1, result); @@ -261,16 +262,16 @@ row.setMandatorySampleCategoryId(Lists.<Integer>newArrayList()); binderSpecies.copy(speciesProtocol1, row); if (speciesProtocol1.isAgeEnabled()) { - row.addMandatorySampleCategoryId(enumeration.PMFM_ID_AGE); + row.addMandatorySampleCategoryId(PmfmId2.AGE.getValue()); } if (speciesProtocol1.isSizeEnabled()) { - row.addMandatorySampleCategoryId(enumeration.PMFM_ID_SIZE_CATEGORY); + row.addMandatorySampleCategoryId(PmfmId2.SIZE_CATEGORY.getValue()); } if (speciesProtocol1.isMaturityEnabled()) { - row.addMandatorySampleCategoryId(enumeration.PMFM_ID_MATURITY); + row.addMandatorySampleCategoryId(PmfmId2.MATURITY.getValue()); } if (speciesProtocol1.isSexEnabled()) { - row.addMandatorySampleCategoryId(enumeration.PMFM_ID_SEX); + row.addMandatorySampleCategoryId(PmfmId2.SEX.getValue()); } result.addSpecies(row); } @@ -283,16 +284,16 @@ row.setMandatorySampleCategoryId(Lists.<Integer>newArrayList()); binderSpecies.copy(speciesProtocol1, row); if (speciesProtocol1.isAgeEnabled()) { - row.addMandatorySampleCategoryId(enumeration.PMFM_ID_AGE); + row.addMandatorySampleCategoryId(PmfmId2.AGE.getValue()); } if (speciesProtocol1.isSizeEnabled()) { - row.addMandatorySampleCategoryId(enumeration.PMFM_ID_SIZE_CATEGORY); + row.addMandatorySampleCategoryId(PmfmId2.SIZE_CATEGORY.getValue()); } if (speciesProtocol1.isMaturityEnabled()) { - row.addMandatorySampleCategoryId(enumeration.PMFM_ID_MATURITY); + row.addMandatorySampleCategoryId(PmfmId2.MATURITY.getValue()); } if (speciesProtocol1.isSexEnabled()) { - row.addMandatorySampleCategoryId(enumeration.PMFM_ID_SEX); + row.addMandatorySampleCategoryId(PmfmId2.SEX.getValue()); } result.addBenthos(row); } Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AbstractPersistenceService.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AbstractPersistenceService.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AbstractPersistenceService.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -65,9 +65,6 @@ @Resource protected SessionFactory sessionFactory; - @Resource(name = "tuttiEnumerationFile") - protected TuttiEnumerationFile enumeration; - @Resource(name = "tuttiConfiguration") protected TuttiConfiguration config; Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AccidentalBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AccidentalBatchPersistenceServiceImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AccidentalBatchPersistenceServiceImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -27,13 +27,18 @@ import com.google.common.base.Preconditions; import com.google.common.collect.Lists; import fr.ifremer.adagio.core.dao.administration.programStrategy.Program; +import fr.ifremer.adagio.core.dao.administration.user.DepartmentId; import fr.ifremer.adagio.core.dao.administration.user.DepartmentImpl; +import fr.ifremer.adagio.core.dao.administration.user.PersonId; import fr.ifremer.adagio.core.dao.administration.user.PersonImpl; import fr.ifremer.adagio.core.dao.data.operation.FishingOperationImpl; import fr.ifremer.adagio.core.dao.data.sample.Sample; +import fr.ifremer.adagio.core.dao.referential.QualityFlagCode; import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; import fr.ifremer.adagio.core.dao.referential.pmfm.Matrix; +import fr.ifremer.adagio.core.dao.referential.pmfm.MatrixId2; import fr.ifremer.adagio.core.dao.referential.pmfm.MatrixImpl; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxonImpl; import fr.ifremer.adagio.core.dao.technical.synchronization.SynchronizationStatus; import fr.ifremer.tutti.persistence.entities.CaracteristicMap; @@ -202,14 +207,14 @@ target.setLabel(label); // Matrix (product / batch) - Matrix matrix = load(MatrixImpl.class, enumeration.MATRIX_ID_PRODUCT_BATCH); + Matrix matrix = load(MatrixImpl.class, MatrixId2.PRODUCT_BATCH.getValue()); target.setMatrix(matrix); // IndividualCount target.setIndividualCount((short) 1); // Quality Flag - target.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + target.setQualityFlag(load(QualityFlagImpl.class, QualityFlagCode.NOTQUALIFIED.getValue())); // Sample Date if (target.getSampleDate() == null) { @@ -221,11 +226,11 @@ // Recorder Departement target.setRecorderDepartment(load(DepartmentImpl.class, - enumeration.DEPARTMENT_ID_UNKNOWN_RECORDER_DEPARTMENT)); + DepartmentId.UNKOWN_RECODER_DEPARTMENT.getValue())); // Recorder Person target.setRecorderPerson(load(PersonImpl.class, - enumeration.PERSON_ID_UNKNOWN_RECORDER_PERSON)); + PersonId.UNKNOWN_RECORDER_PERSON.getValue())); // Program Program program = fishingOperation.getFishingTrip().getProgram(); @@ -281,7 +286,7 @@ if (source.getLengthStepCaracteristic() != null) { Caracteristic caracteristic = referentialService.getCaracteristic( - enumeration.PMFM_ID_ID_PSFM); + PmfmId2.ID_PSFM.getValue()); caracteristics.put(caracteristic, source.getLengthStepCaracteristic().getId()); @@ -317,12 +322,12 @@ batch.setGender(genderValue); } - Float weight = (Float) result.remove(referentialService.getCaracteristic(enumeration.PMFM_ID_WEIGHT_MEASURED)); + Float weight = (Float) result.remove(referentialService.getCaracteristic(PmfmId2.WEIGHT_MEASURED.getValue())); if (weight != null) { batch.setWeight(weight); } - String lengthClassId = (String) result.remove(referentialService.getCaracteristic(enumeration.PMFM_ID_ID_PSFM)); + String lengthClassId = (String) result.remove(referentialService.getCaracteristic(PmfmId2.ID_PSFM.getValue())); if (lengthClassId != null) { Caracteristic lengthStepCaracteristic = referentialService.getCaracteristic(Integer.valueOf(lengthClassId)); batch.setLengthStepCaracteristic(lengthStepCaracteristic); Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AttachmentPersistenceService.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AttachmentPersistenceService.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AttachmentPersistenceService.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -24,8 +24,8 @@ * #L% */ +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.TuttiPersistenceServiceImplementor; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; import org.springframework.transaction.annotation.Transactional; @@ -47,9 +47,9 @@ * @param objectType type of object. * @param objectId id of the object * @return list of all attachments for the given {@code objectId}. - * (see {@link AttachementObjectTypeEnum}) + * (see {@link ObjectTypeCode2}) */ - List<Attachment> getAllAttachments(AttachementObjectTypeEnum objectType, + List<Attachment> getAllAttachments(ObjectTypeCode2 objectType, Integer objectId); /** @@ -96,7 +96,7 @@ * @param objectIds ids of object */ @Transactional(readOnly = false) - void deleteAllAttachment(AttachementObjectTypeEnum objectType, + void deleteAllAttachment(ObjectTypeCode2 objectType, Integer... objectIds); } Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AttachmentPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AttachmentPersistenceServiceImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AttachmentPersistenceServiceImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -29,8 +29,9 @@ import fr.ifremer.adagio.core.dao.data.measure.file.MeasurementFile; import fr.ifremer.adagio.core.dao.data.measure.file.MeasurementFileDao; import fr.ifremer.adagio.core.dao.referential.ObjectTypeImpl; +import fr.ifremer.adagio.core.dao.referential.QualityFlagCode; import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.Attachments; import org.apache.commons.lang3.ObjectUtils; @@ -90,12 +91,12 @@ //------------------------------------------------------------------------// @Override - public List<Attachment> getAllAttachments(AttachementObjectTypeEnum objectType, + public List<Attachment> getAllAttachments(ObjectTypeCode2 objectType, Integer objectId) { Iterator<Object[]> list = queryList( "allAttachment", "objectId", IntegerType.INSTANCE, objectId, - "objectTypeCode", StringType.INSTANCE, objectType.getFieldValue() + "objectTypeCode", StringType.INSTANCE, objectType.getValue() ); List<Attachment> result = Lists.newArrayList(); @@ -142,10 +143,10 @@ measurementFile.setPmfm(null); // set not qualifed flag - measurementFile.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + measurementFile.setQualityFlag(load(QualityFlagImpl.class, QualityFlagCode.NOTQUALIFIED.getValue())); // set objectType - measurementFile.setObjectType(load(ObjectTypeImpl.class, attachment.getObjectType().getFieldValue())); + measurementFile.setObjectType(load(ObjectTypeImpl.class, attachment.getObjectType().getValue())); // set objectId measurementFile.setObjectId(attachment.getObjectId()); @@ -205,7 +206,7 @@ // can't change the objectType String oldObjectTypeCode = measurementFile.getObjectType().getCode(); - if (ObjectUtils.notEqual(attachment.getObjectType().getFieldValue(), + if (ObjectUtils.notEqual(attachment.getObjectType().getValue(), oldObjectTypeCode)) { throw new InvalidDataAccessResourceUsageException( "Can't change objectType, was before " + oldObjectTypeCode); @@ -244,8 +245,7 @@ } @Override - public void deleteAllAttachment(AttachementObjectTypeEnum objectType, - Integer... objectIds) { + public void deleteAllAttachment(ObjectTypeCode2 objectType, Integer... objectIds) { for (Integer objectId : objectIds) { List<Attachment> attachments = getAllAttachments(objectType, objectId); for (Attachment attachment : attachments) { @@ -261,7 +261,7 @@ protected void loadAttachment(Object[] source, Attachment target) { - target.setObjectType(AttachementObjectTypeEnum.valueOf((String) source[0])); + target.setObjectType(ObjectTypeCode2.valueOf((String) source[0])); target.setObjectId((Integer) source[1]); target.setId(String.valueOf(source[2])); target.setPath((String) source[3]); Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -35,7 +35,9 @@ import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; import fr.ifremer.adagio.core.dao.referential.QualityFlag; +import fr.ifremer.adagio.core.dao.referential.QualityFlagCode; import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxon; import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxonImpl; import fr.ifremer.tutti.persistence.InvalidBatchModelException; @@ -414,7 +416,7 @@ } QualityFlag qualityFlag = source.getQualityFlag(); - target.setSpeciesToConfirm(qualityFlag != null && enumeration.QUALITY_FLAG_CODE_DOUBTFUL.equals(qualityFlag.getCode())); + target.setSpeciesToConfirm(qualityFlag != null && QualityFlagCode.DOUBTFUL.getValue().equals(qualityFlag.getCode())); return target; } @@ -516,7 +518,7 @@ if (source.getSampleCategoryId() != null && source.getSampleCategoryValue() != null) { Integer pmfmId = source.getSampleCategoryId(); // Do not store sorting measurement if pmfm = SORTED (already store in an ancestor batch) - if (!pmfmId.equals(enumeration.PMFM_ID_SORTED_UNSORTED)) { + if (!pmfmId.equals(PmfmId2.SORTED_UNSORTED.getValue())) { SortingMeasurement sortingMeasurement = measurementPersistenceHelper.setSortingMeasurement( target, pmfmId, @@ -540,9 +542,9 @@ // QualityFlag String qualityFlag; if (source.isSpeciesToConfirm()) { - qualityFlag = enumeration.QUALITY_FLAG_CODE_DOUBTFUL; + qualityFlag = QualityFlagCode.DOUBTFUL.getValue(); } else { - qualityFlag = enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED; + qualityFlag = QualityFlagCode.NOTQUALIFIED.getValue(); } target.setQualityFlag(load(QualityFlagImpl.class, qualityFlag)); Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -31,6 +31,7 @@ import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; import fr.ifremer.adagio.core.dao.data.operation.FishingOperationImpl; +import fr.ifremer.adagio.core.dao.referential.QualityFlagCode; import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; import fr.ifremer.adagio.core.dao.technical.synchronization.SynchronizationStatus; import fr.ifremer.tutti.persistence.entities.data.CatchBatch; @@ -266,7 +267,7 @@ Integer fishingOperationId = source.getFishingOperation().getIdAsInt(); target.setFishingOperation(load(FishingOperationImpl.class, fishingOperationId)); - target.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + target.setQualityFlag(load(QualityFlagImpl.class, QualityFlagCode.NOTQUALIFIED.getValue())); target.setRankOrder((short) 1); // SynchronizationStatus Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceService.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceService.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceService.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -32,7 +32,6 @@ import java.util.Collection; import java.util.List; -import java.util.Set; /** * CRUD of {@link Cruise} entity. Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -32,6 +32,7 @@ import fr.ifremer.adagio.core.dao.administration.programStrategy.ProgramDao; import fr.ifremer.adagio.core.dao.administration.programStrategy.ProgramImpl; import fr.ifremer.adagio.core.dao.administration.user.PersonDao; +import fr.ifremer.adagio.core.dao.administration.user.PersonId; import fr.ifremer.adagio.core.dao.administration.user.PersonImpl; import fr.ifremer.adagio.core.dao.data.measure.GearPhysicalMeasurement; import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; @@ -43,14 +44,17 @@ import fr.ifremer.adagio.core.dao.data.vessel.feature.person.VesselPersonFeatures; import fr.ifremer.adagio.core.dao.data.vessel.feature.physical.GearPhysicalFeatures; import fr.ifremer.adagio.core.dao.referential.QualityFlag; +import fr.ifremer.adagio.core.dao.referential.QualityFlagCode; import fr.ifremer.adagio.core.dao.referential.QualityFlagDao; import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; import fr.ifremer.adagio.core.dao.referential.VesselPersonRole; +import fr.ifremer.adagio.core.dao.referential.VesselPersonRoleId; import fr.ifremer.adagio.core.dao.referential.gear.GearDao; import fr.ifremer.adagio.core.dao.referential.location.Location; import fr.ifremer.adagio.core.dao.referential.location.LocationDao; import fr.ifremer.adagio.core.dao.referential.location.LocationImpl; import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmDao; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValue; import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueDao; import fr.ifremer.tutti.persistence.dao.GearPhysicalFeaturesDaoTutti; @@ -179,7 +183,7 @@ Object[] source = queryUnique( "cruise", "cruiseId", IntegerType.INSTANCE, Integer.valueOf(id), - "pmfmIdSurveyPart", IntegerType.INSTANCE, enumeration.PMFM_ID_SURVEY_PART); + "pmfmIdSurveyPart", IntegerType.INSTANCE, PmfmId2.SURVEY_PART.getValue()); if (source == null) { throw new DataRetrievalFailureException("Could not retrieve cruise with id=" + id); @@ -242,7 +246,7 @@ Iterator<Object[]> list = queryList( "allCruiseGears", "cruiseId", IntegerType.INSTANCE, Integer.valueOf(id), - "pmfmIdTrawlNet", IntegerType.INSTANCE, enumeration.PMFM_ID_MULTIRIG_NUMBER); + "pmfmIdTrawlNet", IntegerType.INSTANCE, PmfmId2.MULTIRIG_NUMBER.getValue()); List<GearWithOriginalRankOrder> gears = Lists.newArrayList(); int maxMultirigNumberFound = 0; @@ -272,10 +276,10 @@ Integer personId = (Integer) vesselPersonFeatures[0]; Person person = referentialService.getPerson(personId); Integer roleId = (Integer) vesselPersonFeatures[1]; - if (enumeration.VESSEL_PERSON_ROLE_ID_SCIENTIFIC_CRUISE_MANAGER.equals(roleId)) { + if (VesselPersonRoleId.SCIENTIFIC_CRUISE_MANAGER.getValue().equals(roleId)) { headOfMissions.add(person); - } else if (enumeration.VESSEL_PERSON_ROLE_ID_SORT_ROOM_MANAGER.equals(roleId)) { + } else if (VesselPersonRoleId.SORT_ROOM_MANAGER.getValue().equals(roleId)) { headOfSortRoom.add(person); } } @@ -399,7 +403,7 @@ GearPhysicalMeasurement measurement = list.next(); Integer pmfmId = measurement.getPmfm().getId(); - if (!enumeration.PMFM_ID_MULTIRIG_NUMBER.equals(pmfmId)) { + if (!PmfmId2.MULTIRIG_NUMBER.getValue().equals(pmfmId)) { Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); Serializable value = null; @@ -462,7 +466,7 @@ if (gpf.getGearPhysicalMeasurements() != null) { for (GearPhysicalMeasurement measurement : gpf.getGearPhysicalMeasurements()) { Integer pmfmId = measurement.getPmfm().getId(); - if (!enumeration.PMFM_ID_MULTIRIG_NUMBER.equals(pmfmId)) { + if (!PmfmId2.MULTIRIG_NUMBER.getValue().equals(pmfmId)) { measurementsToRemove.add(pmfmId); } } @@ -554,7 +558,7 @@ protected void cruiseToEntity(Cruise source, ScientificCruise target) { QualityFlag qualityFlagNotQualified = load( - QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED); + QualityFlagImpl.class, QualityFlagCode.NOTQUALIFIED.getValue()); // Retrieve entities : FishingTrip ObservedFishingTrip fishingTrip; @@ -593,7 +597,7 @@ // Optional values in UI, but mandatory in DB if (target.getManagerPerson() == null) { - target.setManagerPerson(load(PersonImpl.class, enumeration.PERSON_ID_UNKNOWN_RECORDER_PERSON)); + target.setManagerPerson(load(PersonImpl.class, PersonId.UNKNOWN_RECORDER_PERSON.getValue())); } // Default values : @@ -629,11 +633,11 @@ if (StringUtils.isEmpty(source.getSurveyPart())) { // remove surveyMeasurement if exists - measurementPersistenceHelper.removeSurveyMeasurement(fishingTrip, enumeration.PMFM_ID_SURVEY_PART); + measurementPersistenceHelper.removeSurveyMeasurement(fishingTrip, PmfmId2.SURVEY_PART.getValue()); } else { // update it or create it - measurementPersistenceHelper.setSurveyMeasurement(fishingTrip, enumeration.PMFM_ID_SURVEY_PART, null, source.getSurveyPart(), null); + measurementPersistenceHelper.setSurveyMeasurement(fishingTrip, PmfmId2.SURVEY_PART.getValue(), null, source.getSurveyPart(), null); } // Gear @@ -687,9 +691,9 @@ // Trawl net (store in Gear Physical features) if (source.getMultirigNumber() == null) { - gearPhysicalFeaturesDao.removeGearPhysicalMeasurement(guf, enumeration.PMFM_ID_MULTIRIG_NUMBER); + gearPhysicalFeaturesDao.removeGearPhysicalMeasurement(guf, PmfmId2.MULTIRIG_NUMBER.getValue()); } else { - gearPhysicalFeaturesDao.setGearPhysicalMeasurement(target, guf, enumeration.PMFM_ID_MULTIRIG_NUMBER, Float.valueOf(source.getMultirigNumber()), null, null); + gearPhysicalFeaturesDao.setGearPhysicalMeasurement(target, guf, PmfmId2.MULTIRIG_NUMBER.getValue(), Float.valueOf(source.getMultirigNumber()), null, null); } } Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -53,16 +53,21 @@ import fr.ifremer.adagio.core.dao.data.vessel.feature.use.VesselUseFeatures; import fr.ifremer.adagio.core.dao.data.vessel.feature.use.isActive; import fr.ifremer.adagio.core.dao.data.vessel.position.VesselPosition; +import fr.ifremer.adagio.core.dao.referential.QualityFlagCode; import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; import fr.ifremer.adagio.core.dao.referential.VesselPersonRole; +import fr.ifremer.adagio.core.dao.referential.VesselPersonRoleId; import fr.ifremer.adagio.core.dao.referential.gear.GearImpl; import fr.ifremer.adagio.core.dao.referential.location.LocationExtendDao; import fr.ifremer.adagio.core.dao.referential.location.LocationImpl; +import fr.ifremer.adagio.core.dao.referential.location.LocationLevelId; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueId; import fr.ifremer.adagio.core.dao.technical.synchronization.SynchronizationStatus; import fr.ifremer.adagio.core.service.referential.location.LocationService; import fr.ifremer.tutti.persistence.dao.GearPhysicalFeaturesDaoTutti; import fr.ifremer.tutti.persistence.entities.CaracteristicMap; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.FishingOperation; import fr.ifremer.tutti.persistence.entities.data.FishingOperations; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; @@ -199,8 +204,8 @@ Iterator<Object[]> list = queryList( "allFishingOperations", "cruiseId", IntegerType.INSTANCE, Integer.valueOf(cruiseId), - "pmfmIdStationNumber", IntegerType.INSTANCE, enumeration.PMFM_ID_STATION_NUMBER, - "pmfmIdMultirigAggregation", IntegerType.INSTANCE, enumeration.PMFM_ID_MULTIRIG_AGGREGATION + "pmfmIdStationNumber", IntegerType.INSTANCE, PmfmId2.STATION_NUMBER.getValue(), + "pmfmIdMultirigAggregation", IntegerType.INSTANCE, PmfmId2.MULTIRIG_AGGREGATION.getValue() ); List<FishingOperation> result = Lists.newArrayList(); @@ -261,9 +266,9 @@ Object[] source = queryUnique( "fishingOperation", "fishingOperationId", IntegerType.INSTANCE, Integer.valueOf(id), - "locationLevelIdStrata", IntegerType.INSTANCE, enumeration.LOCATION_LEVEL_ID_STRATA, - "locationLevelIdSubStrata", IntegerType.INSTANCE, enumeration.LOCATION_LEVEL_ID_SUB_STRATA, - "locationLevelIdLocalite", IntegerType.INSTANCE, enumeration.LOCATION_LEVEL_ID_LOCALITE + "locationLevelIdStrata", IntegerType.INSTANCE, LocationLevelId.SCIENTIFIC_CRUISE_STRATA.getValue(), + "locationLevelIdSubStrata", IntegerType.INSTANCE, LocationLevelId.SCIENTIFIC_CRUISE_SUB_STRATA.getValue(), + "locationLevelIdLocalite", IntegerType.INSTANCE, LocationLevelId.SCIENTIFIC_CRUISE_LOCALITE.getValue() ); if (source == null) { @@ -314,7 +319,7 @@ Integer personId = (Integer) vesselPersonFeatures[0]; Person person = referentialService.getPerson(personId); Integer roleId = (Integer) vesselPersonFeatures[1]; - if (enumeration.VESSEL_PERSON_ROLE_ID_RECORDER_PERSON.equals(roleId)) { + if (VesselPersonRoleId.RECORDER_PERSON.getValue().equals(roleId)) { result.addRecorderPerson(person); } } @@ -608,7 +613,7 @@ getCurrentSession().flush(); attachmentPersistenceService.deleteAllAttachment( - AttachementObjectTypeEnum.OPERATION, + ObjectTypeCode2.OPERATION, fishingOperationId); } @@ -633,26 +638,26 @@ Integer qualitativeValueId = (Integer) source[colIndex]; // Trawl distance - if (enumeration.PMFM_ID_TRAWL_DISTANCE.equals(pmfmId)) { + if (PmfmId2.TRAWL_DISTANCE.getValue().equals(pmfmId)) { result.setTrawlDistance(numericalValue); } // Rectilinear operation ? - else if (enumeration.PMFM_ID_RECTILINEAR_OPERATION.equals(pmfmId)) { - result.setFishingOperationRectiligne(enumeration.QUALITATIVE_RECTILINEAR_OPERATION_YES.equals(qualitativeValueId)); + else if (PmfmId2.RECTILINEAR_OPERATION.getValue().equals(pmfmId)) { + result.setFishingOperationRectiligne(QualitativeValueId.RECTILINEAR_OPERATION_YES.getValue().equals(qualitativeValueId)); } // Haul valid ? - else if (enumeration.PMFM_ID_HAUL_VALID.equals(pmfmId)) { + else if (PmfmId2.HAUL_VALID.getValue().equals(pmfmId)) { if (qualitativeValueId != null) { - result.setFishingOperationValid(enumeration.QUALITATIVE_HAUL_VALID_YES.equals(qualitativeValueId)); + result.setFishingOperationValid(QualitativeValueId.HAUL_VALID_YES.getValue().equals(qualitativeValueId)); } else { result.setFishingOperationValid(null); } } // Station Number : - else if (enumeration.PMFM_ID_STATION_NUMBER.equals(pmfmId)) { + else if (PmfmId2.STATION_NUMBER.getValue().equals(pmfmId)) { result.setStationNumber(alphanumericalValue); } @@ -699,7 +704,7 @@ Integer qualitativeValueId = (Integer) source[colIndex]; // Trawl net number - if (enumeration.PMFM_ID_MULTIRIG_AGGREGATION.equals(pmfmId) + if (PmfmId2.MULTIRIG_AGGREGATION.getValue().equals(pmfmId) && alphanumericalValue != null && alphanumericalValue.matches("\\d+")) { result.setMultirigAggregation(alphanumericalValue); @@ -870,7 +875,7 @@ // Retrieve multirig number, from Gear physical features int cruiseMultirigCount = 1; // default value if (gearPhysicalFeatures != null) { - GearPhysicalMeasurement gpmMultirigCount = gearPhysicalFeaturesDao.getGearPhysicalMeasurement(gearPhysicalFeatures, enumeration.PMFM_ID_MULTIRIG_NUMBER); + GearPhysicalMeasurement gpmMultirigCount = gearPhysicalFeaturesDao.getGearPhysicalMeasurement(gearPhysicalFeatures, PmfmId2.MULTIRIG_NUMBER.getValue()); if (gpmMultirigCount != null && gpmMultirigCount.getNumericalValue() != null) { cruiseMultirigCount = gpmMultirigCount.getNumericalValue().intValue(); } @@ -878,7 +883,7 @@ // StationNumber if (source.getStationNumber() != null) { - VesselUseMeasurement vum = measurementPersistenceHelper.setVesselUseMeasurement(scientificCruise, vesselUseFeatures, enumeration.PMFM_ID_STATION_NUMBER, null, source.getStationNumber(), null); + VesselUseMeasurement vum = measurementPersistenceHelper.setVesselUseMeasurement(scientificCruise, vesselUseFeatures, PmfmId2.STATION_NUMBER.getValue(), null, source.getStationNumber(), null); notChangedVesselUseMeasurements.remove(vum); } @@ -897,7 +902,7 @@ } // Store into Gear Use Features - GearUseMeasurement gum = measurementPersistenceHelper.setGearUseMeasurement(scientificCruise, gearUseFeatures, enumeration.PMFM_ID_MULTIRIG_AGGREGATION, null, source.getMultirigAggregation(), null); + GearUseMeasurement gum = measurementPersistenceHelper.setGearUseMeasurement(scientificCruise, gearUseFeatures, PmfmId2.MULTIRIG_AGGREGATION.getValue(), null, source.getMultirigAggregation(), null); notChangedGearUseMeasurements.remove(gum); } @@ -925,19 +930,19 @@ // Trawl distance if (source.getTrawlDistance() != null) { - VesselUseMeasurement vum = measurementPersistenceHelper.setVesselUseMeasurement(scientificCruise, vesselUseFeatures, enumeration.PMFM_ID_TRAWL_DISTANCE, source.getTrawlDistance(), null, null); + VesselUseMeasurement vum = measurementPersistenceHelper.setVesselUseMeasurement(scientificCruise, vesselUseFeatures, PmfmId2.TRAWL_DISTANCE.getValue(), source.getTrawlDistance(), null, null); notChangedVesselUseMeasurements.remove(vum); } // Rectilinear operation { - VesselUseMeasurement vum = measurementPersistenceHelper.setVesselUseMeasurement(scientificCruise, vesselUseFeatures, enumeration.PMFM_ID_RECTILINEAR_OPERATION, null, null, source.isFishingOperationRectiligne() ? enumeration.QUALITATIVE_RECTILINEAR_OPERATION_YES : enumeration.QUALITATIVE_RECTILINEAR_OPERATION_NO); + VesselUseMeasurement vum = measurementPersistenceHelper.setVesselUseMeasurement(scientificCruise, vesselUseFeatures, PmfmId2.RECTILINEAR_OPERATION.getValue(), null, null, source.isFishingOperationRectiligne() ? QualitativeValueId.RECTILINEAR_OPERATION_YES.getValue() : QualitativeValueId.RECTILINEAR_OPERATION_NO.getValue()); notChangedVesselUseMeasurements.remove(vum); } // Operation is valid ? if (source.getFishingOperationValid() != null) { - VesselUseMeasurement vum = measurementPersistenceHelper.setVesselUseMeasurement(scientificCruise, vesselUseFeatures, enumeration.PMFM_ID_HAUL_VALID, null, null, source.getFishingOperationValid() ? enumeration.QUALITATIVE_HAUL_VALID_YES : enumeration.QUALITATIVE_HAUL_VALID_NO); + VesselUseMeasurement vum = measurementPersistenceHelper.setVesselUseMeasurement(scientificCruise, vesselUseFeatures, PmfmId2.HAUL_VALID.getValue(), null, null, source.getFishingOperationValid() ? QualitativeValueId.HAUL_VALID_YES.getValue() : QualitativeValueId.HAUL_VALID_NO.getValue()); notChangedVesselUseMeasurements.remove(vum); } @@ -955,7 +960,7 @@ // Quality Flag : if (target.getQualityFlag() == null) { - target.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + target.setQualityFlag(load(QualityFlagImpl.class, QualityFlagCode.NOTQUALIFIED.getValue())); } // Settings not null properties : @@ -980,7 +985,7 @@ vesselUseFeatures.setCreationDate(d); } if (vesselUseFeatures.getQualityFlag() == null) { - vesselUseFeatures.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + vesselUseFeatures.setQualityFlag(load(QualityFlagImpl.class, QualityFlagCode.NOTQUALIFIED.getValue())); } // GearUseFeatures : @@ -996,7 +1001,7 @@ gearUseFeatures.setCreationDate(d); } if (gearUseFeatures.getQualityFlag() == null) { - gearUseFeatures.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + gearUseFeatures.setQualityFlag(load(QualityFlagImpl.class, QualityFlagCode.NOTQUALIFIED.getValue())); } // GearUseFeatures.Gear Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/IndividualObservationBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/IndividualObservationBatchPersistenceServiceImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/IndividualObservationBatchPersistenceServiceImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -27,14 +27,18 @@ import com.google.common.base.Preconditions; import com.google.common.collect.Lists; import fr.ifremer.adagio.core.dao.administration.programStrategy.Program; +import fr.ifremer.adagio.core.dao.administration.user.DepartmentId; import fr.ifremer.adagio.core.dao.administration.user.DepartmentImpl; +import fr.ifremer.adagio.core.dao.administration.user.PersonId; import fr.ifremer.adagio.core.dao.administration.user.PersonImpl; import fr.ifremer.adagio.core.dao.data.batch.Batch; import fr.ifremer.adagio.core.dao.data.batch.CatchBatch; import fr.ifremer.adagio.core.dao.data.operation.FishingOperationImpl; import fr.ifremer.adagio.core.dao.data.sample.Sample; +import fr.ifremer.adagio.core.dao.referential.QualityFlagCode; import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; import fr.ifremer.adagio.core.dao.referential.pmfm.Matrix; +import fr.ifremer.adagio.core.dao.referential.pmfm.MatrixId2; import fr.ifremer.adagio.core.dao.referential.pmfm.MatrixImpl; import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxonImpl; import fr.ifremer.adagio.core.dao.technical.synchronization.SynchronizationStatus; @@ -231,14 +235,14 @@ target.setLabel(label); // Matrix (product / batch) - Matrix matrix = load(MatrixImpl.class, enumeration.MATRIX_ID_PRODUCT_BATCH); + Matrix matrix = load(MatrixImpl.class, MatrixId2.PRODUCT_BATCH.getValue()); target.setMatrix(matrix); // IndividualCount target.setIndividualCount((short) 1); // Quality Flag - target.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + target.setQualityFlag(load(QualityFlagImpl.class, QualityFlagCode.NOTQUALIFIED.getValue())); // Sample Date if (target.getSampleDate() == null) { @@ -250,11 +254,11 @@ // Recorder Departement target.setRecorderDepartment(load(DepartmentImpl.class, - enumeration.DEPARTMENT_ID_UNKNOWN_RECORDER_DEPARTMENT)); + DepartmentId.UNKOWN_RECODER_DEPARTMENT.getValue())); // Recorder Person target.setRecorderPerson(load(PersonImpl.class, - enumeration.PERSON_ID_UNKNOWN_RECORDER_PERSON)); + PersonId.UNKNOWN_RECORDER_PERSON.getValue())); // Program Program program = fishingOperation.getFishingTrip().getProgram(); Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MarineLitterBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MarineLitterBatchPersistenceServiceImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MarineLitterBatchPersistenceServiceImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -31,6 +31,7 @@ import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; +import fr.ifremer.adagio.core.dao.referential.QualityFlagCode; import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValue; import fr.ifremer.tutti.persistence.entities.TuttiEntities; @@ -288,7 +289,7 @@ target.setIndividualCount(source.getNumber()); // QualityFlag - QualityFlagImpl qualityFlag = load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED); + QualityFlagImpl qualityFlag = load(QualityFlagImpl.class, QualityFlagCode.NOTQUALIFIED.getValue()); target.setQualityFlag(qualityFlag); // Comments Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ProgramPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ProgramPersistenceServiceImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ProgramPersistenceServiceImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -26,10 +26,15 @@ import com.google.common.base.Preconditions; import com.google.common.collect.Lists; +import fr.ifremer.adagio.core.dao.administration.programStrategy.ProgramCode; import fr.ifremer.adagio.core.dao.administration.programStrategy.ProgramDao; +import fr.ifremer.adagio.core.dao.referential.gear.GearClassificationId; import fr.ifremer.adagio.core.dao.referential.gear.GearClassificationImpl; import fr.ifremer.adagio.core.dao.referential.location.Location; +import fr.ifremer.adagio.core.dao.referential.location.LocationClassificationId; import fr.ifremer.adagio.core.dao.referential.location.LocationDao; +import fr.ifremer.adagio.core.dao.referential.location.LocationLevelId; +import fr.ifremer.adagio.core.dao.referential.taxon.TaxonGroupTypeCode; import fr.ifremer.adagio.core.dao.referential.taxon.TaxonGroupTypeImpl; import fr.ifremer.tutti.persistence.entities.data.Program; import fr.ifremer.tutti.persistence.entities.data.Programs; @@ -72,14 +77,14 @@ @Override public List<Program> getAllProgram() { String codePattern = "%"; - if (enumeration.PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX != null) { - codePattern = enumeration.PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX + codePattern; + if (ProgramCode.SCIENTIFIC_CRUISE_PREFIX.getValue() != null) { + codePattern = ProgramCode.SCIENTIFIC_CRUISE_PREFIX.getValue() + codePattern; } Iterator<Object[]> list = queryList( "allPrograms", "codePattern", StringType.INSTANCE, codePattern, - "locationLevelId", IntegerType.INSTANCE, enumeration.LOCATION_LEVEL_ID_PROGRAM, - "locationClassificationId", IntegerType.INSTANCE, enumeration.LOCATION_CLASSIFICATION_ID_SECTOR + "locationLevelId", IntegerType.INSTANCE, LocationLevelId.SCIENTIFIC_CRUISE_PROGRAM.getValue(), + "locationClassificationId", IntegerType.INSTANCE, LocationClassificationId.SECTOR.getValue() ); List<Program> result = Lists.newArrayList(); @@ -97,8 +102,8 @@ Iterator<Object[]> list = queryList( "program", "programCode", StringType.INSTANCE, id, - "locationLevelId", IntegerType.INSTANCE, enumeration.LOCATION_LEVEL_ID_PROGRAM, - "locationClassificationId", IntegerType.INSTANCE, enumeration.LOCATION_CLASSIFICATION_ID_SECTOR); + "locationLevelId", IntegerType.INSTANCE, LocationLevelId.SCIENTIFIC_CRUISE_PROGRAM.getValue(), + "locationClassificationId", IntegerType.INSTANCE, LocationClassificationId.SECTOR.getValue()); Program result; @@ -178,8 +183,8 @@ // Compute a program code (remove spaces, and capitalize the name) String programCode = source.getName().toUpperCase().replaceAll(" ", "_"); // Add a prefix - if (enumeration.PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX != null) { - programCode = enumeration.PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX + programCode; + if (ProgramCode.SCIENTIFIC_CRUISE_PREFIX.getValue() != null) { + programCode = ProgramCode.SCIENTIFIC_CRUISE_PREFIX.getValue() + programCode; } // Trunc the code if too long if (programCode.length() > maxCodeLengthInDatabase) { @@ -189,10 +194,10 @@ // Mandatory properties : // Gear classification : - target.setGearClassification(load(GearClassificationImpl.class, enumeration.GEAR_CLASSIFICIATION_ID_SCIENTIFIC)); + target.setGearClassification(load(GearClassificationImpl.class, GearClassificationId.SCIENTIFIC_CRUISE.getValue())); // taxon group type - target.setTaxonGroupType(load(TaxonGroupTypeImpl.class, enumeration.TAXON_GROUP_TYPE_ID_COMMERCIAL_SPECIES)); + target.setTaxonGroupType(load(TaxonGroupTypeImpl.class, TaxonGroupTypeCode.COMMERCIAL_SPECIES.getValue())); // Creation date target.setCreationDate(newCreateDate()); @@ -237,10 +242,10 @@ public int getProgramNameMaxLength() { int maxCodeLengthInDatabase = 40; - if (enumeration.PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX == null - || enumeration.PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX.trim().isEmpty()) { + if (ProgramCode.SCIENTIFIC_CRUISE_PREFIX.getValue() == null + || ProgramCode.SCIENTIFIC_CRUISE_PREFIX.getValue().trim().isEmpty()) { return maxCodeLengthInDatabase; } - return (maxCodeLengthInDatabase - enumeration.PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX.length()); + return (maxCodeLengthInDatabase - ProgramCode.SCIENTIFIC_CRUISE_PREFIX.getValue().length()); } } Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ProtocolPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ProtocolPersistenceServiceImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ProtocolPersistenceServiceImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -25,6 +25,7 @@ */ import com.google.common.collect.Lists; +import fr.ifremer.adagio.core.service.technical.CacheService; import fr.ifremer.tutti.persistence.entities.TuttiEntities; import fr.ifremer.tutti.persistence.entities.protocol.SpeciesProtocol; import fr.ifremer.tutti.persistence.entities.protocol.SpeciesProtocols; @@ -62,8 +63,8 @@ public static TuttiProtocol sharedProtocol; - @Resource(name = "technicalPersistenceService") - protected TechnicalPersistenceService technicalService; + @Resource(name = "cacheService") + protected CacheService cacheService; public TuttiProtocol getProtocol() { return sharedProtocol; @@ -76,10 +77,10 @@ sharedProtocol = protocol; try { - technicalService.clearCache("species"); - technicalService.clearCache("referentSpecies"); - technicalService.clearCache("referentSpeciesById"); - technicalService.clearCache("referentSpeciesByIdVernacula"); + cacheService.clearCache("species"); + cacheService.clearCache("referentSpecies"); + cacheService.clearCache("referentSpeciesById"); + cacheService.clearCache("referentSpeciesByIdVernacula"); } catch (Exception e) { //FIXME This @@ -137,7 +138,7 @@ @Override public TuttiProtocol getProtocol(String id) { File file = getProtocolFile(id); - TuttiProtocol result = TuttiProtocols.fromFile(enumeration, file); + TuttiProtocol result = TuttiProtocols.fromFile(file); return result; } Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -28,14 +28,27 @@ import com.google.common.base.Predicate; import com.google.common.collect.Iterables; import com.google.common.collect.Lists; +import com.google.common.collect.Sets; +import fr.ifremer.adagio.core.dao.administration.user.DepartmentId; import fr.ifremer.adagio.core.dao.administration.user.PersonExtendDao; +import fr.ifremer.adagio.core.dao.administration.user.UserProfilId; import fr.ifremer.adagio.core.dao.data.vessel.VesselExtendDao; +import fr.ifremer.adagio.core.dao.referential.StatusCode; import fr.ifremer.adagio.core.dao.referential.StatusDao; +import fr.ifremer.adagio.core.dao.referential.VesselTypeId; import fr.ifremer.adagio.core.dao.referential.gear.FishingGearExtendDao; import fr.ifremer.adagio.core.dao.referential.gear.GearClassification; +import fr.ifremer.adagio.core.dao.referential.gear.GearClassificationId; +import fr.ifremer.adagio.core.dao.referential.location.LocationClassificationId; import fr.ifremer.adagio.core.dao.referential.location.LocationExtendDao; +import fr.ifremer.adagio.core.dao.referential.location.LocationLabel; +import fr.ifremer.adagio.core.dao.referential.location.LocationLevelId; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueId; +import fr.ifremer.adagio.core.dao.referential.pmfm.UnitId; import fr.ifremer.adagio.core.dao.referential.taxon.TaxonNameExtendDao; import fr.ifremer.adagio.core.dao.referential.taxon.TaxonRefVO; +import fr.ifremer.adagio.core.dao.referential.transcribing.TranscribingItemTypeId; import fr.ifremer.adagio.core.service.technical.CacheService; import fr.ifremer.tutti.persistence.entities.TuttiEntities; import fr.ifremer.tutti.persistence.entities.data.SpeciesAbleBatch; @@ -76,6 +89,7 @@ import java.util.Date; import java.util.Iterator; import java.util.List; +import java.util.Set; /** * Implementation of the {@link ReferentialPersistenceService} using a adagio @@ -118,15 +132,39 @@ protected Predicate<SpeciesAbleBatch> batchVracPredicate; + protected Set<Integer> propertedPmfmIds; + @Override public void init() { super.init(); batchVracPredicate = TuttiEntities.newSpeciesAbleBatchCategoryPredicate( - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_VRAC_ID); + PmfmId2.SORTED_UNSORTED.getValue(), + QualitativeValueId.SORTED_VRAC.getValue()); + + // init protected pmfm ids + propertedPmfmIds = Sets.newHashSet( + PmfmId2.MULTIRIG_AGGREGATION.getValue(), + PmfmId2.MULTIRIG_NUMBER.getValue(), + PmfmId2.STATION_NUMBER.getValue(), + PmfmId2.RECTILINEAR_OPERATION.getValue(), + PmfmId2.HAUL_VALID.getValue(), + PmfmId2.TRAWL_DISTANCE.getValue(), + PmfmId2.SURVEY_PART.getValue(), + PmfmId2.SORTED_UNSORTED.getValue(), + PmfmId2.ID_PSFM.getValue() + ); } + /** + * @param pmfmId id of pmfm to test + * @return {@code true} if the pmfm should NOT be used for caracteristics lists + * (i.e. because used somewhere when storing some properties into the database) + */ + protected boolean isProtectedCaracteristic(Integer pmfmId) { + return propertedPmfmIds.contains(pmfmId); + } + //------------------------------------------------------------------------// //-- ReferentialPersistenceService implentation --// //------------------------------------------------------------------------// @@ -135,8 +173,8 @@ public List<TuttiLocation> getAllProgramZone() { Iterator<Object[]> list = queryListWithStatus( "allLocationsByLevelAndClassificiation", - "locationClassificationId", IntegerType.INSTANCE, enumeration.LOCATION_CLASSIFICATION_ID_SECTOR, - "locationLevelId", IntegerType.INSTANCE, enumeration.LOCATION_LEVEL_ID_PROGRAM); + "locationClassificationId", IntegerType.INSTANCE, LocationClassificationId.SECTOR.getValue(), + "locationLevelId", IntegerType.INSTANCE, LocationLevelId.SCIENTIFIC_CRUISE_PROGRAM.getValue()); List<TuttiLocation> result = Lists.newArrayList(); while (list.hasNext()) { @@ -151,8 +189,8 @@ public List<TuttiLocation> getAllCountry() { Iterator<Object[]> list = queryListWithStatus( "allLocationsByLevelAndClassificiation", - "locationClassificationId", IntegerType.INSTANCE, enumeration.LOCATION_CLASSIFICATION_ID_TERRITORIAL, - "locationLevelId", IntegerType.INSTANCE, enumeration.LOCATION_LEVEL_ID_COUNTRY); + "locationClassificationId", IntegerType.INSTANCE, LocationClassificationId.TERRITORIAL.getValue(), + "locationLevelId", IntegerType.INSTANCE, LocationLevelId.PAYS_ISO3.getValue()); List<TuttiLocation> result = Lists.newArrayList(); while (list.hasNext()) { @@ -167,8 +205,8 @@ public List<TuttiLocation> getAllHarbour() { Iterator<Object[]> list = queryListWithStatus( "allLocationsByLevelAndClassificiation", - "locationClassificationId", IntegerType.INSTANCE, enumeration.LOCATION_CLASSIFICATION_ID_TERRITORIAL, - "locationLevelId", IntegerType.INSTANCE, enumeration.LOCATION_LEVEL_ID_HARBOUR); + "locationClassificationId", IntegerType.INSTANCE, LocationClassificationId.TERRITORIAL.getValue(), + "locationLevelId", IntegerType.INSTANCE, LocationLevelId.PORT.getValue()); List<TuttiLocation> result = Lists.newArrayList(); while (list.hasNext()) { @@ -183,9 +221,9 @@ public List<TuttiLocation> getAllFishingOperationStrata(String zoneId) { Preconditions.checkNotNull(zoneId); List<TuttiLocation> result = getFishingOperationLocationsByParent( - enumeration.LOCATION_LEVEL_ID_STRATA, + LocationLevelId.SCIENTIFIC_CRUISE_STRATA.getValue(), Integer.valueOf(zoneId), - enumeration.LOCATION_LEVEL_ID_PROGRAM); + LocationLevelId.SCIENTIFIC_CRUISE_PROGRAM.getValue()); return Collections.unmodifiableList(result); } @@ -200,18 +238,18 @@ // use strata as parent parentId = strataId; - parentLocationLevelId = enumeration.LOCATION_LEVEL_ID_STRATA; + parentLocationLevelId = LocationLevelId.SCIENTIFIC_CRUISE_STRATA.getValue(); } else { // use zoneId as parent parentId = zoneId; - parentLocationLevelId = enumeration.LOCATION_LEVEL_ID_PROGRAM; + parentLocationLevelId = LocationLevelId.SCIENTIFIC_CRUISE_PROGRAM.getValue(); } Preconditions.checkNotNull(parentId); List<TuttiLocation> result = getFishingOperationLocationsByParent( - enumeration.LOCATION_LEVEL_ID_SUB_STRATA, + LocationLevelId.SCIENTIFIC_CRUISE_SUB_STRATA.getValue(), Integer.valueOf(parentId), parentLocationLevelId); return Collections.unmodifiableList(result); @@ -229,24 +267,24 @@ // use substrata as parent parentId = subStrataId; - parentLocationLevelId = enumeration.LOCATION_LEVEL_ID_SUB_STRATA; + parentLocationLevelId = LocationLevelId.SCIENTIFIC_CRUISE_SUB_STRATA.getValue(); } else if (strataId != null) { // use strata as parent parentId = strataId; - parentLocationLevelId = enumeration.LOCATION_LEVEL_ID_STRATA; + parentLocationLevelId = LocationLevelId.SCIENTIFIC_CRUISE_STRATA.getValue(); } else { // use zoneId as parent parentId = zoneId; - parentLocationLevelId = enumeration.LOCATION_LEVEL_ID_PROGRAM; + parentLocationLevelId = LocationLevelId.SCIENTIFIC_CRUISE_PROGRAM.getValue(); } Preconditions.checkNotNull(parentId); List<TuttiLocation> result = getFishingOperationLocationsByParent( - enumeration.LOCATION_LEVEL_ID_LOCALITE, + LocationLevelId.SCIENTIFIC_CRUISE_LOCALITE.getValue(), Integer.valueOf(parentId), parentLocationLevelId); return Collections.unmodifiableList(result); @@ -271,7 +309,7 @@ Iterator<Object[]> list = queryListWithStatus( "allVessels", "refDate", DateType.INSTANCE, new Date(), - "vesselTypeId", IntegerType.INSTANCE, enumeration.VESSEL_TYPE_ID_SCIENTIFIC); + "vesselTypeId", IntegerType.INSTANCE, VesselTypeId.SCIENTIFIC_RESEARCH_VESSEL.getValue()); List<Vessel> result = Lists.newArrayList(); Cache vesselByCodeCache = cacheService.getCache("vesselByCode"); @@ -291,7 +329,7 @@ Iterator<Object[]> list = queryListWithStatus( "allVessels", "refDate", DateType.INSTANCE, new Date(), - "vesselTypeId", IntegerType.INSTANCE, enumeration.VESSEL_TYPE_ID_FISHING + "vesselTypeId", IntegerType.INSTANCE, VesselTypeId.FISHING_VESSEL.getValue() ); List<Vessel> result = Lists.newArrayList(); @@ -334,7 +372,7 @@ Iterator<Object[]> sources = queryListWithStatus( "allGears", - "gearClassificiationId", IntegerType.INSTANCE, enumeration.GEAR_CLASSIFICIATION_ID_SCIENTIFIC); + "gearClassificiationId", IntegerType.INSTANCE, GearClassificationId.SCIENTIFIC_CRUISE.getValue()); List<Gear> result = Lists.newArrayList(); while (sources.hasNext()) { Object[] source = sources.next(); @@ -348,7 +386,7 @@ public List<Gear> getAllFishingGear() { Iterator<Object[]> sources = queryListWithStatus( "allGears", - "gearClassificiationId", IntegerType.INSTANCE, enumeration.GEAR_CLASSIFICIATION_ID_FISHING); + "gearClassificiationId", IntegerType.INSTANCE, GearClassificationId.FAO.getValue()); List<Gear> result = Lists.newArrayList(); while (sources.hasNext()) { Object[] source = sources.next(); @@ -362,10 +400,11 @@ public List<Person> getAllPerson() { Iterator<Object[]> list = queryListWithStatus( "allPersons", - "observerProfilId", IntegerType.INSTANCE, enumeration.USER_PROFIL_ID_OBSERVER, - "projectMemberProfilId", IntegerType.INSTANCE, enumeration.USER_PROFIL_ID_PROJECT_MEMBER, - "userProfilId", IntegerType.INSTANCE, enumeration.USER_PROFIL_ID_USER, - "departementPrefixCode", StringType.INSTANCE, enumeration.USER_PROFIL_ID_DEPARTEMENT_PREFIX + "observerProfilId", IntegerType.INSTANCE, UserProfilId.OBSERVER.getValue(), + "projectMemberProfilId", IntegerType.INSTANCE, UserProfilId.PROJECT_MEMBER.getValue(), + "userProfilId", IntegerType.INSTANCE, UserProfilId.USER.getValue(), + "departementPrefixCode", StringType.INSTANCE, "PDG-" //FIXME Use the Departement enum when it will exists in adagio +// "departementPrefixCode", StringType.INSTANCE, enumeration.USER_PROFIL_ID_DEPARTEMENT_PREFIX ); List<Person> result = Lists.newArrayList(); @@ -401,7 +440,7 @@ public List<Species> getAllSpecies() { TaxonRefVO[] sources = taxonNameDao.getAllTaxonNames( - true, enumeration.TRANSCRIBING_TYPE_ID_REFTAX); + true, TranscribingItemTypeId.TAXON_NAME_REFTAX_CODE.getValue()); List<Species> result = Lists.newArrayListWithCapacity(sources.length); List<Species> referenceTaxonsOnly = Lists.newArrayList(); @@ -433,7 +472,7 @@ public List<Species> getAllReferentSpecies() { TaxonRefVO[] sources = taxonNameDao.getAllTaxonNames( - false, enumeration.TRANSCRIBING_TYPE_ID_REFTAX); + false, TranscribingItemTypeId.TAXON_NAME_REFTAX_CODE.getValue()); List<Species> result = Lists.newArrayListWithCapacity(sources.length); Cache referentSpeciesByIdCache = cacheService.getCache("referentSpeciesById"); for (TaxonRefVO source : sources) { @@ -454,7 +493,7 @@ public Species getSpeciesByReferenceTaxonId(Integer referenceTaxonId) { Species result = getSpeciesByReferenceTaxonId( referenceTaxonId, - enumeration.TRANSCRIBING_TYPE_ID_REFTAX); + TranscribingItemTypeId.TAXON_NAME_REFTAX_CODE.getValue()); if (result != null) { result.setRefTaxCode(result.getExternalCode()); } @@ -465,7 +504,7 @@ public Species getSpeciesByReferenceTaxonIdWithVernacularCode(Integer referenceTaxonId) { Species result = getSpeciesByReferenceTaxonId( referenceTaxonId, - enumeration.TRANSCRIBING_TYPE_ID_VERNACULAIRE); + TranscribingItemTypeId.TAXON_NAME_LOCAL_NAME.getValue()); if (result != null) { result.setVernacularCode(result.getExternalCode()); } @@ -506,7 +545,7 @@ protected List<Caracteristic> getAllCaracteristics(boolean withProtected) { Iterator<Object[]> sources = queryListWithStatus( "allPmfm", - "unitIdNone", IntegerType.INSTANCE, enumeration.UNIT_ID_NONE); + "unitIdNone", IntegerType.INSTANCE, UnitId.NONE.getValue()); List<Caracteristic> result = Lists.newArrayList(); Cache pmfmByIdCache = cacheService.getCache("pmfmById"); while (sources.hasNext()) { @@ -514,7 +553,7 @@ Integer pmfmId = (Integer) source[0]; Caracteristic target = loadCaracteristic(source); // Skip some protected PSFM - if (withProtected || !enumeration.isProtectedCaracteristic(pmfmId)) { + if (withProtected || !isProtectedCaracteristic(pmfmId)) { result.add(target); } pmfmByIdCache.put(pmfmId, target); @@ -559,21 +598,21 @@ @Override public Caracteristic getSizeCategoryCaracteristic() { - Integer pmfmId = enumeration.PMFM_ID_SIZE_CATEGORY; + Integer pmfmId = PmfmId2.SIZE_CATEGORY.getValue(); Caracteristic result = getCaracteristic(pmfmId); return result; } @Override public Caracteristic getSexCaracteristic() { - Integer pmfmId = enumeration.PMFM_ID_SEX; + Integer pmfmId = PmfmId2.SEX.getValue(); Caracteristic result = getCaracteristic(pmfmId); return result; } @Override public Caracteristic getSortedUnsortedCaracteristic() { - Integer pmfmId = enumeration.PMFM_ID_SORTED_UNSORTED; + Integer pmfmId = PmfmId2.SORTED_UNSORTED.getValue(); Caracteristic result = thisService.getCaracteristic(pmfmId); // Search the qualitative value to skip @@ -583,7 +622,7 @@ Iterator<CaracteristicQualitativeValue> iterator = qualitativeValue.iterator(); while (iterator.hasNext()) { CaracteristicQualitativeValue qv = iterator.next(); - if (enumeration.QUALITATIVE_UNSORTED_ID.equals(Integer.valueOf(qv.getId()))) { + if (QualitativeValueId.UNSORTED.getValue().equals(Integer.valueOf(qv.getId()))) { iterator.remove(); break; } @@ -594,70 +633,70 @@ @Override public Caracteristic getMaturityCaracteristic() { - Integer pmfmId = enumeration.PMFM_ID_MATURITY; + Integer pmfmId = PmfmId2.MATURITY.getValue(); Caracteristic result = thisService.getCaracteristic(pmfmId); return result; } @Override public Caracteristic getAgeCaracteristic() { - Integer pmfmId = enumeration.PMFM_ID_AGE; + Integer pmfmId = PmfmId2.AGE.getValue(); Caracteristic result = thisService.getCaracteristic(pmfmId); return result; } @Override public Caracteristic getMarineLitterCategoryCaracteristic() { - Integer pmfmId = enumeration.PMFM_ID_MARINE_LITTER_TYPE; + Integer pmfmId = PmfmId2.MARINE_LITTER_TYPE.getValue(); Caracteristic result = thisService.getCaracteristic(pmfmId); return result; } @Override public Caracteristic getMarineLitterSizeCategoryCaracteristic() { - Integer pmfmId = enumeration.PMFM_ID_MARINE_LITTER_SIZE_CATEGORY; + Integer pmfmId = PmfmId2.MARINE_LITTER_SIZE_CATEGORY.getValue(); Caracteristic result = thisService.getCaracteristic(pmfmId); return result; } @Override public Caracteristic getVerticalOpeningCaracteristic() { - Integer pmfmId = enumeration.PMFM_ID_VERTICAL_OPENING; + Integer pmfmId = PmfmId2.VERTICAL_OPENING.getValue(); Caracteristic result = thisService.getCaracteristic(pmfmId); return result; } @Override public Caracteristic getHorizontalOpeningWingsCaracteristic() { - Integer pmfmId = enumeration.PMFM_ID_HORIZONTAL_OPENING_WINGS; + Integer pmfmId = PmfmId2.HORIZONTAL_OPENING_WINGS.getValue(); Caracteristic result = thisService.getCaracteristic(pmfmId); return result; } @Override public Caracteristic getHorizontalOpeningDoorCaracteristic() { - Integer pmfmId = enumeration.PMFM_ID_HORIZONTAL_OPENING_DOOR; + Integer pmfmId = PmfmId2.HORIZONTAL_OPENING_DOOR.getValue(); Caracteristic result = thisService.getCaracteristic(pmfmId); return result; } @Override public Caracteristic getDeadOrAliveCaracteristic() { - Integer pmfmId = enumeration.PMFM_ID_DEAD_OR_ALIVE; + Integer pmfmId = PmfmId2.DEAD_OR_ALIVE.getValue(); Caracteristic result = thisService.getCaracteristic(pmfmId); return result; } @Override public Caracteristic getPmfmIdCaracteristic() { - Integer pmfmId = enumeration.PMFM_ID_ID_PSFM; + Integer pmfmId = PmfmId2.ID_PSFM.getValue(); Caracteristic result = thisService.getCaracteristic(pmfmId); return result; } @Override public Caracteristic getWeightMeasuredCaracteristic() { - Integer pmfmId = enumeration.PMFM_ID_WEIGHT_MEASURED; + Integer pmfmId = PmfmId2.WEIGHT_MEASURED.getValue(); Caracteristic result = thisService.getCaracteristic(pmfmId); return result; } @@ -666,7 +705,7 @@ public boolean isTemporary(TuttiReferentialEntity entity) { Preconditions.checkNotNull(entity); Preconditions.checkNotNull(entity.getStatus()); - return enumeration.STATUS_TEMPORARY_CODE.equals( + return StatusCode.TEMPORARY.getValue().equals( entity.getStatus().getId()); } @@ -674,7 +713,7 @@ public Caracteristic getCaracteristic(Integer pmfmId) { Object[] source = queryUniqueWithStatus("pmfmById", "pmfmId", IntegerType.INSTANCE, pmfmId, - "unitIdNone", IntegerType.INSTANCE, enumeration.UNIT_ID_NONE); + "unitIdNone", IntegerType.INSTANCE, UnitId.NONE.getValue()); Caracteristic target = loadCaracteristic(source); return target; } @@ -704,13 +743,13 @@ List<Vessel> result = Lists.newArrayList(); fr.ifremer.adagio.core.dao.referential.Status status = - statusDao.load(enumeration.STATUS_TEMPORARY_CODE); + statusDao.load(StatusCode.TEMPORARY.getValue()); Integer countryLocationId = locationDao.getLocationIdByLabelAndLocationLevel( - enumeration.LOCATION_LABEL_DEFAULT_COUNTRY, - new Integer[]{enumeration.LOCATION_LEVEL_ID_COUNTRY}); + LocationLabel.FRANCE.getValue(), + new Integer[]{LocationLevelId.PAYS_ISO3.getValue()}); if (countryLocationId == null) { - throw new DataIntegrityViolationException("Default country location not found, with label=" + enumeration.LOCATION_LABEL_DEFAULT_COUNTRY); + throw new DataIntegrityViolationException("Default country location not found, with label=" + LocationLabel.FRANCE.getValue()); } for (Vessel source : vessels) { @@ -725,7 +764,7 @@ List<Person> result = Lists.newArrayList(); fr.ifremer.adagio.core.dao.referential.Status status = - statusDao.load(enumeration.STATUS_TEMPORARY_CODE); + statusDao.load(StatusCode.TEMPORARY.getValue()); for (Person source : persons) { source = importTemporaryPerson(source, status); result.add(source); @@ -738,7 +777,7 @@ List<Gear> result = Lists.newArrayList(); fr.ifremer.adagio.core.dao.referential.Status status = - statusDao.load(enumeration.STATUS_TEMPORARY_CODE); + statusDao.load(StatusCode.TEMPORARY.getValue()); for (Gear source : gears) { source = importTemporaryGear(source, status); result.add(source); @@ -762,9 +801,9 @@ Integer vesselTypeId; if (source.isScientificVessel()) { - vesselTypeId = enumeration.VESSEL_TYPE_ID_SCIENTIFIC; + vesselTypeId = VesselTypeId.SCIENTIFIC_RESEARCH_VESSEL.getValue(); } else { - vesselTypeId = enumeration.VESSEL_TYPE_ID_FISHING; + vesselTypeId = VesselTypeId.FISHING_VESSEL.getValue(); } fr.ifremer.adagio.core.dao.data.vessel.Vessel target = @@ -791,7 +830,7 @@ Preconditions.checkNotNull(source.getFirstName()); Preconditions.checkNotNull(source.getLastName()); - fr.ifremer.adagio.core.dao.administration.user.Person target = personDao.createAsTemporary(source.getLastName(), source.getFirstName(), enumeration.DEPARTMENT_ID_UNKNOWN_RECORDER_DEPARTMENT); + fr.ifremer.adagio.core.dao.administration.user.Person target = personDao.createAsTemporary(source.getLastName(), source.getFirstName(), DepartmentId.UNKOWN_RECODER_DEPARTMENT.getValue()); // Fill the result bean Person result = Persons.newPerson(); @@ -830,9 +869,9 @@ Integer gearClassificationId; if (source.isScientificGear()) { - gearClassificationId = enumeration.GEAR_CLASSIFICIATION_ID_SCIENTIFIC; + gearClassificationId = GearClassificationId.SCIENTIFIC_CRUISE.getValue(); } else { - gearClassificationId = enumeration.GEAR_CLASSIFICIATION_ID_FISHING; + gearClassificationId = GearClassificationId.FAO.getValue(); } fr.ifremer.adagio.core.dao.referential.gear.Gear target = fishingGearDao.createAsTemporary(source.getLabel(), source.getName(), gearClassificationId); @@ -852,7 +891,7 @@ "allFishingOperationLocationByParent", "parentId", IntegerType.INSTANCE, parentId, "parentLocationLevelId", IntegerType.INSTANCE, parentLocationLevelId, - "locationClassificationId", IntegerType.INSTANCE, enumeration.LOCATION_CLASSIFICATION_ID_SECTOR, + "locationClassificationId", IntegerType.INSTANCE, LocationClassificationId.SECTOR.getValue(), "locationLevelId", IntegerType.INSTANCE, locationLevelId ); List<TuttiLocation> result = Lists.newArrayList(); @@ -957,7 +996,7 @@ GearClassification classification = (GearClassification) source[3]; boolean scientific = false; if (classification != null) { - scientific = classification.getId().equals(enumeration.GEAR_CLASSIFICIATION_ID_SCIENTIFIC); + scientific = classification.getId().equals(GearClassificationId.SCIENTIFIC_CRUISE.getValue()); } result.setScientificGear(scientific); @@ -977,8 +1016,8 @@ protected Iterator<Object[]> queryListWithStatus(String queryName, Object... params) { Query query = createQuery(queryName, params); - query.setString("statusValidCode", enumeration.STATUS_VALID_CODE); - query.setString("statusTemporaryCode", enumeration.STATUS_TEMPORARY_CODE); + query.setString("statusValidCode", StatusCode.ENABLE.getValue()); + query.setString("statusTemporaryCode", StatusCode.TEMPORARY.getValue()); Iterator<Object[]> result = query.iterate(); return result; @@ -987,8 +1026,8 @@ protected Object[] queryUniqueWithStatus(String queryName, Object... params) { Query query = createQuery(queryName, params); - query.setString("statusValidCode", enumeration.STATUS_VALID_CODE); - query.setString("statusTemporaryCode", enumeration.STATUS_TEMPORARY_CODE); + query.setString("statusValidCode", StatusCode.ENABLE.getValue()); + query.setString("statusTemporaryCode", StatusCode.TEMPORARY.getValue()); Object result = query.uniqueResult(); return (Object[]) result; Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -35,7 +35,9 @@ import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; import fr.ifremer.adagio.core.dao.referential.QualityFlag; +import fr.ifremer.adagio.core.dao.referential.QualityFlagCode; import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxon; import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxonImpl; import fr.ifremer.tutti.persistence.InvalidBatchModelException; @@ -452,7 +454,7 @@ } QualityFlag qualityFlag = source.getQualityFlag(); - target.setSpeciesToConfirm(qualityFlag != null && enumeration.QUALITY_FLAG_CODE_DOUBTFUL.equals(qualityFlag.getCode())); + target.setSpeciesToConfirm(qualityFlag != null && QualityFlagCode.DOUBTFUL.getValue().equals(qualityFlag.getCode())); return target; } @@ -556,7 +558,7 @@ if (source.getSampleCategoryId() != null && source.getSampleCategoryValue() != null) { Integer pmfmId = source.getSampleCategoryId(); // Do not store sorting measurement if pmfm = SORTED (already store in an ancestor batch) - if (!pmfmId.equals(enumeration.PMFM_ID_SORTED_UNSORTED)) { + if (!pmfmId.equals(PmfmId2.SORTED_UNSORTED.getValue())) { SortingMeasurement sortingMeasurement = measurementPersistenceHelper.setSortingMeasurement( target, pmfmId, @@ -580,9 +582,9 @@ // QualityFlag String qualityFlag; if (source.isSpeciesToConfirm()) { - qualityFlag = enumeration.QUALITY_FLAG_CODE_DOUBTFUL; + qualityFlag = QualityFlagCode.DOUBTFUL.getValue(); } else { - qualityFlag = enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED; + qualityFlag = QualityFlagCode.NOTQUALIFIED.getValue(); } target.setQualityFlag(load(QualityFlagImpl.class, qualityFlag)); Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TechnicalPersistenceService.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TechnicalPersistenceService.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TechnicalPersistenceService.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -18,20 +18,12 @@ public interface TechnicalPersistenceService extends TuttiPersistenceServiceImplementor { /** - * @return the enumeration file (where all constant mapping are defined). - * @since 2.4 - */ - TuttiEnumerationFile getEnumerationFile(); - - /** * To clear all caches. * * @since 1.0.1 */ void clearAllCaches(); - void clearCache(String cacheName); - /** * To invoke the given call code. * Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TechnicalPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TechnicalPersistenceServiceImpl.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TechnicalPersistenceServiceImpl.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -5,14 +5,11 @@ import fr.ifremer.adagio.core.dao.technical.VersionNotFoundException; import fr.ifremer.adagio.core.service.technical.CacheService; import fr.ifremer.adagio.core.service.technical.sanity.DatabaseSanityService; -import net.sf.ehcache.Ehcache; -import net.sf.ehcache.Status; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.nuiton.jaxx.application.ApplicationTechnicalException; import org.nuiton.util.Version; import org.nuiton.util.VersionUtil; -import org.springframework.cache.Cache; import org.springframework.stereotype.Service; import javax.annotation.Resource; @@ -40,11 +37,6 @@ protected DatabaseSchemaDao databaseSchemaDao; @Override - public TuttiEnumerationFile getEnumerationFile() { - return enumeration; - } - - @Override public <V> V invoke(Callable<V> call) { try { @@ -101,14 +93,4 @@ cacheService.clearAllCaches(); } - @Override - public void clearCache(String cacheName) { - Cache cache = cacheService.getCache(cacheName); - if (cache != null) { - Ehcache nativeCache = (Ehcache) cache.getNativeCache(); - if (Status.STATUS_ALIVE.equals(nativeCache.getStatus())) { - cacheService.clearCache(cacheName); - } - } - } } Deleted: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFile.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFile.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFile.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -1,373 +0,0 @@ -package fr.ifremer.tutti.persistence.service; - -/* - * #%L - * Tutti :: Persistence API - * $Id$ - * $HeadURL$ - * %% - * Copyright (C) 2012 - 2013 Ifremer - * %% - * This program is free software: you can redistribute it and/or modify - * it under the terms of the GNU General Public License as - * published by the Free Software Foundation, either version 3 of the - * License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public - * License along with this program. If not, see - * <http://www.gnu.org/licenses/gpl-3.0.html>. - * #L% - */ - -import com.google.common.base.Preconditions; -import com.google.common.collect.Maps; -import com.google.common.collect.Sets; -import fr.ifremer.tutti.persistence.entities.TuttiEnumerable; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; -import org.springframework.beans.factory.annotation.Value; -import org.springframework.util.ReflectionUtils; - -import java.lang.reflect.Field; -import java.util.Map; -import java.util.Set; - -/** - * Contains all constants usable via the enumeration file. - * - * @author tchemit <chemit(a)codelutin.com> - * @since 0.3 - */ -public class TuttiEnumerationFile { - - @Value("${adagio.enumeration.GearClassificationId.SCIENTIFIC_CRUISE}") - public final Integer GEAR_CLASSIFICIATION_ID_SCIENTIFIC = null; - - @Value("${adagio.enumeration.GearClassificationId.FAO}") - public final Integer GEAR_CLASSIFICIATION_ID_FISHING = null; - - @Value("${adagio.enumeration.LocationClassificationId.TERRITORIAL}") - public final Integer LOCATION_CLASSIFICATION_ID_TERRITORIAL = null; - - @Value("${adagio.enumeration.LocationClassificationId.SECTOR}") - public final Integer LOCATION_CLASSIFICATION_ID_SECTOR = null; - - @Value("${adagio.enumeration.LocationLabel.FRANCE}") - public final String LOCATION_LABEL_DEFAULT_COUNTRY = null; - - @Value("${adagio.enumeration.LocationLevelId.PAYS_ISO3}") - public final Integer LOCATION_LEVEL_ID_COUNTRY = null; - - @Value("${adagio.enumeration.LocationLevelId.PORT}") - public final Integer LOCATION_LEVEL_ID_HARBOUR = null; - - @Value("${adagio.enumeration.LocationLevelId.SCIENTIFIC_CRUISE_LOCALITE}") - public final Integer LOCATION_LEVEL_ID_LOCALITE = null; - - @Value("${adagio.enumeration.LocationLevelId.SCIENTIFIC_CRUISE_PROGRAM}") - public final Integer LOCATION_LEVEL_ID_PROGRAM = null; - - @Value("${adagio.enumeration.LocationLevelId.SCIENTIFIC_CRUISE_STRATA}") - public final Integer LOCATION_LEVEL_ID_STRATA = null; - - @Value("${adagio.enumeration.LocationLevelId.SCIENTIFIC_CRUISE_SUB_STRATA}") - public final Integer LOCATION_LEVEL_ID_SUB_STRATA = null; - - @Value("${adagio.enumeration.ParameterCode.AGE}") - public final String PARAMETER_CODE_AGE = null; - - @Value("${adagio.enumeration.ParameterCode.WEIGHT}") - public final String PARAMETER_CODE_WEIGHT = null; - - @Value("${adagio.enumeration.PmfmId.SIZE_CATEGORY}") - public final Integer PMFM_ID_SIZE_CATEGORY = null; - - @Value("${adagio.enumeration.PmfmId.SEX}") - public final Integer PMFM_ID_SEX = null; - - @Value("${adagio.enumeration.PmfmId.SORTED_UNSORTED}") - public final Integer PMFM_ID_SORTED_UNSORTED = null; - - @Value("${adagio.enumeration.PmfmId.MATURITY}") - public final Integer PMFM_ID_MATURITY = null; - - @Value("${adagio.enumeration.PmfmId.MARINE_LITTER_TYPE}") - public final Integer PMFM_ID_MARINE_LITTER_TYPE = null; - - @Value("${adagio.enumeration.PmfmId.MARINE_LITTER_SIZE_CATEGORY}") - public final Integer PMFM_ID_MARINE_LITTER_SIZE_CATEGORY = null; - - @Value("${adagio.enumeration.PmfmId.SCIENTIFIC_CRUISE_SORTING_TYPE}") - public final Integer PMFM_ID_SORTING_TYPE = null; - - @Value("${adagio.enumeration.PmfmId.SCIENTIFIC_CRUISE_SORTING_TYPE_2}") - public final Integer PMFM_ID_SORTING_TYPE_2 = null; - - @Value("${adagio.enumeration.UnitId.NONE}") - public final Integer UNIT_ID_NONE = null; - - @Value("${adagio.enumeration.UserProfilId.OBSERVER}") - public final Integer USER_PROFIL_ID_OBSERVER = null; - - @Value("${adagio.enumeration.UserProfilId.PROJECT_MEMBER}") - public final Integer USER_PROFIL_ID_PROJECT_MEMBER = null; - - @Value("${adagio.enumeration.UserProfilId.USER}") - public final Integer USER_PROFIL_ID_USER = null; - - @Value("${adagio.enumeration.UserProfilId.DEPARTEMENT_PREFIX}") - public final String USER_PROFIL_ID_DEPARTEMENT_PREFIX = null; - - @Value("${adagio.enumeration.VesselTypeId.SCIENTIFIC_RESEARCH_VESSEL}") - public final Integer VESSEL_TYPE_ID_SCIENTIFIC = null; - - @Value("${adagio.enumeration.VesselTypeId.FISHING_VESSEL}") - public final Integer VESSEL_TYPE_ID_FISHING = null; - -// @Value("${adagio.enumeration.LocationLevelId.RECTANGLE_STATISTIQUE_MED}") -// public final Integer RECTANGLE_STATISTIQUE_MED = null; - - @Value("${adagio.enumeration.LocationLevelId.RECTANGLE_STATISTIQUE}") - public final Integer RECTANGLE_STATISTIQUE = null; - - @Value("${adagio.enumeration.QualitativeValueId.SORTED_VRAC}") - public final Integer QUALITATIVE_VRAC_ID = null; - - @Value("${adagio.enumeration.QualitativeValueId.SORTED_HORS_VRAC}") - public final Integer QUALITATIVE_HORS_VRAC_ID = null; - - @Value("${adagio.enumeration.QualitativeValueId.UNSORTED}") - public final Integer QUALITATIVE_UNSORTED_ID = null; - - @Value("${adagio.enumeration.QualitativeValueId.SEX_MALE}") - public final Integer QUALITATIVE_SEX_MALE_ID = null; - - @Value("${adagio.enumeration.QualitativeValueId.SEX_FEMALE}") - public final Integer QUALITATIVE_SEX_FEMALE_ID = null; - - @Value("${adagio.enumeration.QualitativeValueId.SEX_UNDEFINED}") - public final Integer QUALITATIVE_SEX_UNDEFINED_ID = null; - - @Value("${adagio.enumeration.QualitativeValueId.MATURITY_1}") - public final Integer QUALITATIVE_MATURITY_1_ID = null; - - @Value("${adagio.enumeration.QualitativeValueId.MATURITY_2}") - public final Integer QUALITATIVE_MATURITY_2_ID = null; - - @Value("${adagio.enumeration.QualitativeValueId.MATURITY_3}") - public final Integer QUALITATIVE_MATURITY_3_ID = null; - - @Value("${adagio.enumeration.QualitativeValueId.MATURITY_4}") - public final Integer QUALITATIVE_MATURITY_4_ID = null; - - @Value("${adagio.enumeration.QualitativeValueId.MATURITY_5}") - public final Integer QUALITATIVE_MATURITY_5_ID = null; - - @Value("${adagio.enumeration.QualitativeValueId.SIZE_SMALL}") - public final Integer QUALITATIVE_SIZE_SMALL_ID = null; - - @Value("${adagio.enumeration.QualitativeValueId.SIZE_MEDIUM}") - public final Integer QUALITATIVE_SIZE_MEDIUM_ID = null; - - @Value("${adagio.enumeration.QualitativeValueId.SIZE_BIG}") - public final Integer QUALITATIVE_SIZE_BIG_ID = null; - - @Value("${adagio.enumeration.QualitativeValueId.SORTING_TYPE_SPECIES}") - public final Integer QUALITATIVE_ID_SORTING_TYPE_SPECIES = null; - - @Value("${adagio.enumeration.QualitativeValueId.SORTING_TYPE_BENTHOS}") - public final Integer QUALITATIVE_ID_SORTING_TYPE_BENTHOS = null; - - @Value("${adagio.enumeration.QualitativeValueId.SORTING_TYPE_MARINE_LITTER}") - public final Integer QUALITATIVE_ID_SORTING_TYPE_MARINE_LITTER = null; - - @Value("${adagio.enumeration.QualitativeValueId.SORTING_TYPE_2_ALIVE_NOT_ITEMIZED}") - public final Integer QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED = null; - - @Value("${adagio.enumeration.QualitativeValueId.SORTING_TYPE_2_INERT}") - public final Integer QUALITATIVE_ID_SORTING_TYPE_2_INERT = null; - - @Value("${adagio.enumeration.QualitativeValueId.SORTING_TYPE_2_ALIVE_ITEMIZED}") - public final Integer QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED = null; - - @Value("${adagio.enumeration.StatusCode.ENABLE}") - public final String STATUS_VALID_CODE = null; - - @Value("${adagio.enumeration.StatusCode.TEMPORARY}") - public final String STATUS_TEMPORARY_CODE = null; - - @Value("${adagio.enumeration.PersonId.UNKNOWN_RECORDER_PERSON}") - public final Integer PERSON_ID_UNKNOWN_RECORDER_PERSON = null; - - @Value("${adagio.enumeration.QualityFlagCode.NOTQUALIFIED}") - public final String QUALITY_FLAG_CODE_NOT_QUALIFIED = null; - - @Value("${adagio.enumeration.QualityFlagCode.DOUBTFUL}") - public final String QUALITY_FLAG_CODE_DOUBTFUL = null; - - @Value("${adagio.enumeration.PmfmId.STATION_NUMBER}") - public final Integer PMFM_ID_STATION_NUMBER = null; - - @Value("${adagio.enumeration.PmfmId.TRAWL_DISTANCE}") - public final Integer PMFM_ID_TRAWL_DISTANCE = null; - - @Value("${adagio.enumeration.PmfmId.RECTILINEAR_OPERATION}") - public final Integer PMFM_ID_RECTILINEAR_OPERATION = null; - - @Value("${adagio.enumeration.QualitativeValueId.RECTILINEAR_OPERATION_YES}") - public final Integer QUALITATIVE_RECTILINEAR_OPERATION_YES = null; - - @Value("${adagio.enumeration.QualitativeValueId.RECTILINEAR_OPERATION_NO}") - public final Integer QUALITATIVE_RECTILINEAR_OPERATION_NO = null; - - @Value("${adagio.enumeration.PmfmId.HAUL_VALID}") - public final Integer PMFM_ID_HAUL_VALID = null; - - @Value("${adagio.enumeration.QualitativeValueId.HAUL_VALID_YES}") - public final Integer QUALITATIVE_HAUL_VALID_YES = null; - - @Value("${adagio.enumeration.QualitativeValueId.HAUL_VALID_NO}") - public final Integer QUALITATIVE_HAUL_VALID_NO = null; - - @Value("${adagio.enumeration.PmfmId.MULTIRIG_NUMBER}") - public final Integer PMFM_ID_MULTIRIG_NUMBER = null; - - @Value("${adagio.enumeration.PmfmId.MULTIRIG_AGGREGATION}") - public final Integer PMFM_ID_MULTIRIG_AGGREGATION = null; - - @Value("${adagio.enumeration.PmfmId.WEIGHT_MEASURED}") - public final Integer PMFM_ID_WEIGHT_MEASURED = null; - - @Value("${adagio.enumeration.DepartmentId.UNKNOWN_RECORDER_DEPARTMENT}") - public final Integer DEPARTMENT_ID_UNKNOWN_RECORDER_DEPARTMENT = null; - - @Value("${adagio.enumeration.PmfmId.AGE}") - public final Integer PMFM_ID_AGE = null; - - @Value("${adagio.enumeration.PmfmId.SURVEY_PART}") - public final Integer PMFM_ID_SURVEY_PART = null; - - @Value("${adagio.enumeration.PmfmId.VERTICAL_OPENING}") - public final Integer PMFM_ID_VERTICAL_OPENING = null; - - @Value("${adagio.enumeration.PmfmId.HORIZONTAL_OPENING_WINGS}") - public final Integer PMFM_ID_HORIZONTAL_OPENING_WINGS = null; - - @Value("${adagio.enumeration.PmfmId.HORIZONTAL_OPENING_DOOR}") - public final Integer PMFM_ID_HORIZONTAL_OPENING_DOOR = null; - - @Value("${adagio.enumeration.PmfmId.DEAD_OR_ALIVE}") - public final Integer PMFM_ID_DEAD_OR_ALIVE = null; - - @Value("${adagio.enumeration.ProgramCode.SCIENTIFIC_CRUISE_PREFIX}") - public final String PROGRAM_CODE_SCIENTIFIC_CRUISE_PREFIX = null; - - @Value("${adagio.enumeration.TaxonGroupTypeCode.COMMERCIAL_SPECIES}") - public final String TAXON_GROUP_TYPE_ID_COMMERCIAL_SPECIES = null; - - @Value("${adagio.enumeration.ObjectTypeCode.SCIENTIFIC_CRUISE}") - public final String OBJECT_TYPE_SCIENTIFIC_CRUISE = null; - - @Value("${adagio.enumeration.ObjectTypeCode.CATCH_BATCH}") - public final String OBJECT_TYPE_CATCH_BATCH = null; - - @Value("${adagio.enumeration.ObjectTypeCode.BATCH}") - public final String OBJECT_TYPE_BATCH = null; - - @Value("${adagio.enumeration.ObjectTypeCode.OPERATION}") - public final String OBJECT_TYPE_OPERATION = null; - - @Value("${adagio.enumeration.ObjectTypeCode.SAMPLE}") - public final String OBJECT_TYPE_SAMPLE = null; - - @Value("${adagio.enumeration.VesselPersonRoleId.SCIENTIFIC_CRUISE_MANAGER}") - public final Integer VESSEL_PERSON_ROLE_ID_SCIENTIFIC_CRUISE_MANAGER = null; - - @Value("${adagio.enumeration.VesselPersonRoleId.SORT_ROOM_MANAGER}") - public final Integer VESSEL_PERSON_ROLE_ID_SORT_ROOM_MANAGER = null; - - @Value("${adagio.enumeration.VesselPersonRoleId.RECORDER_PERSON}") - public final Integer VESSEL_PERSON_ROLE_ID_RECORDER_PERSON = null; - - @Value("${adagio.enumeration.TranscribingTypeId.TAXINOMIE_REFTAX_MNEMONIQUE}") - public final Integer TRANSCRIBING_TYPE_ID_REFTAX = null; - - @Value("${adagio.enumeration.TranscribingTypeId.TAXINOMIE_COMMUN_NOM_VERNACULAIRE}") - public final Integer TRANSCRIBING_TYPE_ID_VERNACULAIRE = null; - - @Value("${adagio.enumeration.MatrixId.PRODUCT_BATCH}") - public final Integer MATRIX_ID_PRODUCT_BATCH = null; - - @Value("${adagio.enumeration.PmfmId.ID_PSFM}") - public final Integer PMFM_ID_ID_PSFM = null; - - protected Set<Integer> propertedPmfmIds; - - public void init() { - - Map<String, Object> annotatedFieldValues = Maps.newTreeMap(); - - Field[] declaredFields = getClass().getDeclaredFields(); - for (Field declaredField : declaredFields) { - Value annotation = declaredField.getAnnotation(Value.class); - if (annotation != null) { - - // check on that field that his value is here - Object fieldValue = ReflectionUtils.getField(declaredField, this); - String fieldName = declaredField.getName(); - Preconditions.checkNotNull( - fieldValue, - annotation.value() + " constant not found (field " + - fieldName + ")"); - annotatedFieldValues.put(fieldName, fieldValue); - } - } - - // init enums - initEnum(AttachementObjectTypeEnum.class, annotatedFieldValues); - - //FIXME Should also add the one from sample category model ? - // init protected pmfm ids - propertedPmfmIds = Sets.newHashSet( - PMFM_ID_MULTIRIG_AGGREGATION, - PMFM_ID_MULTIRIG_NUMBER, - PMFM_ID_STATION_NUMBER, - PMFM_ID_RECTILINEAR_OPERATION, - PMFM_ID_HAUL_VALID, - PMFM_ID_TRAWL_DISTANCE, - PMFM_ID_SURVEY_PART, - PMFM_ID_SORTED_UNSORTED, - PMFM_ID_ID_PSFM - ); - } - - /** - * @param pmfmId id of pmfm to test - * @return {@code true} if the pmfm should NOT be used for caracteristics lists - * (i.e. because used somewhere when storing some properties into the database) - */ - public boolean isProtectedCaracteristic(Integer pmfmId) { - return propertedPmfmIds.contains(pmfmId); - } - - protected <O, E extends Enum<E> & TuttiEnumerable<O>> void initEnum( - Class<E> enumType, - Map<String, Object> annotatedFieldValues) { - for (E e : enumType.getEnumConstants()) { - if (!e.isInit()) { - String fieldName = e.getFieldName(); - Object field = annotatedFieldValues.get(fieldName); - Preconditions.checkNotNull( - field, - "Could not find field " + fieldName + ")"); - e.setFieldValue((O) field); - e.setInit(true); - } - - } - } -} Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TuttiPersistenceServiceLocator.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TuttiPersistenceServiceLocator.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TuttiPersistenceServiceLocator.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -51,11 +51,6 @@ instance().init(beanFactoryReferenceLocation, beanRefFactoryReferenceId); } - public static TuttiEnumerationFile getTuttiEnumerationFile() { - return instance().getService("tuttiEnumerationFile", - TuttiEnumerationFile.class); - } - public static TuttiPersistence getPersistenceService() { return getPersistenceService("tuttiPersistence", TuttiPersistence.class); Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchPersistenceHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchPersistenceHelper.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchPersistenceHelper.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -27,6 +27,7 @@ import com.google.common.base.Joiner; import com.google.common.base.Preconditions; import com.google.common.collect.Lists; +import fr.ifremer.adagio.core.dao.administration.user.DepartmentId; import fr.ifremer.adagio.core.dao.data.batch.Batch; import fr.ifremer.adagio.core.dao.data.batch.CatchBatch; import fr.ifremer.adagio.core.dao.data.batch.CatchBatchExtendDao; @@ -35,10 +36,12 @@ import fr.ifremer.adagio.core.dao.data.batch.validator.CatchBatchValidationError; import fr.ifremer.adagio.core.dao.data.batch.validator.CatchBatchValidationException; import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.adagio.core.dao.referential.pmfm.Pmfm; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueId; import fr.ifremer.tutti.persistence.InvalidBatchModelException; import fr.ifremer.tutti.persistence.entities.TuttiEntity; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.BatchContainer; import fr.ifremer.tutti.persistence.entities.data.BenthosBatch; import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; @@ -168,7 +171,7 @@ getCurrentSession().flush(); attachmentPersistenceService.deleteAllAttachment( - AttachementObjectTypeEnum.BATCH, + ObjectTypeCode2.BATCH, ids.toArray(new Integer[ids.size()])); } @@ -184,7 +187,7 @@ catchBatchDao.removeWithChildren(batchId); attachmentPersistenceService.deleteAllAttachment( - AttachementObjectTypeEnum.BATCH, + ObjectTypeCode2.BATCH, ids.toArray(new Integer[ids.size()])); } @@ -194,7 +197,7 @@ catchBatchDao.removeWithChildren(batchId, parentCatchBatch); attachmentPersistenceService.deleteAllAttachment( - AttachementObjectTypeEnum.BATCH, + ObjectTypeCode2.BATCH, ids.toArray(new Integer[ids.size()])); } @@ -315,16 +318,16 @@ // Or retrieve parent batch, from pmfm id // Retrieve category type - if (!sampleCategoryId.equals(enumeration.PMFM_ID_SORTED_UNSORTED)) { + if (!sampleCategoryId.equals(PmfmId2.SORTED_UNSORTED.getValue())) { throw new DataIntegrityViolationException(MessageFormat.format( "A species or benthos batch with no parent should have a sampleCategoryType {0} (PMFM.ID={1})", sampleCategoryId, - enumeration.PMFM_ID_SORTED_UNSORTED)); + PmfmId2.SORTED_UNSORTED.getValue())); } Integer qualitativeValueId = convertSampleCategoryValueIntoQualitativeId(sampleCategoryValue); - if (enumeration.QUALITATIVE_VRAC_ID.equals(qualitativeValueId)) { + if (QualitativeValueId.SORTED_VRAC.getValue().equals(qualitativeValueId)) { // -- Vrac > Species > Alive itemized parentBatch = batchTreeHelper.getSpeciesVracAliveItemizedRootBatch(catchBatch); @@ -349,7 +352,7 @@ parentBatch = batchTreeHelper.getOrCreateSpeciesVracAliveItemizedRootBatch(catchBatch, vracSpeciesBatch); } - } else if (enumeration.QUALITATIVE_HORS_VRAC_ID.equals(qualitativeValueId)) { + } else if (QualitativeValueId.SORTED_HORS_VRAC.getValue().equals(qualitativeValueId)) { // -- Hors Vrac > Species parentBatch = batchTreeHelper.getSpeciesHorsVracRootBatch(catchBatch); @@ -394,16 +397,16 @@ // Or retrieve parent batch, from pmfm id // Retrieve category type - if (!sampleCategoryType.equals(enumeration.PMFM_ID_SORTED_UNSORTED)) { + if (!sampleCategoryType.equals(PmfmId2.SORTED_UNSORTED.getValue())) { throw new DataIntegrityViolationException(MessageFormat.format( "A species or benthos batch with no parent should have a sampleCategoryType {0} (PMFM.ID={1})", sampleCategoryType, - enumeration.PMFM_ID_SORTED_UNSORTED)); + PmfmId2.SORTED_UNSORTED.getValue())); } Integer qualitativeValueId = convertSampleCategoryValueIntoQualitativeId(sampleCategoryValue); - if (enumeration.QUALITATIVE_VRAC_ID.equals(qualitativeValueId)) { + if (QualitativeValueId.SORTED_VRAC.getValue().equals(qualitativeValueId)) { // -- Vrac > Benthos > Alive Itemized parentBatch = batchTreeHelper.getBenthosVracAliveItemizedRootBatch(catchBatch); @@ -428,7 +431,7 @@ parentBatch = batchTreeHelper.getOrCreateBenthosVracAliveItemizedRootBatch(catchBatch, vracBenthosBatch); } - } else if (enumeration.QUALITATIVE_HORS_VRAC_ID.equals(qualitativeValueId)) { + } else if (QualitativeValueId.SORTED_HORS_VRAC.getValue().equals(qualitativeValueId)) { // -- Hors Vrac > Benthos parentBatch = batchTreeHelper.getBenthosHorsVracRootBatch(catchBatch); @@ -512,6 +515,9 @@ } } +// protected Integer getSortingTypeId() { +// return Integer.valueOf(PmfmId2.SCIENTIFIC_CRUISE_SORTING_TYPE.getValue()); +// } public <S extends SpeciesAbleBatch> void setSampleCategoryQualitative(S target, Integer pmfmId, @@ -519,7 +525,7 @@ String alphanumericalValue, Integer qualitativeValueId) { // skip if null or corresponding to the SORTING_TYPE PMFM (Espèce, Benthos, Plancton, etc.) - if (pmfmId == null || pmfmId.equals(enumeration.PMFM_ID_SORTING_TYPE)) { + if (pmfmId == null || pmfmId.equals(BatchTreeHelper.SORTING_TYPE_ID)) { return; } SampleCategoryModel sampleCategoryModel = getSampleCategoryModel(); @@ -593,7 +599,7 @@ protected Integer getRecorderDepartmentId() { // TODO BL : voir si on peut récupérer le departement (du 1er saisisseur ?) - return enumeration.DEPARTMENT_ID_UNKNOWN_RECORDER_DEPARTMENT; + return DepartmentId.UNKOWN_RECODER_DEPARTMENT.getValue(); } /** Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchTreeHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchTreeHelper.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchTreeHelper.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -9,7 +9,10 @@ import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; +import fr.ifremer.adagio.core.dao.referential.QualityFlagCode; import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueId; import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxon; import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxonImpl; import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; @@ -40,6 +43,10 @@ @Component("batchTreeHelper") public class BatchTreeHelper extends AbstractPersistenceService { + public static final Integer SORTING_TYPE_ID = PmfmId2.SCIENTIFIC_CRUISE_SORTING_TYPE.getValue(); + + public static final Integer SORTING_TYPE2_ID = PmfmId2.SCIENTIFIC_CRUISE_SORTING_TYPE2.getValue(); + /** Logger. */ private static final Log log = LogFactory.getLog(BatchTreeHelper.class); @@ -59,9 +66,9 @@ return getSortingBatch( batch, "Vrac > Species > Alive Itemized", - enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_VRAC_ID, - enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, - enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED + PmfmId2.SORTED_UNSORTED.getValue(), QualitativeValueId.SORTED_VRAC.getValue(), + SORTING_TYPE_ID, QualitativeValueId.SORTING_TYPE_SPECIES.getValue(), + SORTING_TYPE2_ID, QualitativeValueId.SORTING_TYPE2_ALIVE_ITEMIZED.getValue() ); } @@ -69,9 +76,9 @@ return getSortingBatch( batch, "Vrac > Benthos > Alive itemized", - enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_VRAC_ID, - enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS, - enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED + PmfmId2.SORTED_UNSORTED.getValue(), QualitativeValueId.SORTED_VRAC.getValue(), + SORTING_TYPE_ID, QualitativeValueId.SORTING_TYPE_BENTHOS.getValue(), + SORTING_TYPE2_ID, QualitativeValueId.SORTING_TYPE2_ALIVE_ITEMIZED.getValue() ); } @@ -79,8 +86,8 @@ return getSortingBatch( batch, "Hors Vrac > Species", - enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_HORS_VRAC_ID, - enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES + PmfmId2.SORTED_UNSORTED.getValue(), QualitativeValueId.SORTED_HORS_VRAC.getValue(), + SORTING_TYPE_ID, QualitativeValueId.SORTING_TYPE_SPECIES.getValue() ); } @@ -88,8 +95,8 @@ return getSortingBatch( batch, "Hors Vrac > Benthos", - enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_HORS_VRAC_ID, - enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS + PmfmId2.SORTED_UNSORTED.getValue(), QualitativeValueId.SORTED_HORS_VRAC.getValue(), + SORTING_TYPE_ID, QualitativeValueId.SORTING_TYPE_BENTHOS.getValue() ); } @@ -97,10 +104,10 @@ return getSortingBatch( batch, "Hors Vrac > Marine Litter", - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_HORS_VRAC_ID, - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_MARINE_LITTER + PmfmId2.SORTED_UNSORTED.getValue(), + QualitativeValueId.SORTED_HORS_VRAC.getValue(), + SORTING_TYPE_ID, + QualitativeValueId.SORTING_TYPE_MARINE_LITTER.getValue() ); } @@ -108,8 +115,8 @@ return getSortingBatch( batch, "Vrac", - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_VRAC_ID + PmfmId2.SORTED_UNSORTED.getValue(), + QualitativeValueId.SORTED_VRAC.getValue() ); } @@ -117,8 +124,8 @@ return getSortingBatch( batch, "Hors Vrac", - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_HORS_VRAC_ID + PmfmId2.SORTED_UNSORTED.getValue(), + QualitativeValueId.SORTED_HORS_VRAC.getValue() ); } @@ -126,8 +133,8 @@ return getSortingBatch( batch, "Unsorted", - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_UNSORTED_ID + PmfmId2.SORTED_UNSORTED.getValue(), + QualitativeValueId.UNSORTED.getValue() ); } @@ -139,8 +146,8 @@ return getSortingBatch( batch, "Vrac > Species", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES + SORTING_TYPE_ID, + QualitativeValueId.SORTING_TYPE_SPECIES.getValue() ); } @@ -148,8 +155,8 @@ return getSortingBatch( batch, "Vrac > Benthos", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS + SORTING_TYPE_ID, + QualitativeValueId.SORTING_TYPE_BENTHOS.getValue() ); } @@ -157,8 +164,8 @@ return getSortingBatch( batch, "Vrac > Species > Alive not itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED + SORTING_TYPE2_ID, + QualitativeValueId.SORTING_TYPE2_ALIVE_NOT_ITEMIZED.getValue() ); } @@ -166,8 +173,8 @@ return getSortingBatch( batch, "Vrac > Benthos > Alive not itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED + SORTING_TYPE2_ID, + QualitativeValueId.SORTING_TYPE2_ALIVE_NOT_ITEMIZED.getValue() ); } @@ -175,8 +182,8 @@ return getSortingBatch( batch, "Vrac > Species > Inert (not alive)", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT + SORTING_TYPE2_ID, + QualitativeValueId.SORTING_TYPE2_INERT.getValue() ); } @@ -184,8 +191,8 @@ return getSortingBatch( batch, "Vrac > Benthos > Inert (not alive)", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT + SORTING_TYPE2_ID, + QualitativeValueId.SORTING_TYPE2_INERT.getValue() ); } @@ -193,8 +200,8 @@ return getSortingBatch( batch, "Vrac > Species > Alive itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED + SORTING_TYPE2_ID, + QualitativeValueId.SORTING_TYPE2_ALIVE_ITEMIZED.getValue() ); } @@ -202,8 +209,8 @@ return getSortingBatch( batch, "Vrac > Benthos > Alive itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED + SORTING_TYPE2_ID, + QualitativeValueId.SORTING_TYPE2_ALIVE_ITEMIZED.getValue() ); } @@ -211,8 +218,8 @@ return getSortingBatch( batch, "Hors Vrac > Species", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES + SORTING_TYPE_ID, + QualitativeValueId.SORTING_TYPE_SPECIES.getValue() ); } @@ -220,8 +227,8 @@ return getSortingBatch( batch, "Hors Vrac > Benthos", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS + SORTING_TYPE_ID, + QualitativeValueId.SORTING_TYPE_BENTHOS.getValue() ); } @@ -229,8 +236,8 @@ return getSortingBatch( batch, "Hors Vrac > MarineLitter", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_MARINE_LITTER + SORTING_TYPE_ID, + QualitativeValueId.SORTING_TYPE_MARINE_LITTER.getValue() ); } @@ -245,8 +252,8 @@ batch, batch, "Vrac", - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_VRAC_ID, + PmfmId2.SORTED_UNSORTED.getValue(), + QualitativeValueId.SORTED_VRAC.getValue(), weight, weightBeforeSampling, (short) 1 @@ -260,8 +267,8 @@ target, batch, "Vrac > Species", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, + SORTING_TYPE_ID, + QualitativeValueId.SORTING_TYPE_SPECIES.getValue(), totalWeight, (short) 1 ); @@ -274,8 +281,8 @@ target, batch, "Vrac > Species > Alive Not Itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED, + SORTING_TYPE2_ID, + QualitativeValueId.SORTING_TYPE2_ALIVE_NOT_ITEMIZED.getValue(), totalWeight, (short) 1 ); @@ -288,8 +295,8 @@ target, batch, "Vrac > Species > Inert", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT, + SORTING_TYPE2_ID, + QualitativeValueId.SORTING_TYPE2_INERT.getValue(), totalWeight, (short) 2 ); @@ -301,8 +308,8 @@ target, batch, "Vrac > Benthos > Alive Itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED, + SORTING_TYPE2_ID, + QualitativeValueId.SORTING_TYPE2_ALIVE_ITEMIZED.getValue(), null, (short) 3 ); @@ -315,8 +322,8 @@ target, batch, "Vrac > Benthos", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS, + SORTING_TYPE_ID, + QualitativeValueId.SORTING_TYPE_BENTHOS.getValue(), totalWeight, (short) 2 ); @@ -329,8 +336,8 @@ target, batch, "Vrac > Benthos > Alive Not itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED, + SORTING_TYPE2_ID, + QualitativeValueId.SORTING_TYPE2_ALIVE_NOT_ITEMIZED.getValue(), totalWeight, (short) 1 ); @@ -343,8 +350,8 @@ target, batch, "Vrac > Benthos > Inert", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT, + SORTING_TYPE2_ID, + QualitativeValueId.SORTING_TYPE2_INERT.getValue(), totalWeight, (short) 2 ); @@ -356,8 +363,8 @@ target, batch, "Vrac > Benthos > Alive Itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED, + SORTING_TYPE2_ID, + QualitativeValueId.SORTING_TYPE2_ALIVE_ITEMIZED.getValue(), null, (short) 3 ); @@ -368,8 +375,8 @@ batch, batch, "Hors Vrac", - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_HORS_VRAC_ID, + PmfmId2.SORTED_UNSORTED.getValue(), + QualitativeValueId.SORTED_HORS_VRAC.getValue(), null, (short) 2 ); @@ -381,8 +388,8 @@ target, batch, "Hors Vrac > Species", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, + SORTING_TYPE_ID, + QualitativeValueId.SORTING_TYPE_SPECIES.getValue(), null, (short) 1 ); @@ -394,8 +401,8 @@ target, batch, "Hors Vrac > Benthos", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS, + SORTING_TYPE_ID, + QualitativeValueId.SORTING_TYPE_BENTHOS.getValue(), null, (short) 2 ); @@ -408,8 +415,8 @@ target, batch, "Hors Vrac > Marine Litter", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_MARINE_LITTER, + SORTING_TYPE_ID, + QualitativeValueId.SORTING_TYPE_MARINE_LITTER.getValue(), totalWeight, (short) 3 ); @@ -422,8 +429,8 @@ batch, batch, "Unsorted", - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_UNSORTED_ID, + PmfmId2.SORTED_UNSORTED.getValue(), + QualitativeValueId.UNSORTED.getValue(), weight, (short) 3 ); @@ -522,7 +529,7 @@ } // Some mandatory properties : - QualityFlagImpl qualityFlag = load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED); + QualityFlagImpl qualityFlag = load(QualityFlagImpl.class, QualityFlagCode.NOTQUALIFIED.getValue()); result.setQualityFlag(qualityFlag); result.setRootBatch(rootBatch); result.setParentBatch(batch); Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/MeasurementPersistenceHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/MeasurementPersistenceHelper.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/MeasurementPersistenceHelper.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -26,6 +26,7 @@ import com.google.common.base.Preconditions; import com.google.common.collect.Sets; +import fr.ifremer.adagio.core.dao.administration.user.DepartmentId; import fr.ifremer.adagio.core.dao.data.batch.Batch; import fr.ifremer.adagio.core.dao.data.batch.CatchBatchExtendDao; import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; @@ -39,8 +40,10 @@ import fr.ifremer.adagio.core.dao.data.survey.scientificCruise.ScientificCruise; import fr.ifremer.adagio.core.dao.data.vessel.feature.use.GearUseFeatures; import fr.ifremer.adagio.core.dao.data.vessel.feature.use.VesselUseFeatures; +import fr.ifremer.adagio.core.dao.referential.QualityFlagCode; import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; import fr.ifremer.adagio.core.dao.referential.pmfm.Pmfm; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmImpl; import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValue; import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueImpl; @@ -116,16 +119,16 @@ } public QuantificationMeasurement setWeightMeasurementQuantificationMeasurement(Batch batch, Float weightValue) { - return catchBatchDao.setQuantificationMeasurement(batch, enumeration.PMFM_ID_WEIGHT_MEASURED, getRecorderDepartmentId(), weightValue, true); + return catchBatchDao.setQuantificationMeasurement(batch, PmfmId2.WEIGHT_MEASURED.getValue(), getRecorderDepartmentId(), weightValue, true); } public QuantificationMeasurement getWeightMeasurementQuantificationMeasurement(Batch batch) { - QuantificationMeasurement quantificationMeasurement = catchBatchDao.getQuantificationMeasurement(batch, enumeration.PMFM_ID_WEIGHT_MEASURED, getRecorderDepartmentId(), false); + QuantificationMeasurement quantificationMeasurement = catchBatchDao.getQuantificationMeasurement(batch, PmfmId2.WEIGHT_MEASURED.getValue(), getRecorderDepartmentId(), false); return quantificationMeasurement; } public SortingMeasurement getInheritedSortingMeasurement(SortingBatch sortingBatch) { - return catchBatchDao.getInheritedSortingMeasurement(sortingBatch, enumeration.PMFM_ID_SORTED_UNSORTED); + return catchBatchDao.getInheritedSortingMeasurement(sortingBatch, PmfmId2.SORTED_UNSORTED.getValue()); } //------------------------------------------------------------------------// @@ -133,10 +136,10 @@ //------------------------------------------------------------------------// public VesselUseMeasurement setVesselUseMeasurement(ScientificCruise scientificCruise, VesselUseFeatures vesselUseFeatures, - Integer pmfmId, - Float numericalValue, - String alphanumericalValue, - Integer qualitativevalueId) { + Integer pmfmId, + Float numericalValue, + String alphanumericalValue, + Integer qualitativevalueId) { VesselUseMeasurement vesselUseMeasurement = getVesselUseMeasurement(scientificCruise, vesselUseFeatures, pmfmId, true); if (alphanumericalValue != null) { @@ -179,7 +182,7 @@ } else { vesselUseFeatures.getVesselUseMeasurements().add(vesselUseMeasurement); } - vesselUseMeasurement.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + vesselUseMeasurement.setQualityFlag(load(QualityFlagImpl.class, QualityFlagCode.NOTQUALIFIED.getValue())); vesselUseMeasurement.setDepartment(scientificCruise.getRecorderDepartment()); vesselUseMeasurement.setPmfm(load(PmfmImpl.class, pmfmId)); } @@ -208,10 +211,10 @@ //------------------------------------------------------------------------// public GearUseMeasurement setGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, - Integer pmfmId, - Float numericalValue, - String alphanumericalValue, - Integer qualitativevalueId) { + Integer pmfmId, + Float numericalValue, + String alphanumericalValue, + Integer qualitativevalueId) { GearUseMeasurement gearUseMeasurement = getGearUseMeasurement(scientificCruise, gearUseFeatures, pmfmId, true); if (alphanumericalValue != null) { @@ -255,7 +258,7 @@ } else { gearUseFeatures.getGearUseMeasurements().add(gearUseMeasurement); } - gearUseMeasurement.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + gearUseMeasurement.setQualityFlag(load(QualityFlagImpl.class, QualityFlagCode.NOTQUALIFIED.getValue())); gearUseMeasurement.setDepartment(scientificCruise.getRecorderDepartment()); Pmfm pmfm = (Pmfm) getCurrentSession().load(PmfmImpl.class, pmfmId); gearUseMeasurement.setPmfm(pmfm); @@ -328,7 +331,7 @@ Integer qualitativevalueId) { SurveyMeasurement result = SurveyMeasurement.Factory.newInstance(); - result.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + result.setQualityFlag(load(QualityFlagImpl.class, QualityFlagCode.NOTQUALIFIED.getValue())); result.setDepartment(fishingTrip.getRecorderDepartment()); Pmfm pmfm = load(PmfmImpl.class, pmfmId); result.setPmfm(pmfm); @@ -369,6 +372,6 @@ protected Integer getRecorderDepartmentId() { // TODO BL : voir si on peut récupérer le departement (du 1er saisisseur ?) - return enumeration.DEPARTMENT_ID_UNKNOWN_RECORDER_DEPARTMENT; + return DepartmentId.UNKOWN_RECODER_DEPARTMENT.getValue(); } } Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/SamplePersistenceHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/SamplePersistenceHelper.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/SamplePersistenceHelper.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -28,11 +28,12 @@ import fr.ifremer.adagio.core.dao.data.measure.SampleMeasurement; import fr.ifremer.adagio.core.dao.data.sample.Sample; import fr.ifremer.adagio.core.dao.data.sample.SampleDao; +import fr.ifremer.adagio.core.dao.referential.QualityFlagCode; import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmImpl; import fr.ifremer.tutti.persistence.entities.CaracteristicMap; import fr.ifremer.tutti.persistence.entities.TuttiEntities; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; import fr.ifremer.tutti.persistence.service.AttachmentPersistenceService; @@ -85,7 +86,7 @@ sample.getSampleMeasurements().clear(); sampleDao.remove(sample); attachmentPersistenceService.deleteAllAttachment( - AttachementObjectTypeEnum.SAMPLE, + ObjectTypeCode2.SAMPLE, sampleId); } } @@ -169,7 +170,7 @@ } else { sample.getSampleMeasurements().add(result); } - result.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + result.setQualityFlag(load(QualityFlagImpl.class, QualityFlagCode.NOTQUALIFIED.getValue())); result.setDepartment(sample.getRecorderDepartment()); result.setPmfm(load(PmfmImpl.class, pmfmId)); } Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/VesselPersonFeaturesPersistenceHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/VesselPersonFeaturesPersistenceHelper.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/VesselPersonFeaturesPersistenceHelper.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -30,6 +30,7 @@ import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; import fr.ifremer.adagio.core.dao.data.vessel.feature.person.VesselPersonFeatures; import fr.ifremer.adagio.core.dao.referential.VesselPersonRole; +import fr.ifremer.adagio.core.dao.referential.VesselPersonRoleId; import fr.ifremer.adagio.core.dao.referential.VesselPersonRoleImpl; import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; import org.apache.commons.logging.Log; @@ -56,15 +57,15 @@ } public VesselPersonRole getScientificCruiseManagerRole() { - return load(VesselPersonRoleImpl.class, enumeration.VESSEL_PERSON_ROLE_ID_SCIENTIFIC_CRUISE_MANAGER); + return load(VesselPersonRoleImpl.class, VesselPersonRoleId.SCIENTIFIC_CRUISE_MANAGER.getValue()); } public VesselPersonRole getSortRoomManagerRole() { - return load(VesselPersonRoleImpl.class, enumeration.VESSEL_PERSON_ROLE_ID_SORT_ROOM_MANAGER); + return load(VesselPersonRoleImpl.class, VesselPersonRoleId.SORT_ROOM_MANAGER.getValue()); } public VesselPersonRole getRecorderPersonRole() { - return load(VesselPersonRoleImpl.class, enumeration.VESSEL_PERSON_ROLE_ID_RECORDER_PERSON); + return load(VesselPersonRoleImpl.class, VesselPersonRoleId.RECORDER_PERSON.getValue()); } public void fillVesselPersonFeatures(Map<Integer, VesselPersonFeatures> vesselPersonFeaturesPerPerson, Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/test/DatabaseFixtures.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/test/DatabaseFixtures.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/test/DatabaseFixtures.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -73,7 +73,7 @@ public class DatabaseFixtures { public Version lastAdagioSchemaVersion() { - return VersionUtil.valueOf("3.4.1"); + return VersionUtil.valueOf("3.5.0"); } public Version currentAdagioSchemaVersion() { Modified: trunk/tutti-persistence/src/main/resources/applicationContext-service-tutti.xml =================================================================== --- trunk/tutti-persistence/src/main/resources/applicationContext-service-tutti.xml 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/resources/applicationContext-service-tutti.xml 2014-04-24 10:17:09 UTC (rev 1725) @@ -36,9 +36,6 @@ <bean id="tuttiPersistence" class="fr.ifremer.tutti.persistence.TuttiPersistenceImpl"/> - <bean id="tuttiEnumerationFile" init-method="init" - class="fr.ifremer.tutti.persistence.service.TuttiEnumerationFile"/> -    @@ -47,26 +44,18 @@ <bean id="tuttiProgramsCache" parent="abstractEternalCache"> <property name="cacheName" value="programs" /> -  -  </bean> <bean id="tuttiProgramZonesCache" parent="abstractEternalCache"> <property name="cacheName" value="programZones" /> -  -  </bean> <bean id="countriesCache" parent="abstractEternalCache"> <property name="cacheName" value="countries" /> -  -  </bean> <bean id="harboursCache" parent="abstractEternalCache"> <property name="cacheName" value="harbours" /> -  -  </bean> <bean id="tuttiPmfmsCache" parent="abstractEternalCache"> @@ -90,56 +79,38 @@ <bean id="tuttiFishingVesselsCache" parent="abstractEternalCache"> <property name="cacheName" value="fishingVessels" /> -  -  </bean> <bean id="tuttiFishingVesselByCodeCache" parent="abstractEternalCache"> <property name="cacheName" value="vesselByCode" /> -  -  </bean> <bean id="tuttiSpeciesCache" parent="abstractEternalCache"> <property name="cacheName" value="species" /> -  -  </bean> <bean id="tuttiReferentSpeciesCache" parent="abstractEternalCache"> <property name="cacheName" value="referentSpecies" /> -  -  </bean> <bean id="tuttiReferentSpeciesByIdCache" parent="abstractEternalCache"> <property name="cacheName" value="referentSpeciesById" /> -  -  </bean> <bean id="tuttiReferentSpeciesByIdVenacularCache" parent="abstractEternalCache"> <property name="cacheName" value="referentSpeciesByIdVernacular" /> -  -  </bean> <bean id="tuttiGearsCache" parent="abstractEternalCache"> <property name="cacheName" value="gears" /> -  -  </bean> <bean id="tuttiPersonsCache" parent="abstractEternalCache"> <property name="cacheName" value="persons" /> -  -  </bean> <bean id="tuttiPersonByIdCache" parent="abstractEternalCache"> <property name="cacheName" value="personById" /> -  -  </bean> </beans> \ No newline at end of file Modified: trunk/tutti-persistence/src/main/resources/i18n/tutti-persistence_en_GB.properties =================================================================== --- trunk/tutti-persistence/src/main/resources/i18n/tutti-persistence_en_GB.properties 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/resources/i18n/tutti-persistence_en_GB.properties 2014-04-24 10:17:09 UTC (rev 1725) @@ -1,3 +1,43 @@ +adagio.enumeration.MatrixId.PRODUCT_BATCH.description= +adagio.enumeration.ObjectTypeCode.ACTIVITY_CALENDAR.description= +adagio.enumeration.ObjectTypeCode.BATCH.description= +adagio.enumeration.ObjectTypeCode.CATCH_BATCH.description= +adagio.enumeration.ObjectTypeCode.DAILY_ACTIVITY_CALENDAR.description= +adagio.enumeration.ObjectTypeCode.FISHING_TRIP.description= +adagio.enumeration.ObjectTypeCode.LANDING.description= +adagio.enumeration.ObjectTypeCode.OPERATION.description= +adagio.enumeration.ObjectTypeCode.SALE.description= +adagio.enumeration.ObjectTypeCode.SAMPLE.description= +adagio.enumeration.ObjectTypeCode.SCIENTIFIC_CRUISE.description= +adagio.enumeration.PmfmId.AGE.description= +adagio.enumeration.PmfmId.DEAD_OR_ALIVE.description= +adagio.enumeration.PmfmId.HAUL_VALID.description= +adagio.enumeration.PmfmId.HORIZONTAL_OPENING_DOOR.description= +adagio.enumeration.PmfmId.HORIZONTAL_OPENING_WINGS.description= +adagio.enumeration.PmfmId.ID_PSFM.description= +adagio.enumeration.PmfmId.MARINE_LITTER_SIZE_CATEGORY.description= +adagio.enumeration.PmfmId.MARINE_LITTER_TYPE.description= +adagio.enumeration.PmfmId.MATURITY.description= +adagio.enumeration.PmfmId.MULTIRIG_AGGREGATION.description= +adagio.enumeration.PmfmId.MULTIRIG_NUMBER.description= +adagio.enumeration.PmfmId.RECTILINEAR_OPERATION.description= +adagio.enumeration.PmfmId.SCIENTIFIC_CRUISE_SORTING_TYPE.description= +adagio.enumeration.PmfmId.SCIENTIFIC_CRUISE_SORTING_TYPE2.description= +adagio.enumeration.PmfmId.SEX.description= +adagio.enumeration.PmfmId.SIZE_CATEGORY.description= +adagio.enumeration.PmfmId.SORTED_UNSORTED.description= +adagio.enumeration.PmfmId.SORTING_TYPE_TCC.description= +adagio.enumeration.PmfmId.STATION_NUMBER.description= +adagio.enumeration.PmfmId.SURVEY_PART.description= +adagio.enumeration.PmfmId.TRAWL_DISTANCE.description= +adagio.enumeration.PmfmId.VERTICAL_OPENING.description= +adagio.enumeration.PmfmId.WEIGHT_MEASURED.description= +adagio.enumeration.QualitativeValueId.MATURITY_1.description= +adagio.enumeration.QualitativeValueId.MATURITY_2.description= +adagio.enumeration.QualitativeValueId.MATURITY_3.description= +adagio.enumeration.QualitativeValueId.MATURITY_4.description= +adagio.enumeration.QualitativeValueId.MATURITY_5.description= +adagio.enumeration.QualitativeValueId.SEX_UNDEFINED.description= application.common.unit=Unit application.common.unit.g=Gram application.common.unit.kg=Kilogram Modified: trunk/tutti-persistence/src/main/resources/i18n/tutti-persistence_fr_FR.properties =================================================================== --- trunk/tutti-persistence/src/main/resources/i18n/tutti-persistence_fr_FR.properties 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/resources/i18n/tutti-persistence_fr_FR.properties 2014-04-24 10:17:09 UTC (rev 1725) @@ -1,3 +1,43 @@ +adagio.enumeration.MatrixId.PRODUCT_BATCH.description= +adagio.enumeration.ObjectTypeCode.ACTIVITY_CALENDAR.description= +adagio.enumeration.ObjectTypeCode.BATCH.description= +adagio.enumeration.ObjectTypeCode.CATCH_BATCH.description= +adagio.enumeration.ObjectTypeCode.DAILY_ACTIVITY_CALENDAR.description= +adagio.enumeration.ObjectTypeCode.FISHING_TRIP.description= +adagio.enumeration.ObjectTypeCode.LANDING.description= +adagio.enumeration.ObjectTypeCode.OPERATION.description= +adagio.enumeration.ObjectTypeCode.SALE.description= +adagio.enumeration.ObjectTypeCode.SAMPLE.description= +adagio.enumeration.ObjectTypeCode.SCIENTIFIC_CRUISE.description= +adagio.enumeration.PmfmId.AGE.description= +adagio.enumeration.PmfmId.DEAD_OR_ALIVE.description= +adagio.enumeration.PmfmId.HAUL_VALID.description= +adagio.enumeration.PmfmId.HORIZONTAL_OPENING_DOOR.description= +adagio.enumeration.PmfmId.HORIZONTAL_OPENING_WINGS.description= +adagio.enumeration.PmfmId.ID_PSFM.description= +adagio.enumeration.PmfmId.MARINE_LITTER_SIZE_CATEGORY.description= +adagio.enumeration.PmfmId.MARINE_LITTER_TYPE.description= +adagio.enumeration.PmfmId.MATURITY.description= +adagio.enumeration.PmfmId.MULTIRIG_AGGREGATION.description= +adagio.enumeration.PmfmId.MULTIRIG_NUMBER.description= +adagio.enumeration.PmfmId.RECTILINEAR_OPERATION.description= +adagio.enumeration.PmfmId.SCIENTIFIC_CRUISE_SORTING_TYPE.description= +adagio.enumeration.PmfmId.SCIENTIFIC_CRUISE_SORTING_TYPE2.description= +adagio.enumeration.PmfmId.SEX.description= +adagio.enumeration.PmfmId.SIZE_CATEGORY.description= +adagio.enumeration.PmfmId.SORTED_UNSORTED.description= +adagio.enumeration.PmfmId.SORTING_TYPE_TCC.description= +adagio.enumeration.PmfmId.STATION_NUMBER.description= +adagio.enumeration.PmfmId.SURVEY_PART.description= +adagio.enumeration.PmfmId.TRAWL_DISTANCE.description= +adagio.enumeration.PmfmId.VERTICAL_OPENING.description= +adagio.enumeration.PmfmId.WEIGHT_MEASURED.description= +adagio.enumeration.QualitativeValueId.MATURITY_1.description= +adagio.enumeration.QualitativeValueId.MATURITY_2.description= +adagio.enumeration.QualitativeValueId.MATURITY_3.description= +adagio.enumeration.QualitativeValueId.MATURITY_4.description= +adagio.enumeration.QualitativeValueId.MATURITY_5.description= +adagio.enumeration.QualitativeValueId.SEX_UNDEFINED.description= application.common.unit=Unité application.common.unit.g=Gramme application.common.unit.kg=Kilogramme Modified: trunk/tutti-persistence/src/main/resources/tutti-db-enumerations.properties =================================================================== --- trunk/tutti-persistence/src/main/resources/tutti-db-enumerations.properties 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/main/resources/tutti-db-enumerations.properties 2014-04-24 10:17:09 UTC (rev 1725) @@ -22,130 +22,24 @@ # #L% ### -#MatrixId.SUPPORT_WITH_GEAR=17 -#MatrixId.SUPPORT_WITH_METIER=18 -#LocationLevelId.RECTANGLE_STATISTIQUE_MED=145 - ################################################################################ ### Ajout pour Tutti ########################################################### ################################################################################ -# zone d'étude SCIENTIFIC_CRUISE_PROGRAM -#LocationLevelId.PROGRAM=301 -# strate SCIENTIFIC_CRUISE_STRATA -#LocationLevelId.STRATA=302 -# sous strate SCIENTIFIC_CRUISE_SUB_STRATA -#LocationLevelId.SUB_STRATA=303 -# localité SCIENTIFIC_CRUISE_LOCALITE -#LocationLevelId.LOCALITE=304 -# radiale SCIENTIFIC_CRUISE_RADIALE -#LocationLevelId.RADIALE=305 +# PSFM "Pour référencer un autre id de pmfm" +PmfmId.ID_PSFM=1433 -# Catégorie Sex -#PmfmId.SEX=196 -QualitativeValueId.SEX_UNDEFINED=299 -#QualitativeValueId.SEX_MALE=300 -#QualitativeValueId.SEX_FEMALE=301 +MatrixId.PRODUCT_BATCH=1 -# Catégorie classe de tri -#PmfmId.SIZE_CATEGORY=198 -#QualitativeValueId.SIZE_SMALL=307 -#QualitativeValueId.SIZE_MEDIUM=306 -#QualitativeValueId.SIZE_BIG=305 +ObjectTypeCode.CATCH_BATCH=CATCH_BATCH -# Catégorie Age -#PmfmId.AGE=1430 -# Catégorie maturité -#PmfmId.MATURITY=174 +QualitativeValueId.SEX_UNDEFINED=299 QualitativeValueId.MATURITY_1=272 QualitativeValueId.MATURITY_2=273 QualitativeValueId.MATURITY_3=274 QualitativeValueId.MATURITY_4=275 QualitativeValueId.MATURITY_5=276 - -# Catégorie macro-déchet -#PmfmId.MARINE_LITTER_TYPE=1421 -# Classe de taille macro-déchet -#PmfmId.MARINE_LITTER_SIZE_CATEGORY=1422 - -# Pour stocker Cruise.surveyPart -#PmfmId.SURVEY_PART=1432 - -#PmfmId.STATION_NUMBER=1243 -#PmfmId.TRAWL_DISTANCE=113 - -#PmfmId.HAUL_VALID=1163 -#QualitativeValueId.HAUL_VALID_YES=1575 -#QualitativeValueId.HAUL_VALID_NO=1576 - -#PmfmId.RECTILINEAR_OPERATION=192 -#QualitativeValueId.RECTILINEAR_OPERATION_YES=277 -#QualitativeValueId.RECTILINEAR_OPERATION_NO=278 - -# PSFM "Nombre de poche" d'un chalut (écran campagne) -#PmfmId.MULTIRIG_NUMBER=1420 -# PSFM "Liste des poches observées" (écran opération) -#PmfmId.MULTIRIG_AGGREGATION=1424 - -# PSFM "Poids - observation par une observateur" (écran captures, onglet espèce, benthos, etc) -#PmfmId.WEIGHT_MEASURED=220 - -# PSFM "Vrac/Hors Vrac" - "Organisation des données campagnes" -#PmfmId.SORTED_UNSORTED=1428 -#QualitativeValueId.SORTED_VRAC=311 -#QualitativeValueId.SORTED_HORS_VRAC=310 -#QualitativeValueId.UNSORTED=2146 - -#PmfmId.SCIENTIFIC_CRUISE_SORTING_TYPE=1429 -#QualitativeValueId.SORTING_TYPE_SPECIES=2147 -#QualitativeValueId.SORTING_TYPE_BENTHOS=2148 -#QualitativeValueId.SORTING_TYPE_PLANCTON=2149 -#QualitativeValueId.SORTING_TYPE_MARINE_LITTER=2150 -#QualitativeValueId.SORTING_TYPE_ACCIDENTAL_CATCH=2151 - -PmfmId.SCIENTIFIC_CRUISE_SORTING_TYPE_2=1431 QualitativeValueId.SORTING_TYPE_2_ALIVE_NOT_ITEMIZED=2161 QualitativeValueId.SORTING_TYPE_2_INERT=2162 QualitativeValueId.SORTING_TYPE_2_ALIVE_ITEMIZED=2160 - -# PSFM "Ouverture verticale (chalut ou drague)" (pour export operation) -#PmfmId.VERTICAL_OPENING=832 -# PSFM "Ouverture Horizontale aux pointes d'ailes" (pour export operation) -#PmfmId.HORIZONTAL_OPENING_WING=827 -# PSFM "Ouverture horizontale aux panneaux" (pour export operation) -#PmfmId.HORIZONTAL_OPENING_DOOR=830 - -#PSFM "Remis à l'eau mort ou vivant" -#PmfmId.DEAD_OR_ALIVE=1393 - -# PSFM "Pour référencer un autre id de pmfm" -PmfmId.ID_PSFM=1433 - -PmfmId.SAMPLE_ID=1435 - -PmfmId.OTOLITHE_ID=1436 - -# (20=observateur volant, 95=Administrateur SIH) -> L'avantage du 20 est qu'il est inactif (=20), donc plus facilement detectable -#PersonId.UNKNOWN_RECORDER_PERSON=20 - UserProfilId.DEPARTEMENT_PREFIX=PDG- - -# 181=PDG-RBE (à confirmer par Vincent) -#DepartmentId.UNKNOWN_RECORDER_DEPARTMENT=181 - -#ProgramCode.SCIENTIFIC_CRUISE_PREFIX=CAM- - -#ObjectTypeCode.SCIENTIFIC_CRUISE=SCIENTIFIC_CRUISE -#ObjectTypeCode.OPERATION=OPERATION -ObjectTypeCode.CATCH_BATCH=CATCH_BATCH -#ObjectTypeCode.BATCH=BATCH -#ObjectTypeCode.SAMPLE=SAMPLE - -#VesselPersonRoleId.SCIENTIFIC_CRUISE_MANAGER=2 -#VesselPersonRoleId.SORT_ROOM_MANAGER=3 -#VesselPersonRoleId.RECORDER_PERSON=4 - -TranscribingTypeId.TAXINOMIE_REFTAX_MNEMONIQUE=55 -TranscribingTypeId.TAXINOMIE_COMMUN_NOM_VERNACULAIRE=56 - -MatrixId.PRODUCT_BATCH=1 \ No newline at end of file Modified: trunk/tutti-persistence/src/main/xmi/tutti-persistence.zargo =================================================================== (Binary files differ) Modified: trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocolsTest.java =================================================================== --- trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocolsTest.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/entities/protocol/TuttiProtocolsTest.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -27,7 +27,6 @@ import com.google.common.base.Charsets; import com.google.common.collect.Lists; import com.google.common.io.Files; -import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; import org.apache.commons.lang3.reflect.FieldUtils; import org.junit.Assert; import org.junit.Before; @@ -168,16 +167,16 @@ Files.write(PROTOCOL_FILE_CONTENT, file, Charsets.UTF_8); - TuttiEnumerationFile enumeration = new TuttiEnumerationFile(); +// TuttiEnumerationFile enumeration = new TuttiEnumerationFile(); +// +// setField(enumeration, "PMFM_ID_SORTED_UNSORTED", VRAC_HORS_VRAC); +// setField(enumeration, "PMFM_ID_SIZE_CATEGORY", SIZE); +// setField(enumeration, "PMFM_ID_SEX", SEX); +// setField(enumeration, "PMFM_ID_MATURITY", MATURITY); +// setField(enumeration, "PMFM_ID_AGE", AGE); - setField(enumeration, "PMFM_ID_SORTED_UNSORTED", VRAC_HORS_VRAC); - setField(enumeration, "PMFM_ID_SIZE_CATEGORY", SIZE); - setField(enumeration, "PMFM_ID_SEX", SEX); - setField(enumeration, "PMFM_ID_MATURITY", MATURITY); - setField(enumeration, "PMFM_ID_AGE", AGE); + TuttiProtocol protocol = TuttiProtocols.fromFile(file); - TuttiProtocol protocol = TuttiProtocols.fromFile(enumeration, file); - Assert.assertNotNull(protocol); Assert.assertEquals("1", protocol.getId()); Assert.assertEquals("protocolName", protocol.getName()); Modified: trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/AttachmentPersistenceServiceWriteTest.java =================================================================== --- trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/AttachmentPersistenceServiceWriteTest.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/AttachmentPersistenceServiceWriteTest.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -24,7 +24,7 @@ * #L% */ -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.Attachments; import fr.ifremer.tutti.persistence.test.DatabaseResource; @@ -62,7 +62,7 @@ Integer cruiseId = Integer.valueOf(dbResource.getFixtures().cruiseId()); allAttachments = service.getAllAttachments( - AttachementObjectTypeEnum.SCIENTIFIC_CRUISE, cruiseId); + ObjectTypeCode2.SCIENTIFIC_CRUISE, cruiseId); Assert.assertTrue(allAttachments.isEmpty()); // @@ -70,7 +70,7 @@ // Attachment attachment = Attachments.newAttachment(); - attachment.setObjectType(AttachementObjectTypeEnum.SCIENTIFIC_CRUISE); + attachment.setObjectType(ObjectTypeCode2.SCIENTIFIC_CRUISE); attachment.setObjectId(cruiseId); long buildTime = System.nanoTime(); attachment.setName("AttachmentName-" + buildTime); @@ -93,7 +93,7 @@ // allAttachments = service.getAllAttachments( - AttachementObjectTypeEnum.SCIENTIFIC_CRUISE, cruiseId); + ObjectTypeCode2.SCIENTIFIC_CRUISE, cruiseId); Assert.assertFalse(allAttachments.isEmpty()); Assert.assertEquals(1, allAttachments.size()); @@ -115,7 +115,7 @@ // allAttachments = service.getAllAttachments( - AttachementObjectTypeEnum.SCIENTIFIC_CRUISE, cruiseId); + ObjectTypeCode2.SCIENTIFIC_CRUISE, cruiseId); Assert.assertFalse(allAttachments.isEmpty()); Assert.assertEquals(1, allAttachments.size()); @@ -128,7 +128,7 @@ service.deleteAttachment(attachment.getId()); allAttachments = service.getAllAttachments( - AttachementObjectTypeEnum.SCIENTIFIC_CRUISE, cruiseId); + ObjectTypeCode2.SCIENTIFIC_CRUISE, cruiseId); Assert.assertTrue(allAttachments.isEmpty()); Assert.assertFalse(attachmentFile.exists()); } Modified: trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceReadTest.java =================================================================== --- trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceReadTest.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceReadTest.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -25,6 +25,7 @@ */ import com.google.common.collect.Maps; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; import fr.ifremer.tutti.persistence.entities.data.BatchContainer; import fr.ifremer.tutti.persistence.entities.data.BenthosBatch; import fr.ifremer.tutti.persistence.entities.data.FishingOperation; @@ -63,11 +64,8 @@ protected FishingOperation fishingOperation; - protected TuttiEnumerationFile enumerationFile; - @Before public void setUp() throws Exception { - enumerationFile = TuttiPersistenceServiceLocator.getTechnicalPersistenceService().getEnumerationFile(); service = TuttiPersistenceServiceLocator.getBenthosBatchPersistenceService(); fishingOperationService = TuttiPersistenceServiceLocator.getFishingOperationPersistenceService(); @@ -120,7 +118,7 @@ // Check species only if Vrac/HorsVrac or if batch has been load throw getAllxxx method // (Because getBenthosBatch(id) could not always retrieve the species) if (expectedBatch.getSpecies() != null && ( - enumerationFile.PMFM_ID_SORTED_UNSORTED.equals(expectedBatch.getSampleCategoryId()) + PmfmId2.SORTED_UNSORTED.getValue().equals(expectedBatch.getSampleCategoryId()) || actualBatch.getSpecies() != null)) { assertNotNull(actualBatch.getSpecies()); assertEquals(expectedBatch.getSpecies().getId(), actualBatch.getSpecies().getId()); Modified: trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceWriteTest.java =================================================================== --- trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceWriteTest.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceWriteTest.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -26,6 +26,7 @@ import com.google.common.collect.Lists; import com.google.common.collect.Maps; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; import fr.ifremer.tutti.persistence.entities.data.BenthosBatch; import fr.ifremer.tutti.persistence.entities.data.BenthosBatchFrequency; import fr.ifremer.tutti.persistence.entities.data.BenthosBatchFrequencys; @@ -114,8 +115,6 @@ protected Caracteristic frequencyPMFM; - protected TuttiEnumerationFile enumerationFile; - @Before public void setUp() throws Exception { @@ -124,7 +123,6 @@ catchBatchService = TuttiPersistenceServiceLocator.getCatchBatchPersistenceService(); fishingOperationService = TuttiPersistenceServiceLocator.getFishingOperationPersistenceService(); referentialService = TuttiPersistenceServiceLocator.getReferentialPersistenceService(); - enumerationFile = TuttiPersistenceServiceLocator.getTechnicalPersistenceService().getEnumerationFile(); species = referentialService.getAllSpecies(); assertNotNull(species); @@ -221,7 +219,7 @@ batch.setParentBatch(null); batch.setFishingOperation(fishingOperationNoCatchBatch); batch.setSpecies(taxon1); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_SORTED_UNSORTED); + batch.setSampleCategoryId(PmfmId2.SORTED_UNSORTED.getValue()); batch.setSampleCategoryValue(vracQualitativeValue); batch.setSampleCategoryWeight(5f); @@ -239,7 +237,7 @@ batch.setParentBatch(esp1Batch); batch.setSpecies(taxon1); batch.setComment("ESP1 - Vrac/5 Male/2 ss-ech/1 Nombre/7"); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_SEX); + batch.setSampleCategoryId(PmfmId2.SEX.getValue()); batch.setSampleCategoryValue(maleQualitativeValue); batch.setSampleCategoryWeight(2f); batch.setWeight(1f); @@ -256,7 +254,7 @@ batch.setParentBatch(esp1Batch); batch.setSpecies(taxon1); batch.setComment("ESP1 - Vrac/5 Female/3 Nombre/14"); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_SEX); + batch.setSampleCategoryId(PmfmId2.SEX.getValue()); batch.setSampleCategoryValue(femaleQualitativeValue); batch.setSampleCategoryWeight(3f); batch.setWeight(null); @@ -272,7 +270,7 @@ batch = BenthosBatchs.newBenthosBatch(); batch.setParentBatch(null); batch.setSpecies(taxon2); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_SORTED_UNSORTED); + batch.setSampleCategoryId(PmfmId2.SORTED_UNSORTED.getValue()); batch.setSampleCategoryValue(vracQualitativeValue); batch.setSampleCategoryWeight(7f); @@ -285,7 +283,7 @@ batch.setParentBatch(esp2Batch); batch.setSpecies(taxon2); batch.setComment("ESP2 - Vrac/7 UNK/2 ss-ech/1 Nombre/11"); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_MATURITY); + batch.setSampleCategoryId(PmfmId2.MATURITY.getValue()); batch.setSampleCategoryValue(firstMaturityQualitativeValue); batch.setSampleCategoryWeight(2f); batch.setWeight(1f); @@ -298,7 +296,7 @@ // ----------------------------------------------------------------------------- // Batch : ESP2 - Vrac/7 UNK/1.75 ss-ech/1.11 Nombre/99 batch.setComment("ESP2 - Vrac/7 UNK/1.75 ss-ech/1.11 Nombre/99"); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_SEX); + batch.setSampleCategoryId(PmfmId2.SEX.getValue()); batch.setSampleCategoryValue(unkQualitativeValue); batch.setSampleCategoryWeight(1.75f); batch.setWeight(1.11f); @@ -384,7 +382,7 @@ batch.setParentBatch(null); batch.setFishingOperation(fishingOperationWithEmptyBatch); batch.setSpecies(taxon1); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_SORTED_UNSORTED); + batch.setSampleCategoryId(PmfmId2.SORTED_UNSORTED.getValue()); batch.setSampleCategoryValue(vracQualitativeValue); batch.setSampleCategoryWeight(5f); assertCreateAndReloadBenthosBatch(batch, null); @@ -395,7 +393,7 @@ batch.setParentBatch(esp1Batch); batch.setFishingOperation(fishingOperationWithEmptyBatch); batch.setSpecies(taxon1); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_SEX); + batch.setSampleCategoryId(PmfmId2.SEX.getValue()); batch.setSampleCategoryValue(maleQualitativeValue); batch.setSampleCategoryWeight(2f); assertCreateAndReloadBenthosBatch(batch, esp1Batch.getId()); @@ -458,7 +456,7 @@ // Check species only if Vrac/HorsVrac or if batch has been load throw getAllxxx method // (Because getBenthosBatch(id) could not always retrieve the species) if (expectedBatch.getSpecies() != null && ( - enumerationFile.PMFM_ID_SORTED_UNSORTED.equals(expectedBatch.getSampleCategoryId()) + PmfmId2.SORTED_UNSORTED.getValue().equals(expectedBatch.getSampleCategoryId()) || actualBatch.getSpecies() != null)) { assertNotNull(actualBatch.getSpecies()); assertEquals(expectedBatch.getSpecies().getId(), actualBatch.getSpecies().getId()); Modified: trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceReadTest.java =================================================================== --- trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceReadTest.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceReadTest.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -25,6 +25,7 @@ */ import com.google.common.collect.Maps; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; import fr.ifremer.tutti.persistence.entities.data.BatchContainer; import fr.ifremer.tutti.persistence.entities.data.FishingOperation; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatch; @@ -62,11 +63,8 @@ protected FishingOperation fishingOperation; - protected TuttiEnumerationFile enumerationFile; - @Before public void setUp() throws Exception { - enumerationFile = TuttiPersistenceServiceLocator.getTechnicalPersistenceService().getEnumerationFile(); service = TuttiPersistenceServiceLocator.getSpeciesBatchPersistenceService(); fishingOperationService = TuttiPersistenceServiceLocator.getFishingOperationPersistenceService(); @@ -124,7 +122,7 @@ // Check species only if Vrac/HorsVrac or if batch has been load throw getAllxxx method // (Because getSpeciesBatch(id) could not always retrieve the species) if (expectedBatch.getSpecies() != null && ( - enumerationFile.PMFM_ID_SORTED_UNSORTED.equals(expectedBatch.getSampleCategoryId()) + PmfmId2.SORTED_UNSORTED.getValue().equals(expectedBatch.getSampleCategoryId()) || actualBatch.getSpecies() != null)) { assertNotNull(actualBatch.getSpecies()); assertEquals(expectedBatch.getSpecies().getId(), actualBatch.getSpecies().getId()); Modified: trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceWriteTest.java =================================================================== --- trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceWriteTest.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceWriteTest.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -26,6 +26,7 @@ import com.google.common.collect.Lists; import com.google.common.collect.Maps; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; import fr.ifremer.tutti.persistence.entities.data.BatchContainer; import fr.ifremer.tutti.persistence.entities.data.CatchBatch; import fr.ifremer.tutti.persistence.entities.data.CatchBatchs; @@ -105,8 +106,6 @@ protected Caracteristic frequencyPMFM; - protected TuttiEnumerationFile enumerationFile; - @Before public void setUp() throws Exception { @@ -116,7 +115,6 @@ CatchBatchPersistenceService catchBatchService = TuttiPersistenceServiceLocator.getCatchBatchPersistenceService(); FishingOperationPersistenceService fishingOperationService = TuttiPersistenceServiceLocator.getFishingOperationPersistenceService(); ReferentialPersistenceService referentialService = TuttiPersistenceServiceLocator.getReferentialPersistenceService(); - enumerationFile = TuttiPersistenceServiceLocator.getTechnicalPersistenceService().getEnumerationFile(); species = referentialService.getAllSpecies(); assertNotNull(species); @@ -213,7 +211,7 @@ batch.setParentBatch(null); batch.setFishingOperation(fishingOperationNoCatchBatch); batch.setSpecies(taxon1); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_SORTED_UNSORTED); + batch.setSampleCategoryId(PmfmId2.SORTED_UNSORTED.getValue()); batch.setSampleCategoryValue(vracQualitativeValue); batch.setSampleCategoryWeight(5f); @@ -231,7 +229,7 @@ batch.setParentBatch(esp1Batch); batch.setSpecies(taxon1); batch.setComment("ESP1 - Vrac/5 Male/2 ss-ech/1 Nombre/7"); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_SEX); + batch.setSampleCategoryId(PmfmId2.SEX.getValue()); batch.setSampleCategoryValue(maleQualitativeValue); batch.setSampleCategoryWeight(2f); batch.setWeight(1f); @@ -248,7 +246,7 @@ batch.setParentBatch(esp1Batch); batch.setSpecies(taxon1); batch.setComment("ESP1 - Vrac/5 Female/3 Nombre/14"); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_SEX); + batch.setSampleCategoryId(PmfmId2.SEX.getValue()); batch.setSampleCategoryValue(femaleQualitativeValue); batch.setSampleCategoryWeight(3f); batch.setWeight(null); @@ -264,7 +262,7 @@ batch = SpeciesBatchs.newSpeciesBatch(); batch.setParentBatch(null); batch.setSpecies(taxon2); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_SORTED_UNSORTED); + batch.setSampleCategoryId(PmfmId2.SORTED_UNSORTED.getValue()); batch.setSampleCategoryValue(vracQualitativeValue); batch.setSampleCategoryWeight(7f); @@ -277,7 +275,7 @@ batch.setParentBatch(esp2Batch); batch.setSpecies(taxon2); batch.setComment("ESP2 - Vrac/7 UNK/2 ss-ech/1 Nombre/11"); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_MATURITY); + batch.setSampleCategoryId(PmfmId2.MATURITY.getValue()); batch.setSampleCategoryValue(firstMaturityQualitativeValue); batch.setSampleCategoryWeight(2f); batch.setWeight(1f); @@ -290,7 +288,7 @@ // ----------------------------------------------------------------------------- // Batch : ESP2 - Vrac/7 UNK/1.75 ss-ech/1.11 Nombre/99 batch.setComment("ESP2 - Vrac/7 UNK/1.75 ss-ech/1.11 Nombre/99"); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_SEX); + batch.setSampleCategoryId(PmfmId2.SEX.getValue()); batch.setSampleCategoryValue(unkQualitativeValue); batch.setSampleCategoryWeight(1.75f); batch.setWeight(1.11f); @@ -318,7 +316,7 @@ // ----------------------------------------------------------------------------- // 7. Test get all root species // ----------------------------------------------------------------------------- - BatchContainer<SpeciesBatch> rootSpeciesBatc = service.getRootSpeciesBatch(fishingOperationWithEmptyBatch.getId(),false ); + BatchContainer<SpeciesBatch> rootSpeciesBatc = service.getRootSpeciesBatch(fishingOperationWithEmptyBatch.getId(), false); List<SpeciesBatch> rootSpeciesBatch = rootSpeciesBatc.getChildren(); assertNotNull(rootSpeciesBatch); assertEquals(2, rootSpeciesBatch.size()); @@ -377,7 +375,7 @@ batch.setParentBatch(null); batch.setFishingOperation(fishingOperationWithEmptyBatch); batch.setSpecies(taxon1); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_SORTED_UNSORTED); + batch.setSampleCategoryId(PmfmId2.SORTED_UNSORTED.getValue()); batch.setSampleCategoryValue(vracQualitativeValue); batch.setSampleCategoryWeight(5f); assertCreateAndReloadSpeciesBatch(batch, null); @@ -388,7 +386,7 @@ batch.setParentBatch(esp1Batch); batch.setFishingOperation(fishingOperationWithEmptyBatch); batch.setSpecies(taxon1); - batch.setSampleCategoryId(enumerationFile.PMFM_ID_SEX); + batch.setSampleCategoryId(PmfmId2.SEX.getValue()); batch.setSampleCategoryValue(maleQualitativeValue); batch.setSampleCategoryWeight(2f); assertCreateAndReloadSpeciesBatch(batch, esp1Batch.getId()); @@ -451,7 +449,7 @@ // Check species only if Vrac/HorsVrac or if batch has been load throw getAllxxx method // (Because getSpeciesBatch(id) could not always retrieve the species) if (expectedBatch.getSpecies() != null && ( - enumerationFile.PMFM_ID_SORTED_UNSORTED.equals(expectedBatch.getSampleCategoryId()) + PmfmId2.SORTED_UNSORTED.getValue().equals(expectedBatch.getSampleCategoryId()) || actualBatch.getSpecies() != null)) { assertNotNull(actualBatch.getSpecies()); assertEquals(expectedBatch.getSpecies().getId(), actualBatch.getSpecies().getId()); Deleted: trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFileTest.java =================================================================== --- trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFileTest.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFileTest.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -1,53 +0,0 @@ -package fr.ifremer.tutti.persistence.service; - -/* - * #%L - * Tutti :: Persistence API - * $Id$ - * $HeadURL$ - * %% - * Copyright (C) 2012 - 2013 Ifremer - * %% - * This program is free software: you can redistribute it and/or modify - * it under the terms of the GNU General Public License as - * published by the Free Software Foundation, either version 3 of the - * License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public - * License along with this program. If not, see - * <http://www.gnu.org/licenses/gpl-3.0.html>. - * #L% - */ - -import fr.ifremer.tutti.persistence.test.DatabaseResource; -import org.junit.Assert; -import org.junit.ClassRule; -import org.junit.Test; - -/** - * This test load the {@link TuttiEnumerationFile} via Spring and then - * validates that we miss not constant. - * - * @author tchemit <chemit(a)codelutin.com> - * @see TuttiEnumerationFile#init() - * @since 1.0 - */ -public class TuttiEnumerationFileTest { - - @ClassRule - public static final DatabaseResource dbResource = DatabaseResource.noDb(); - - @Test - public void init() { - - TuttiEnumerationFile file = - TuttiPersistenceServiceLocator.getTuttiEnumerationFile(); - Assert.assertNotNull(file); - } - -} Modified: trunk/tutti-service/pom.xml =================================================================== --- trunk/tutti-service/pom.xml 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-service/pom.xml 2014-04-24 10:17:09 UTC (rev 1725) @@ -48,6 +48,12 @@ <version>${project.version}</version> </dependency> +  + <dependency> + <groupId>fr.ifremer.adagio</groupId> + <artifactId>adagio-core-allegro</artifactId> + </dependency> +  <dependency> <groupId>org.nuiton.jaxx</groupId> Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/PersistenceService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/PersistenceService.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/PersistenceService.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -30,6 +30,7 @@ import com.google.common.collect.Lists; import com.google.common.collect.Maps; import com.google.common.collect.Multimap; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.TuttiConfiguration; import fr.ifremer.tutti.persistence.InvalidBatchModelException; import fr.ifremer.tutti.persistence.TuttiPersistence; @@ -37,7 +38,6 @@ import fr.ifremer.tutti.persistence.entities.CaracteristicMap; import fr.ifremer.tutti.persistence.entities.TuttiEntities; import fr.ifremer.tutti.persistence.entities.data.AccidentalBatch; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.BatchContainer; import fr.ifremer.tutti.persistence.entities.data.BenthosBatch; @@ -62,7 +62,6 @@ import fr.ifremer.tutti.persistence.entities.referential.TuttiLocation; import fr.ifremer.tutti.persistence.entities.referential.TuttiReferentialEntity; import fr.ifremer.tutti.persistence.entities.referential.Vessel; -import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; import fr.ifremer.tutti.persistence.service.TuttiPersistenceServiceLocator; import org.apache.commons.collections.CollectionUtils; import org.apache.commons.io.IOUtils; @@ -190,11 +189,6 @@ } @Override - public TuttiEnumerationFile getEnumerationFile() { - return driver.getEnumerationFile(); - } - - @Override public <V> V invoke(Callable<V> call) { return driver.invoke(call); } @@ -219,11 +213,6 @@ driver.sanityDb(); } - @Override - public void clearCache(String cacheName) { - driver.clearCache(cacheName); - } - public static final DateFormat EXPORT_DATE_FORMAT = new SimpleDateFormat("yyyy-MM-dd"); public static final String EXPORT_DIRECTORY_FORMAT = "tutti-%s-%s"; @@ -950,7 +939,7 @@ //------------------------------------------------------------------------// @Override - public List<Attachment> getAllAttachments(AttachementObjectTypeEnum objectType, + public List<Attachment> getAllAttachments(ObjectTypeCode2 objectType, Integer objectId) { return driver.getAllAttachments(objectType, objectId); } @@ -976,7 +965,7 @@ } @Override - public void deleteAllAttachment(AttachementObjectTypeEnum objectType, Integer... objectIds) { + public void deleteAllAttachment(ObjectTypeCode2 objectType, Integer... objectIds) { driver.deleteAllAttachment(objectType, objectIds); } Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostExportService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostExportService.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostExportService.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -27,9 +27,9 @@ import com.google.common.collect.Lists; import com.google.common.collect.Maps; import com.google.common.io.Files; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.CaracteristicMap; import fr.ifremer.tutti.persistence.entities.data.AccidentalBatch; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.BatchContainer; import fr.ifremer.tutti.persistence.entities.data.BenthosBatch; @@ -246,7 +246,7 @@ addAttachments(id, batch.getIdAsInt(), - AttachementObjectTypeEnum.BATCH, + ObjectTypeCode2.BATCH, attachmentRows); } @@ -331,7 +331,7 @@ caracteristicRows.add(caracteristicRow); } - addAttachments(id, batch.getIdAsInt(), AttachementObjectTypeEnum.SAMPLE, attachmentRows); + addAttachments(id, batch.getIdAsInt(), ObjectTypeCode2.SAMPLE, attachmentRows); } File directory = Files.createTempDir(); @@ -420,7 +420,7 @@ caracteristicRows.add(caracteristicRow); } - addAttachments(id, batch.getIdAsInt(), AttachementObjectTypeEnum.SAMPLE, attachmentRows); + addAttachments(id, batch.getIdAsInt(), ObjectTypeCode2.SAMPLE, attachmentRows); } // export accidental catches @@ -538,7 +538,7 @@ rows.add(row); addFrequencies(id, batch.getId(), frequencyRows); - addAttachments(id, batch.getIdAsInt(), AttachementObjectTypeEnum.BATCH, attachmentRows); + addAttachments(id, batch.getIdAsInt(), ObjectTypeCode2.BATCH, attachmentRows); for (SpeciesBatch child : batch.getChildBatchs()) { createSpeciesRow(child, id, rows, frequencyRows, attachmentRows); @@ -568,7 +568,7 @@ rows.add(row); addFrequencies(id, batch.getId(), frequencyRows); - addAttachments(id, batch.getIdAsInt(), AttachementObjectTypeEnum.BATCH, attachmentRows); + addAttachments(id, batch.getIdAsInt(), ObjectTypeCode2.BATCH, attachmentRows); for (BenthosBatch child : batch.getChildBatchs()) { createBenthosRow(child, id, rows, frequencyRows, attachmentRows); @@ -600,7 +600,7 @@ protected void addAttachments(String batchId, int objectId, - AttachementObjectTypeEnum objectType, + ObjectTypeCode2 objectType, List<AttachmentRow> attachmentRows) { List<Attachment> attachments = persistenceService.getAllAttachments(objectType, objectId); Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostImportService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostImportService.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostImportService.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -29,14 +29,12 @@ import com.google.common.collect.ArrayListMultimap; import com.google.common.collect.ListMultimap; import com.google.common.collect.Maps; -import org.nuiton.jaxx.application.ApplicationBusinessException; -import org.nuiton.jaxx.application.ApplicationIOUtil; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.CaracteristicMap; import fr.ifremer.tutti.persistence.entities.TuttiEntities; import fr.ifremer.tutti.persistence.entities.TuttiEntity; import fr.ifremer.tutti.persistence.entities.data.AccidentalBatch; import fr.ifremer.tutti.persistence.entities.data.AccidentalBatchs; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.Attachments; import fr.ifremer.tutti.persistence.entities.data.BatchContainer; @@ -70,6 +68,8 @@ import org.apache.commons.lang3.StringUtils; import org.apache.commons.lang3.tuple.Pair; import org.nuiton.csv.Import; +import org.nuiton.jaxx.application.ApplicationBusinessException; +import org.nuiton.jaxx.application.ApplicationIOUtil; import java.io.File; import java.io.Reader; @@ -81,8 +81,8 @@ import java.util.Map; import java.util.concurrent.Callable; +import static org.nuiton.i18n.I18n.n; import static org.nuiton.i18n.I18n.t; -import static org.nuiton.i18n.I18n.n; /** * Service to export batches from a satellite post or import batches @@ -211,7 +211,7 @@ importAttachments(tempDir, batches, notImportedBatches, - AttachementObjectTypeEnum.BATCH); + ObjectTypeCode2.BATCH); // Import weights @@ -477,7 +477,7 @@ importAttachments(tempDir, batches, notImportedBatches, - AttachementObjectTypeEnum.BATCH); + ObjectTypeCode2.BATCH); // Import weights @@ -736,7 +736,7 @@ importAttachments(tempDir, batches, notImportedBatches, - AttachementObjectTypeEnum.BATCH); + ObjectTypeCode2.BATCH); // Import weights @@ -904,7 +904,7 @@ // Import attachments - importAttachments(tempDir, batches, AttachementObjectTypeEnum.SAMPLE); + importAttachments(tempDir, batches, ObjectTypeCode2.SAMPLE); return null; } }; @@ -1061,7 +1061,7 @@ // Import attachments - importAttachments(tempDir, batches, AttachementObjectTypeEnum.SAMPLE); + importAttachments(tempDir, batches, ObjectTypeCode2.SAMPLE); return null; } }; @@ -1214,7 +1214,8 @@ throw new ApplicationBusinessException(t("tutti.service.multipost.import.wrongOperation.error", decoratorService.getDecoratorByType(FishingOperation.class) - .toString(operation))); + .toString(operation) + )); } } } finally { @@ -1228,7 +1229,7 @@ protected <R extends TuttiEntity> void importAttachments(File directory, final Map<String, R> data, final Map<String, R> notImportedData, - AttachementObjectTypeEnum objectType) { + ObjectTypeCode2 objectType) { Function<AttachmentRow, Integer> getObjetcIdFunction = new Function<AttachmentRow, Integer>() { @Override @@ -1292,7 +1293,7 @@ protected <R extends TuttiEntity> void importAttachments(File directory, final Map<String, R> data, - AttachementObjectTypeEnum objectType) { + ObjectTypeCode2 objectType) { Function<AttachmentRow, Integer> getObjetcIdFunction = new Function<AttachmentRow, Integer>() { @Override Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ProtocolImportExportService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ProtocolImportExportService.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/protocol/ProtocolImportExportService.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -38,7 +38,6 @@ import fr.ifremer.tutti.persistence.entities.protocol.TuttiProtocols; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.persistence.entities.referential.Species; -import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; import fr.ifremer.tutti.service.AbstractTuttiService; import fr.ifremer.tutti.service.PersistenceService; import fr.ifremer.tutti.service.TuttiServiceContext; @@ -75,21 +74,12 @@ private static final Log log = LogFactory.getLog(ProtocolImportExportService.class); - protected TuttiEnumerationFile enumerationFile; - - @Override - public void setServiceContext(TuttiServiceContext context) { - super.setServiceContext(context); - PersistenceService service = getService(PersistenceService.class); - enumerationFile = service.getEnumerationFile(); - } - public void exportProtocol(TuttiProtocol protocol, File file) { TuttiProtocols.toFile(protocol, file); } public TuttiProtocol importProtocol(File file) { - TuttiProtocol result = TuttiProtocols.fromFile(enumerationFile, file); + TuttiProtocol result = TuttiProtocols.fromFile(file); return result; } Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/psionimport/PsionImportService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/psionimport/PsionImportService.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/psionimport/PsionImportService.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -31,8 +31,11 @@ import com.google.common.collect.Maps; import com.google.common.collect.Sets; import com.google.common.io.Files; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueId; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueId2; import fr.ifremer.tutti.persistence.entities.TuttiEntities; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.Attachments; import fr.ifremer.tutti.persistence.entities.data.BatchContainer; @@ -48,7 +51,6 @@ import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; import fr.ifremer.tutti.persistence.entities.referential.Species; -import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; import fr.ifremer.tutti.service.AbstractTuttiService; import fr.ifremer.tutti.service.PersistenceService; import fr.ifremer.tutti.service.TuttiServiceContext; @@ -111,8 +113,6 @@ protected PersistenceService persistenceService; - protected TuttiEnumerationFile enumerationFile; - protected CaracteristicQualitativeValue sortedCaracteristic; protected CaracteristicQualitativeValue unsortedCaracteristic; @@ -128,14 +128,12 @@ super.setServiceContext(context); persistenceService = getService(PersistenceService.class); - enumerationFile = persistenceService.getEnumerationFile(); - { // sorted/unsorted caracteristic Caracteristic caracteristic = persistenceService.getSortedUnsortedCaracteristic(); - sortedCaracteristic = TuttiEntities.getQualitativeValue(caracteristic, enumerationFile.QUALITATIVE_VRAC_ID); - unsortedCaracteristic = TuttiEntities.getQualitativeValue(caracteristic, enumerationFile.QUALITATIVE_HORS_VRAC_ID); + sortedCaracteristic = TuttiEntities.getQualitativeValue(caracteristic, QualitativeValueId.SORTED_VRAC.getValue()); + unsortedCaracteristic = TuttiEntities.getQualitativeValue(caracteristic, QualitativeValueId.SORTED_HORS_VRAC.getValue()); } { // sex caracteristic @@ -147,13 +145,13 @@ List<CaracteristicQualitativeValue> qualitativeValues = caracteristic.getQualitativeValue(); Map<Integer, CaracteristicQualitativeValue> sexById = TuttiEntities.splitByIdAsInt(qualitativeValues); - CaracteristicQualitativeValue femaleCaracteristic = sexById.get(enumerationFile.QUALITATIVE_SEX_FEMALE_ID); + CaracteristicQualitativeValue femaleCaracteristic = sexById.get(QualitativeValueId.SEX_FEMALE.getValue()); sexCaracteristicValues.put("F", femaleCaracteristic); sexCaracteristicValues.put("f", femaleCaracteristic); - CaracteristicQualitativeValue maleCaracteristic = sexById.get(enumerationFile.QUALITATIVE_SEX_MALE_ID); + CaracteristicQualitativeValue maleCaracteristic = sexById.get(QualitativeValueId.SEX_MALE.getValue()); sexCaracteristicValues.put("M", maleCaracteristic); sexCaracteristicValues.put("m", maleCaracteristic); - CaracteristicQualitativeValue unkownCaracteristic = sexById.get(enumerationFile.QUALITATIVE_SEX_UNDEFINED_ID); + CaracteristicQualitativeValue unkownCaracteristic = sexById.get(QualitativeValueId2.SEX_UNDEFINED.getValue()); sexCaracteristicValues.put("I", unkownCaracteristic); sexCaracteristicValues.put("i", unkownCaracteristic); } @@ -167,11 +165,11 @@ List<CaracteristicQualitativeValue> qualitativeValues = caracteristic.getQualitativeValue(); Map<Integer, CaracteristicQualitativeValue> byIds = TuttiEntities.splitByIdAsInt(qualitativeValues); - maturityCaracteristicValues.put("1", byIds.get(enumerationFile.QUALITATIVE_MATURITY_1_ID)); - maturityCaracteristicValues.put("2", byIds.get(enumerationFile.QUALITATIVE_MATURITY_2_ID)); - maturityCaracteristicValues.put("3", byIds.get(enumerationFile.QUALITATIVE_MATURITY_3_ID)); - maturityCaracteristicValues.put("4", byIds.get(enumerationFile.QUALITATIVE_MATURITY_4_ID)); - maturityCaracteristicValues.put("5", byIds.get(enumerationFile.QUALITATIVE_MATURITY_5_ID)); + maturityCaracteristicValues.put("1", byIds.get(QualitativeValueId2.MATURITY_1.getValue())); + maturityCaracteristicValues.put("2", byIds.get(QualitativeValueId2.MATURITY_2.getValue())); + maturityCaracteristicValues.put("3", byIds.get(QualitativeValueId2.MATURITY_3.getValue())); + maturityCaracteristicValues.put("4", byIds.get(QualitativeValueId2.MATURITY_4.getValue())); + maturityCaracteristicValues.put("5", byIds.get(QualitativeValueId2.MATURITY_5.getValue())); } } @@ -492,8 +490,6 @@ // insert all imported species batches - TuttiEnumerationFile enumerationFile = persistenceService.getEnumerationFile(); - Set<Species> species = importModel.getSpecies(); for (Species specy : species) { @@ -509,7 +505,7 @@ batchModel.getSpecies(), batchModel.getWeight(), batchModel.getSampleWeight(), - enumerationFile.PMFM_ID_SORTED_UNSORTED, + PmfmId2.SORTED_UNSORTED.getValue(), sortedCaracteristic); batch = persistenceService.createSpeciesBatch(batch, null); @@ -524,7 +520,7 @@ specy, null, null, - enumerationFile.PMFM_ID_SORTED_UNSORTED, + PmfmId2.SORTED_UNSORTED.getValue(), sortedCaracteristic); rootBatch = persistenceService.createSpeciesBatch(rootBatch, null); @@ -610,7 +606,7 @@ if (SEX_VALUES.contains(categoryCode)) { // sex caracteristic - caracteristicId = enumerationFile.PMFM_ID_SEX; + caracteristicId = PmfmId2.SEX.getValue(); caracteristicQualitativeValue = sexCaracteristicValues.get(categoryCode); result = new PsionImportBatchModel.SampleCategory(caracteristicId, caracteristicQualitativeValue); @@ -618,7 +614,7 @@ } else if (MATURITY_VALUES.contains(categoryCode)) { // maturity caracteristic - caracteristicId = enumerationFile.PMFM_ID_MATURITY; + caracteristicId = PmfmId2.MATURITY.getValue(); caracteristicQualitativeValue = maturityCaracteristicValues.get(categoryCode); result = new PsionImportBatchModel.SampleCategory(caracteristicId, caracteristicQualitativeValue); @@ -677,7 +673,7 @@ protected void addFileAsAttachment(File f, CatchBatch catchBatch) { Attachment attachment = Attachments.newAttachment(); - attachment.setObjectType(AttachementObjectTypeEnum.CATCH_BATCH); + attachment.setObjectType(ObjectTypeCode2.CATCH_BATCH); attachment.setObjectId(Integer.valueOf(catchBatch.getId())); attachment.setName(f.getName()); String date = DateFormat.getDateTimeInstance().format(context.currentDate()); Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriCatch.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriCatch.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriCatch.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -25,11 +25,13 @@ */ import com.google.common.collect.Maps; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueId; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueId2; import fr.ifremer.tutti.persistence.entities.TuttiEntities; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; import fr.ifremer.tutti.persistence.entities.referential.Species; -import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; import org.apache.commons.lang3.mutable.MutableFloat; import java.io.Serializable; @@ -46,68 +48,68 @@ public static enum Signs { DEFAULT("0") { @Override - public Integer getCategory(TuttiEnumerationFile enumerationFile) { - return enumerationFile.PMFM_ID_SEX; + public Integer getCategory() { + return PmfmId2.SEX.getValue(); } @Override - public Integer getQualitativeValueId(TuttiEnumerationFile enumerationFile) { - return enumerationFile.QUALITATIVE_SEX_UNDEFINED_ID; + public Integer getQualitativeValueId() { + return QualitativeValueId2.SEX_UNDEFINED.getValue(); } }, MALE("1") { @Override - public Integer getCategory(TuttiEnumerationFile enumerationFile) { - return enumerationFile.PMFM_ID_SEX; + public Integer getCategory() { + return PmfmId2.SEX.getValue(); } @Override - public Integer getQualitativeValueId(TuttiEnumerationFile enumerationFile) { - return enumerationFile.QUALITATIVE_SEX_MALE_ID; + public Integer getQualitativeValueId() { + return QualitativeValueId.SEX_MALE.getValue(); } }, FEMALE("2") { @Override - public Integer getCategory(TuttiEnumerationFile enumerationFile) { - return enumerationFile.PMFM_ID_SEX; + public Integer getCategory() { + return PmfmId2.SEX.getValue(); } @Override - public Integer getQualitativeValueId(TuttiEnumerationFile enumerationFile) { - return enumerationFile.QUALITATIVE_SEX_FEMALE_ID; + public Integer getQualitativeValueId() { + return QualitativeValueId.SEX_FEMALE.getValue(); } }, SMALL("P") { @Override - public Integer getCategory(TuttiEnumerationFile enumerationFile) { - return enumerationFile.PMFM_ID_SIZE_CATEGORY; + public Integer getCategory() { + return PmfmId2.SIZE_CATEGORY.getValue(); } @Override - public Integer getQualitativeValueId(TuttiEnumerationFile enumerationFile) { - return enumerationFile.QUALITATIVE_SIZE_SMALL_ID; + public Integer getQualitativeValueId() { + return QualitativeValueId.SIZE_SMALL.getValue(); } }, MEDIUM("M") { @Override - public Integer getCategory(TuttiEnumerationFile enumerationFile) { - return enumerationFile.PMFM_ID_SIZE_CATEGORY; + public Integer getCategory() { + return PmfmId2.SIZE_CATEGORY.getValue(); } @Override - public Integer getQualitativeValueId(TuttiEnumerationFile enumerationFile) { - return enumerationFile.QUALITATIVE_SIZE_MEDIUM_ID; + public Integer getQualitativeValueId() { + return QualitativeValueId.SIZE_MEDIUM.getValue(); } }, BIG("G") { @Override - public Integer getCategory(TuttiEnumerationFile enumerationFile) { - return enumerationFile.PMFM_ID_SIZE_CATEGORY; + public Integer getCategory() { + return PmfmId2.SIZE_CATEGORY.getValue(); } @Override - public Integer getQualitativeValueId(TuttiEnumerationFile enumerationFile) { - return enumerationFile.QUALITATIVE_SIZE_BIG_ID; + public Integer getQualitativeValueId() { + return QualitativeValueId.SIZE_BIG.getValue(); } }; @@ -128,14 +130,13 @@ return result; } - public abstract Integer getCategory(TuttiEnumerationFile enumerationFile); + public abstract Integer getCategory(); - public abstract Integer getQualitativeValueId(TuttiEnumerationFile enumerationFile); + public abstract Integer getQualitativeValueId(); - public void registerSign(TuttiEnumerationFile enumerationFile, - Caracteristic caracteristic, + public void registerSign(Caracteristic caracteristic, Map<Signs, CaracteristicQualitativeValue> map) { - Integer valueId = getQualitativeValueId(enumerationFile); + Integer valueId = getQualitativeValueId(); CaracteristicQualitativeValue result = TuttiEntities.getQualitativeValue(caracteristic, valueId); map.put(this, result); } Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriImportExportService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriImportExportService.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriImportExportService.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -32,8 +32,10 @@ import com.google.common.collect.Maps; import com.google.common.collect.Multimaps; import com.google.common.collect.Sets; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueId; import fr.ifremer.tutti.persistence.entities.TuttiEntities; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.Attachments; import fr.ifremer.tutti.persistence.entities.data.BatchContainer; @@ -44,7 +46,6 @@ import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; import fr.ifremer.tutti.persistence.entities.referential.Species; -import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; import fr.ifremer.tutti.service.AbstractTuttiService; import fr.ifremer.tutti.service.DecoratorService; import fr.ifremer.tutti.service.PersistenceService; @@ -105,32 +106,29 @@ decoratorService = getService(DecoratorService.class); dataContext = context.getDataContext(); - TuttiEnumerationFile enumerationFile = - persistenceService.getEnumerationFile(); - signsToCaracteristicValue = Maps.newEnumMap(PupitriCatch.Signs.class); { // sorted/unsorted caracteristic Caracteristic caracteristic = persistenceService.getSortedUnsortedCaracteristic(); - sortedCaracteristic = TuttiEntities.getQualitativeValue(caracteristic, enumerationFile.QUALITATIVE_VRAC_ID); - unsortedCaracteristic = TuttiEntities.getQualitativeValue(caracteristic, enumerationFile.QUALITATIVE_HORS_VRAC_ID); + sortedCaracteristic = TuttiEntities.getQualitativeValue(caracteristic, QualitativeValueId.SORTED_VRAC.getValue()); + unsortedCaracteristic = TuttiEntities.getQualitativeValue(caracteristic, QualitativeValueId.SORTED_HORS_VRAC.getValue()); } { // sex category Caracteristic caracteristic = persistenceService.getSexCaracteristic(); - PupitriCatch.Signs.DEFAULT.registerSign(enumerationFile, caracteristic, signsToCaracteristicValue); - PupitriCatch.Signs.FEMALE.registerSign(enumerationFile, caracteristic, signsToCaracteristicValue); - PupitriCatch.Signs.MALE.registerSign(enumerationFile, caracteristic, signsToCaracteristicValue); + PupitriCatch.Signs.DEFAULT.registerSign(caracteristic, signsToCaracteristicValue); + PupitriCatch.Signs.FEMALE.registerSign(caracteristic, signsToCaracteristicValue); + PupitriCatch.Signs.MALE.registerSign(caracteristic, signsToCaracteristicValue); } { // size category Caracteristic caracteristic = persistenceService.getSizeCategoryCaracteristic(); - PupitriCatch.Signs.SMALL.registerSign(enumerationFile, caracteristic, signsToCaracteristicValue); - PupitriCatch.Signs.MEDIUM.registerSign(enumerationFile, caracteristic, signsToCaracteristicValue); - PupitriCatch.Signs.BIG.registerSign(enumerationFile, caracteristic, signsToCaracteristicValue); + PupitriCatch.Signs.SMALL.registerSign(caracteristic, signsToCaracteristicValue); + PupitriCatch.Signs.MEDIUM.registerSign(caracteristic, signsToCaracteristicValue); + PupitriCatch.Signs.BIG.registerSign(caracteristic, signsToCaracteristicValue); } } @@ -194,7 +192,7 @@ protected void addFileAsAttachment(File f, CatchBatch catchBatch) { Attachment attachment = Attachments.newAttachment(); - attachment.setObjectType(AttachementObjectTypeEnum.CATCH_BATCH); + attachment.setObjectType(ObjectTypeCode2.CATCH_BATCH); attachment.setObjectId(Integer.valueOf(catchBatch.getId())); attachment.setName(f.getName()); String date = DateFormat.getDateTimeInstance().format(context.currentDate()); @@ -391,7 +389,6 @@ // insert all imported species batches - TuttiEnumerationFile enumerationFile = persistenceService.getEnumerationFile(); Decorator<Species> speciesDecorator = decoratorService.getDecoratorByType(Species.class); for (PupitriCatch pupitriCatch : result.getCatches()) { @@ -413,7 +410,7 @@ SpeciesBatch batch = createSpeciesBatch(operation, species, null, - enumerationFile.PMFM_ID_SORTED_UNSORTED, + PmfmId2.SORTED_UNSORTED.getValue(), cqv); batch = persistenceService.createSpeciesBatch(batch, null); @@ -425,7 +422,7 @@ PupitriCatch.Signs signs = entry.getKey(); float catchWeight = entry.getValue().floatValue(); - Integer categoryId = signs.getCategory(enumerationFile); + Integer categoryId = signs.getCategory(); CaracteristicQualitativeValue splitCqv = signsToCaracteristicValue.get(signs); SpeciesBatch childBatch = createSpeciesBatch( operation, @@ -453,7 +450,7 @@ SpeciesBatch batch = createSpeciesBatch(operation, species, totalWeight, - enumerationFile.PMFM_ID_SORTED_UNSORTED, + PmfmId2.SORTED_UNSORTED.getValue(), cqv); persistenceService.createSpeciesBatch(batch, null); Modified: trunk/tutti-ui-swing/pom.xml =================================================================== --- trunk/tutti-ui-swing/pom.xml 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/pom.xml 2014-04-24 10:17:09 UTC (rev 1725) @@ -111,6 +111,16 @@ <version>${project.version}</version> </dependency> +  + <dependency> + <groupId>fr.ifremer.adagio</groupId> + <artifactId>adagio-core-shared</artifactId> + </dependency> + <dependency> + <groupId>fr.ifremer.adagio</groupId> + <artifactId>adagio-core-allegro</artifactId> + </dependency> +  <dependency> <groupId>org.nuiton</groupId> Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/action/ImportPupitriAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/action/ImportPupitriAction.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/action/ImportPupitriAction.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -26,10 +26,11 @@ import com.google.common.base.Joiner; import com.google.common.collect.Lists; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; import fr.ifremer.tutti.persistence.entities.data.CatchBatch; import fr.ifremer.tutti.persistence.entities.data.FishingOperation; import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; -import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; import fr.ifremer.tutti.service.PersistenceService; import fr.ifremer.tutti.service.pupitri.PupitriImportExportService; import fr.ifremer.tutti.service.pupitri.PupitriImportResult; @@ -89,14 +90,13 @@ // must check that sample category model is compatible for pupitri import // means need some categories - TuttiEnumerationFile enumerationFile = persistenceService.getEnumerationFile(); SampleCategoryModel sampleCategoryModel = getDataContext().getSampleCategoryModel(); List<String> missingCategories = Lists.newArrayList(); - if (!sampleCategoryModel.containsCategoryId(enumerationFile.PMFM_ID_SIZE_CATEGORY)) { + if (!sampleCategoryModel.containsCategoryId(PmfmId2.SIZE_CATEGORY.getValue())) { missingCategories.add("<li>" + persistenceService.getSizeCategoryCaracteristic().getParameterName() + "</li>"); } - if (!sampleCategoryModel.containsCategoryId(enumerationFile.PMFM_ID_SEX)) { + if (!sampleCategoryModel.containsCategoryId(PmfmId2.SEX.getValue())) { missingCategories.add("<li>" + persistenceService.getSexCaracteristic().getParameterName() + "</li>"); } if (!missingCategories.isEmpty()) { Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/category/EditSampleCategoryModelUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/category/EditSampleCategoryModelUIHandler.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/category/EditSampleCategoryModelUIHandler.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -228,7 +228,6 @@ getDataContext().getSampleCategoryModel(); EditSampleCategoryModelUIModel model = new EditSampleCategoryModelUIModel( - getPersistenceService().getEnumerationFile(), sampleCategoryModel.getCategory(), caracteristics); Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/category/EditSampleCategoryModelUIModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/category/EditSampleCategoryModelUIModel.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/category/EditSampleCategoryModelUIModel.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -26,10 +26,10 @@ import com.google.common.base.Preconditions; import com.google.common.collect.Lists; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmId2; import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModelEntry; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; -import fr.ifremer.tutti.persistence.service.TuttiEnumerationFile; import fr.ifremer.tutti.ui.swing.util.table.AbstractTuttiTableUIModel; import org.nuiton.util.beans.Binder; import org.nuiton.util.beans.BinderFactory; @@ -71,19 +71,17 @@ private boolean moveDownEntryEnabled; - public EditSampleCategoryModelUIModel(TuttiEnumerationFile enumerationFile, - List<SampleCategoryModelEntry> category, + public EditSampleCategoryModelUIModel(List<SampleCategoryModelEntry> category, List<Caracteristic> caracteristicList) { super(SampleCategoryModel.class, fromBeanBinder, toBeanBinder); Preconditions.checkNotNull(caracteristicList, "need a not null caracteristicList"); - Preconditions.checkNotNull(enumerationFile, "need a not null enumerationFile"); Preconditions.checkNotNull(category, "need a not null category list"); Preconditions.checkArgument(!category.isEmpty(), "need at least one first category (sorted-unsorted)"); this.caracteristicList = caracteristicList; this.firstCategory = category.get(0); - Preconditions.checkArgument(enumerationFile.PMFM_ID_SORTED_UNSORTED.equals(firstCategory.getCategoryId()), "first category must be sorted-unsorted caracteristic but was: " + firstCategory.getCategoryId()); + Preconditions.checkArgument(PmfmId2.SORTED_UNSORTED.getValue().equals(firstCategory.getCategoryId()), "first category must be sorted-unsorted caracteristic but was: " + firstCategory.getCategoryId()); List<EditSampleCategoryModelRowModel> rows = Lists.newArrayList(); Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIModel.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIModel.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -25,7 +25,7 @@ */ import com.google.common.collect.Lists; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.Cruise; import fr.ifremer.tutti.persistence.entities.data.Cruises; @@ -192,8 +192,8 @@ //------------------------------------------------------------------------// @Override - public AttachementObjectTypeEnum getObjectType() { - return AttachementObjectTypeEnum.SCIENTIFIC_CRUISE; + public ObjectTypeCode2 getObjectType() { + return ObjectTypeCode2.SCIENTIFIC_CRUISE; } @Override Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/ValidateCruiseUI.jaxx =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/ValidateCruiseUI.jaxx 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/ValidateCruiseUI.jaxx 2014-04-24 10:17:09 UTC (rev 1725) @@ -65,8 +65,7 @@ </JXTitledPanel> - <FishingOperationsUI id='operationPanel' - constructorParams='this'> + <FishingOperationsUI id='operationPanel' constructorParams='this'> </FishingOperationsUI> </JSplitPane> \ No newline at end of file Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/ValidateCruiseUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/ValidateCruiseUIHandler.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/ValidateCruiseUIHandler.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -248,7 +248,7 @@ } } - protected class OperationTreeNode extends DefaultMutableTreeNode { + protected static class OperationTreeNode extends DefaultMutableTreeNode { private static final long serialVersionUID = 1L; @@ -282,7 +282,7 @@ } } - protected class MessageTreeNode extends DefaultMutableTreeNode { + protected static class MessageTreeNode extends DefaultMutableTreeNode { private static final long serialVersionUID = 1L; Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/ValidateCruiseUIModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/ValidateCruiseUIModel.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/ValidateCruiseUIModel.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -48,10 +48,14 @@ public static final String PROPERTY_VALIDATOR = "validator"; + public static final String PROPERTY_CAN_SYNCH = "canSynch"; + protected FishingOperation selectedFishingOperation; protected Map<FishingOperation, NuitonValidatorResult> validator; + protected boolean canSynch; + public FishingOperation getSelectedFishingOperation() { return selectedFishingOperation; } @@ -71,4 +75,14 @@ this.validator = validator; firePropertyChange(PROPERTY_VALIDATOR, oldValue, validator); } + + public boolean isCanSynch() { + return canSynch; + } + + public void setCanSynch(boolean canSynch) { + Object oldValue = isCanSynch(); + this.canSynch = canSynch; + firePropertyChange(PROPERTY_CAN_SYNCH, oldValue, canSynch); + } } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIModel.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIModel.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -25,11 +25,9 @@ */ import com.google.common.collect.Lists; -import org.nuiton.jaxx.application.swing.tab.TabContentModel; -import fr.ifremer.tutti.type.CoordinateEditorType; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.CaracteristicMap; import fr.ifremer.tutti.persistence.entities.TuttiEntities; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.Cruise; import fr.ifremer.tutti.persistence.entities.data.FishingOperation; @@ -38,12 +36,14 @@ import fr.ifremer.tutti.persistence.entities.referential.Person; import fr.ifremer.tutti.persistence.entities.referential.TuttiLocation; import fr.ifremer.tutti.persistence.entities.referential.Vessel; +import fr.ifremer.tutti.type.CoordinateEditorType; import fr.ifremer.tutti.ui.swing.util.AbstractTuttiBeanUIModel; import fr.ifremer.tutti.ui.swing.util.attachment.AttachmentModelAware; import jaxx.runtime.swing.editor.gis.DmdCoordinate; import jaxx.runtime.swing.editor.gis.DmsCoordinate; import org.apache.commons.collections.CollectionUtils; import org.apache.commons.lang3.StringUtils; +import org.nuiton.jaxx.application.swing.tab.TabContentModel; import org.nuiton.util.DateUtil; import org.nuiton.util.beans.Binder; import org.nuiton.util.beans.BinderFactory; @@ -965,8 +965,8 @@ //------------------------------------------------------------------------// @Override - public AttachementObjectTypeEnum getObjectType() { - return AttachementObjectTypeEnum.OPERATION; + public ObjectTypeCode2 getObjectType() { + return ObjectTypeCode2.OPERATION; } @Override Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIModel.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIModel.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -28,7 +28,7 @@ import com.google.common.collect.HashMultimap; import com.google.common.collect.Lists; import com.google.common.collect.Multimap; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.CatchBatch; import fr.ifremer.tutti.persistence.entities.data.CatchBatchs; @@ -762,8 +762,8 @@ //------------------------------------------------------------------------// @Override - public AttachementObjectTypeEnum getObjectType() { - return AttachementObjectTypeEnum.CATCH_BATCH; + public ObjectTypeCode2 getObjectType() { + return ObjectTypeCode2.CATCH_BATCH; } @Override Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/accidental/AccidentalBatchRowModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/accidental/AccidentalBatchRowModel.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/accidental/AccidentalBatchRowModel.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -25,16 +25,16 @@ */ import com.google.common.collect.Lists; -import fr.ifremer.tutti.type.WeightUnit; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.CaracteristicMap; import fr.ifremer.tutti.persistence.entities.data.AccidentalBatch; import fr.ifremer.tutti.persistence.entities.data.AccidentalBatchs; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.FishingOperation; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; import fr.ifremer.tutti.persistence.entities.referential.Species; +import fr.ifremer.tutti.type.WeightUnit; import fr.ifremer.tutti.ui.swing.util.AbstractTuttiBeanUIModel; import fr.ifremer.tutti.ui.swing.util.attachment.AttachmentModelAware; import fr.ifremer.tutti.ui.swing.util.caracteristics.CaracteristicMapColumnRowModel; @@ -259,8 +259,8 @@ //------------------------------------------------------------------------// @Override - public AttachementObjectTypeEnum getObjectType() { - return AttachementObjectTypeEnum.SAMPLE; + public ObjectTypeCode2 getObjectType() { + return ObjectTypeCode2.SAMPLE; } @Override Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchRowModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchRowModel.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchRowModel.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -26,10 +26,8 @@ import com.google.common.base.Preconditions; import com.google.common.collect.Lists; -import fr.ifremer.tutti.ui.swing.util.computable.ComputableData; -import fr.ifremer.tutti.type.WeightUnit; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.TuttiEntities; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.BenthosBatch; import fr.ifremer.tutti.persistence.entities.data.BenthosBatchFrequency; @@ -39,12 +37,13 @@ import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModelEntry; import fr.ifremer.tutti.persistence.entities.referential.Species; +import fr.ifremer.tutti.type.WeightUnit; import fr.ifremer.tutti.ui.swing.content.operation.catches.SampleCategoryAble; import fr.ifremer.tutti.ui.swing.content.operation.catches.benthos.frequency.BenthosFrequencyRowModel; import fr.ifremer.tutti.ui.swing.util.AbstractTuttiBeanUIModel; import fr.ifremer.tutti.ui.swing.util.attachment.AttachmentModelAware; +import fr.ifremer.tutti.ui.swing.util.computable.ComputableData; import org.apache.commons.collections.CollectionUtils; -import org.apache.commons.lang3.ObjectUtils; import org.nuiton.util.beans.Binder; import org.nuiton.util.beans.BinderFactory; @@ -445,8 +444,8 @@ //------------------------------------------------------------------------// @Override - public AttachementObjectTypeEnum getObjectType() { - return AttachementObjectTypeEnum.BATCH; + public ObjectTypeCode2 getObjectType() { + return ObjectTypeCode2.BATCH; } @Override Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchUIHandler.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchUIHandler.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -27,6 +27,7 @@ import com.google.common.base.Preconditions; import com.google.common.collect.Lists; import com.google.common.collect.Sets; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueId; import fr.ifremer.tutti.ui.swing.util.computable.ComputableDataTableCell; import org.nuiton.jaxx.application.swing.table.ColumnIdentifier; import fr.ifremer.tutti.type.WeightUnit; @@ -674,8 +675,7 @@ super.beforeInit(ui); - qualitative_unsorted_id = - getContext().getPersistenceService().getEnumerationFile().QUALITATIVE_UNSORTED_ID; + qualitative_unsorted_id = QualitativeValueId.UNSORTED.getValue(); weightUnit = getConfig().getBenthosWeightUnit(); Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/create/CreateBenthosBatchUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/create/CreateBenthosBatchUIHandler.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/create/CreateBenthosBatchUIHandler.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -27,6 +27,7 @@ import com.google.common.base.Preconditions; import com.google.common.collect.Lists; import com.google.common.collect.Multimap; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueId; import org.nuiton.jaxx.application.swing.util.Cancelable; import fr.ifremer.tutti.type.WeightUnit; import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; @@ -174,7 +175,7 @@ SampleCategoryModelEntry caracteristic = sampleCategoryModel.getCategoryById(sampleCategoryModel.getFirstCategoryId()); - Integer vracId = getPersistenceService().getEnumerationFile().QUALITATIVE_VRAC_ID; + Integer vracId = QualitativeValueId.SORTED_VRAC.getValue(); CaracteristicQualitativeValue vracValue = null; for (CaracteristicQualitativeValue caracteristicQualitativeValue : caracteristic.getCaracteristic().getQualitativeValue()) { Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/individualobservation/IndividualObservationBatchRowModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/individualobservation/IndividualObservationBatchRowModel.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/individualobservation/IndividualObservationBatchRowModel.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -23,8 +23,8 @@ */ import com.google.common.collect.Lists; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.CaracteristicMap; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.FishingOperation; import fr.ifremer.tutti.persistence.entities.data.IndividualObservationBatch; @@ -271,8 +271,8 @@ //------------------------------------------------------------------------// @Override - public AttachementObjectTypeEnum getObjectType() { - return AttachementObjectTypeEnum.SAMPLE; + public ObjectTypeCode2 getObjectType() { + return ObjectTypeCode2.SAMPLE; } @Override Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/marinelitter/MarineLitterBatchRowModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/marinelitter/MarineLitterBatchRowModel.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/marinelitter/MarineLitterBatchRowModel.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -25,14 +25,14 @@ */ import com.google.common.collect.Lists; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.FishingOperation; import fr.ifremer.tutti.persistence.entities.data.MarineLitterBatch; import fr.ifremer.tutti.persistence.entities.data.MarineLitterBatchs; import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; +import fr.ifremer.tutti.type.WeightUnit; import fr.ifremer.tutti.ui.swing.util.AbstractTuttiBeanUIModel; -import fr.ifremer.tutti.type.WeightUnit; import fr.ifremer.tutti.ui.swing.util.attachment.AttachmentModelAware; import org.nuiton.util.beans.Binder; import org.nuiton.util.beans.BinderFactory; @@ -206,8 +206,8 @@ //------------------------------------------------------------------------// @Override - public AttachementObjectTypeEnum getObjectType() { - return AttachementObjectTypeEnum.BATCH; + public ObjectTypeCode2 getObjectType() { + return ObjectTypeCode2.BATCH; } @Override Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchRowModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchRowModel.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchRowModel.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -26,8 +26,8 @@ import com.google.common.base.Preconditions; import com.google.common.collect.Lists; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.TuttiEntities; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.FishingOperation; import fr.ifremer.tutti.persistence.entities.data.SampleCategory; @@ -547,8 +547,8 @@ //------------------------------------------------------------------------// @Override - public AttachementObjectTypeEnum getObjectType() { - return AttachementObjectTypeEnum.BATCH; + public ObjectTypeCode2 getObjectType() { + return ObjectTypeCode2.BATCH; } @Override Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIHandler.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIHandler.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -27,6 +27,7 @@ import com.google.common.base.Preconditions; import com.google.common.collect.Lists; import com.google.common.collect.Sets; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueId; import fr.ifremer.tutti.ui.swing.util.computable.ComputableDataTableCell; import org.nuiton.jaxx.application.swing.table.ColumnIdentifier; import fr.ifremer.tutti.type.WeightUnit; @@ -632,8 +633,7 @@ log.debug("beforeInit: " + ui); } - qualitative_unsorted_id = - getContext().getPersistenceService().getEnumerationFile().QUALITATIVE_UNSORTED_ID; + qualitative_unsorted_id = QualitativeValueId.UNSORTED.getValue(); weightUnit = getConfig().getSpeciesWeightUnit(); Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/create/CreateSpeciesBatchUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/create/CreateSpeciesBatchUIHandler.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/create/CreateSpeciesBatchUIHandler.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -27,6 +27,7 @@ import com.google.common.base.Preconditions; import com.google.common.collect.Lists; import com.google.common.collect.Multimap; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueId; import org.nuiton.jaxx.application.swing.util.Cancelable; import fr.ifremer.tutti.type.WeightUnit; import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; @@ -175,7 +176,7 @@ SampleCategoryModelEntry caracteristic = sampleCategoryModel.getCategoryById(sampleCategoryModel.getFirstCategoryId()); - Integer vracId = getPersistenceService().getEnumerationFile().QUALITATIVE_VRAC_ID; + Integer vracId = QualitativeValueId.SORTED_VRAC.getValue(); CaracteristicQualitativeValue vracValue = null; for (CaracteristicQualitativeValue caracteristicQualitativeValue : caracteristic.getCaracteristic().getQualitativeValue()) { Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/attachment/AttachmentModelAware.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/attachment/AttachmentModelAware.java 2014-04-24 10:05:12 UTC (rev 1724) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/attachment/AttachmentModelAware.java 2014-04-24 10:17:09 UTC (rev 1725) @@ -24,7 +24,7 @@ * #L% */ -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; +import fr.ifremer.adagio.core.dao.referential.pmfm.ObjectTypeCode2; import fr.ifremer.tutti.persistence.entities.data.Attachment; import java.io.Serializable; @@ -43,7 +43,7 @@ String PROPERTY_OBJECT_ID = "objectId"; - AttachementObjectTypeEnum getObjectType(); + ObjectTypeCode2 getObjectType(); Integer getObjectId();

1 0

r1724 - trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation
by tchemit＠users.forge.codelutin.com 24 Apr '14

24 Apr '14

Author: tchemit Date: 2014-04-24 12:05:12 +0200 (Thu, 24 Apr 2014) New Revision: 1724 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/1724 Log: fixes #4991 Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIHandler.java Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIHandler.java 2014-04-23 08:11:03 UTC (rev 1723) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIHandler.java 2014-04-24 10:05:12 UTC (rev 1724) @@ -649,7 +649,13 @@ @Override public void onShowTab(int currentIndex, int newIndex) { - registerValidators(ui.getValidator()); + // validation if no operation + // see http://forge.codelutin.com/issues/4991 + if (getModel().getFishingOperation() == null) { + clearValidators(); + } else { + registerValidators(ui.getValidator()); + } } //------------------------------------------------------------------------//

1 0

r1723 - in trunk: . tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util tutti-ui-swing/src/main/filtered-resources
by tchemit＠users.forge.codelutin.com 23 Apr '14

23 Apr '14

Author: tchemit Date: 2014-04-23 10:11:03 +0200 (Wed, 23 Apr 2014) New Revision: 1723 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/1723 Log: introduce util package Added: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchPersistenceHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchTreeHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/MeasurementPersistenceHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/SamplePersistenceHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/SynchronizationStatusHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/VesselPersonFeaturesPersistenceHelper.java Removed: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MeasurementPersistenceHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SamplePersistenceHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SynchronizationStatusHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/VesselPersonFeaturesPersistenceHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchPersistenceHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchTreeHelper.java Modified: trunk/pom.xml trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AccidentalBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/IndividualObservationBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MarineLitterBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/ScientificCruiseCatchBatchValidator.java trunk/tutti-ui-swing/src/main/filtered-resources/log4j.properties Modified: trunk/pom.xml =================================================================== --- trunk/pom.xml 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/pom.xml 2014-04-23 08:11:03 UTC (rev 1723) @@ -138,7 +138,7 @@  <nuitonI18nVersion>3.0</nuitonI18nVersion> <nuitonValidatorVersion>3.0-rc-1</nuitonValidatorVersion> - <eugenePluginVersion>2.7.4</eugenePluginVersion> + <eugenePluginVersion>2.9-SNAPSHOT</eugenePluginVersion>  <jaxxVersion>2.8.4</jaxxVersion> <swingXVersion>1.6.4</swingXVersion> Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AccidentalBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AccidentalBatchPersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AccidentalBatchPersistenceServiceImpl.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -43,6 +43,8 @@ import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; import fr.ifremer.tutti.persistence.entities.referential.Species; +import fr.ifremer.tutti.persistence.service.util.SamplePersistenceHelper; +import fr.ifremer.tutti.persistence.service.util.SynchronizationStatusHelper; import org.apache.commons.collections.CollectionUtils; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceImpl.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -46,8 +46,9 @@ import fr.ifremer.tutti.persistence.entities.data.BenthosBatchs; import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; import fr.ifremer.tutti.persistence.entities.referential.Species; -import fr.ifremer.tutti.persistence.service.batch.BatchPersistenceHelper; -import fr.ifremer.tutti.persistence.service.batch.BatchTreeHelper; +import fr.ifremer.tutti.persistence.service.util.BatchPersistenceHelper; +import fr.ifremer.tutti.persistence.service.util.BatchTreeHelper; +import fr.ifremer.tutti.persistence.service.util.MeasurementPersistenceHelper; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.springframework.dao.DataIntegrityViolationException; @@ -207,30 +208,6 @@ @Override public void deleteBenthosSubBatch(String id) { batchHelper.deleteSpeciesSubBatch(id); - -// Preconditions.checkNotNull(id); -// -// Integer benthosBatchId = Integer.valueOf(id); -// -// CatchBatch catchBatch = batchHelper.getRootCatchBatchByBatchId(benthosBatchId); -// SortingBatch sortingBatch = batchHelper.getSortingBatchById(catchBatch, benthosBatchId); -// -// // get his children -// Collection<Batch> childBatchs = sortingBatch.getChildBatchs(); -// -// if (CollectionUtils.isNotEmpty(childBatchs)) { -// -// for (Batch childBatch : childBatchs) { -// -// // delete this child and all his children -// Integer childBatchId = childBatch.getId(); -// -// if (log.isDebugEnabled()) { -// log.debug("Delete child [" + childBatchId + "] of species batch: " + id); -// } -// batchHelper.removeWithChildren(childBatchId); -// } -// } } @Override Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -35,8 +35,10 @@ import fr.ifremer.adagio.core.dao.technical.synchronization.SynchronizationStatus; import fr.ifremer.tutti.persistence.entities.data.CatchBatch; import fr.ifremer.tutti.persistence.entities.data.CatchBatchBean; -import fr.ifremer.tutti.persistence.service.batch.BatchPersistenceHelper; -import fr.ifremer.tutti.persistence.service.batch.BatchTreeHelper; +import fr.ifremer.tutti.persistence.service.util.BatchPersistenceHelper; +import fr.ifremer.tutti.persistence.service.util.BatchTreeHelper; +import fr.ifremer.tutti.persistence.service.util.MeasurementPersistenceHelper; +import fr.ifremer.tutti.persistence.service.util.SynchronizationStatusHelper; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.hibernate.FlushMode; Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -53,7 +53,6 @@ import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmDao; import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValue; import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueDao; -import fr.ifremer.adagio.core.dao.technical.synchronization.SynchronizationStatus; import fr.ifremer.tutti.persistence.dao.GearPhysicalFeaturesDaoTutti; import fr.ifremer.tutti.persistence.entities.CaracteristicMap; import fr.ifremer.tutti.persistence.entities.TuttiEntities; @@ -69,6 +68,9 @@ import fr.ifremer.tutti.persistence.entities.referential.Person; import fr.ifremer.tutti.persistence.entities.referential.TuttiLocation; import fr.ifremer.tutti.persistence.entities.referential.Vessel; +import fr.ifremer.tutti.persistence.service.util.MeasurementPersistenceHelper; +import fr.ifremer.tutti.persistence.service.util.SynchronizationStatusHelper; +import fr.ifremer.tutti.persistence.service.util.VesselPersonFeaturesPersistenceHelper; import org.apache.commons.collections.CollectionUtils; import org.apache.commons.lang3.ObjectUtils; import org.apache.commons.lang3.StringUtils; @@ -765,83 +767,4 @@ fishingTrip.getVesselPersonFeatures().clear(); fishingTrip.getVesselPersonFeatures().addAll(vesselPersonFeaturesMap.values()); } - -// public SurveyMeasurement getSurveyMeasurement(FishingTrip fishingTrip, -// Integer pmfmId) { -// SurveyMeasurement result = null; -// -// for (SurveyMeasurement vum : fishingTrip.getSurveyMeasurements()) { -// if (pmfmId.equals(vum.getPmfm().getId())) { -// result = vum; -// break; -// } -// } -// -// return result; -// } -// -// protected SurveyMeasurement createSurveyMeasurement(FishingTrip fishingTrip, -// Integer pmfmId, -// Float numericalValue, -// String alphanumericalValue, -// Integer qualitativevalueId) { -// -// SurveyMeasurement result = SurveyMeasurement.Factory.newInstance(); -// result.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); -// result.setDepartment(fishingTrip.getRecorderDepartment()); -// Pmfm pmfm = load(PmfmImpl.class, pmfmId); -// result.setPmfm(pmfm); -// result.setFishingTrip(fishingTrip); -// -// if (alphanumericalValue != null) { -// result.setAlphanumericalValue(alphanumericalValue); -// } else if (numericalValue != null) { -// result.setNumericalValue(numericalValue); -// } else if (qualitativevalueId != null) { -// result.setQualitativeValue(load(QualitativeValueImpl.class, qualitativevalueId)); -// } -// -// // add it to fishingTrip -// if (fishingTrip.getSurveyMeasurements() == null) { -// -// //create new set of measurements -// fishingTrip.setSurveyMeasurements(Sets.<SurveyMeasurement>newHashSet()); -// } -// -// fishingTrip.getSurveyMeasurements().add(result); -// -// return result; -// } -// -// protected SurveyMeasurement setSurveyMeasurement(FishingTrip fishingTrip, -// Integer pmfmId, -// Float numericalValue, -// String alphanumericalValue, -// Integer qualitativevalueId) { -// SurveyMeasurement result = getSurveyMeasurement(fishingTrip, pmfmId); -// -// if (result == null) { -// result = createSurveyMeasurement(fishingTrip, -// pmfmId, -// numericalValue, -// alphanumericalValue, -// qualitativevalueId); -// } -// -// return result; -// } -// -// protected SurveyMeasurement removeSurveyMeasurement(FishingTrip fishingTrip, -// Integer pmfmId) { -// SurveyMeasurement result = getSurveyMeasurement(fishingTrip, pmfmId); -// -// if (result != null) { -// -// // measurement found, remove it -// result.setFishingTrip(null); -// fishingTrip.getSurveyMeasurements().remove(result); -// } -// -// return result; -// } } Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -58,10 +58,6 @@ import fr.ifremer.adagio.core.dao.referential.gear.GearImpl; import fr.ifremer.adagio.core.dao.referential.location.LocationExtendDao; import fr.ifremer.adagio.core.dao.referential.location.LocationImpl; -import fr.ifremer.adagio.core.dao.referential.pmfm.Pmfm; -import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmImpl; -import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValue; -import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueImpl; import fr.ifremer.adagio.core.dao.technical.synchronization.SynchronizationStatus; import fr.ifremer.adagio.core.service.referential.location.LocationService; import fr.ifremer.tutti.persistence.dao.GearPhysicalFeaturesDaoTutti; @@ -77,6 +73,9 @@ import fr.ifremer.tutti.persistence.entities.referential.Person; import fr.ifremer.tutti.persistence.entities.referential.TuttiLocation; import fr.ifremer.tutti.persistence.entities.referential.Vessel; +import fr.ifremer.tutti.persistence.service.util.MeasurementPersistenceHelper; +import fr.ifremer.tutti.persistence.service.util.SynchronizationStatusHelper; +import fr.ifremer.tutti.persistence.service.util.VesselPersonFeaturesPersistenceHelper; import org.apache.commons.collections.CollectionUtils; import org.apache.commons.collections.MapUtils; import org.apache.commons.lang3.StringUtils; @@ -223,7 +222,7 @@ } // SynchronizationStatus - fishingOperation.setSynchronizationStatus((String)source[colIndex++]); + fishingOperation.setSynchronizationStatus((String) source[colIndex++]); // If not found, compute it using a counter (see "order by startDateTime" in HQL query) if (fishingOperation.getFishingOperationNumber() == null) { @@ -285,7 +284,7 @@ } // SynchronizationStatus - result.setSynchronizationStatus((String)source[colIndex++]); + result.setSynchronizationStatus((String) source[colIndex++]); Short rankOrder = (Short) source[colIndex++]; @@ -879,7 +878,7 @@ // StationNumber if (source.getStationNumber() != null) { - VesselUseMeasurement vum = setVesselUseMeasurement(scientificCruise, vesselUseFeatures, enumeration.PMFM_ID_STATION_NUMBER, null, source.getStationNumber(), null); + VesselUseMeasurement vum = measurementPersistenceHelper.setVesselUseMeasurement(scientificCruise, vesselUseFeatures, enumeration.PMFM_ID_STATION_NUMBER, null, source.getStationNumber(), null); notChangedVesselUseMeasurements.remove(vum); } @@ -926,19 +925,19 @@ // Trawl distance if (source.getTrawlDistance() != null) { - VesselUseMeasurement vum = setVesselUseMeasurement(scientificCruise, vesselUseFeatures, enumeration.PMFM_ID_TRAWL_DISTANCE, source.getTrawlDistance(), null, null); + VesselUseMeasurement vum = measurementPersistenceHelper.setVesselUseMeasurement(scientificCruise, vesselUseFeatures, enumeration.PMFM_ID_TRAWL_DISTANCE, source.getTrawlDistance(), null, null); notChangedVesselUseMeasurements.remove(vum); } // Rectilinear operation { - VesselUseMeasurement vum = setVesselUseMeasurement(scientificCruise, vesselUseFeatures, enumeration.PMFM_ID_RECTILINEAR_OPERATION, null, null, source.isFishingOperationRectiligne() ? enumeration.QUALITATIVE_RECTILINEAR_OPERATION_YES : enumeration.QUALITATIVE_RECTILINEAR_OPERATION_NO); + VesselUseMeasurement vum = measurementPersistenceHelper.setVesselUseMeasurement(scientificCruise, vesselUseFeatures, enumeration.PMFM_ID_RECTILINEAR_OPERATION, null, null, source.isFishingOperationRectiligne() ? enumeration.QUALITATIVE_RECTILINEAR_OPERATION_YES : enumeration.QUALITATIVE_RECTILINEAR_OPERATION_NO); notChangedVesselUseMeasurements.remove(vum); } // Operation is valid ? if (source.getFishingOperationValid() != null) { - VesselUseMeasurement vum = setVesselUseMeasurement(scientificCruise, vesselUseFeatures, enumeration.PMFM_ID_HAUL_VALID, null, null, source.getFishingOperationValid() ? enumeration.QUALITATIVE_HAUL_VALID_YES : enumeration.QUALITATIVE_HAUL_VALID_NO); + VesselUseMeasurement vum = measurementPersistenceHelper.setVesselUseMeasurement(scientificCruise, vesselUseFeatures, enumeration.PMFM_ID_HAUL_VALID, null, null, source.getFishingOperationValid() ? enumeration.QUALITATIVE_HAUL_VALID_YES : enumeration.QUALITATIVE_HAUL_VALID_NO); notChangedVesselUseMeasurements.remove(vum); } @@ -1074,7 +1073,7 @@ CaracteristicMap vesselUseCaracteristics = source.getVesselUseFeatures(); if (MapUtils.isNotEmpty(vesselUseCaracteristics)) { for (Caracteristic caracteristic : vesselUseCaracteristics.keySet()) { - VesselUseMeasurement vum = setVesselUseMeasurement(scientificCruise, vesselUseFeatures, caracteristic, vesselUseCaracteristics.get(caracteristic)); + VesselUseMeasurement vum = measurementPersistenceHelper.setVesselUseMeasurement(scientificCruise, vesselUseFeatures, caracteristic, vesselUseCaracteristics.get(caracteristic)); notChangedVesselUseMeasurements.remove(vum); } } @@ -1263,135 +1262,6 @@ return DEFAULT_EMPTY_LONGITUDE.equals(databaseValue) ? null : databaseValue; } - - protected VesselUseMeasurement getVesselUseMeasurement(ScientificCruise scientificCruise, VesselUseFeatures vesselUseFeatures, - Integer pmfmId, boolean createIfNotExists) { - VesselUseMeasurement vesselUseMeasurement = null; - if (vesselUseFeatures.getVesselUseMeasurements() != null) { - for (VesselUseMeasurement vum : vesselUseFeatures.getVesselUseMeasurements()) { - if (pmfmId.equals(vum.getPmfm().getId())) { - vesselUseMeasurement = vum; - break; - } - } - } - if (vesselUseMeasurement == null) { - if (!createIfNotExists) { - return null; - } - vesselUseMeasurement = VesselUseMeasurement.Factory.newInstance(); - vesselUseMeasurement.setVesselUseFeatures(vesselUseFeatures); - if (vesselUseFeatures.getVesselUseMeasurements() == null) { - vesselUseFeatures.setVesselUseMeasurements(Sets.newHashSet(vesselUseMeasurement)); - } else { - vesselUseFeatures.getVesselUseMeasurements().add(vesselUseMeasurement); - } - vesselUseMeasurement.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); - vesselUseMeasurement.setDepartment(scientificCruise.getRecorderDepartment()); - vesselUseMeasurement.setPmfm(load(PmfmImpl.class, pmfmId)); - } - - return vesselUseMeasurement; - } - - protected VesselUseMeasurement setVesselUseMeasurement(ScientificCruise scientificCruise, VesselUseFeatures vesselUseFeatures, - Integer pmfmId, - Float numericalValue, - String alphanumericalValue, - Integer qualitativevalueId) { - VesselUseMeasurement vesselUseMeasurement = getVesselUseMeasurement(scientificCruise, vesselUseFeatures, pmfmId, true); - - if (alphanumericalValue != null) { - vesselUseMeasurement.setAlphanumericalValue(alphanumericalValue); - } else if (numericalValue != null) { - vesselUseMeasurement.setNumericalValue(numericalValue); - } else if (qualitativevalueId != null) { - vesselUseMeasurement.setQualitativeValue(load(QualitativeValueImpl.class, qualitativevalueId)); - } - - return vesselUseMeasurement; - } - - protected VesselUseMeasurement setVesselUseMeasurement(ScientificCruise scientificCruise, VesselUseFeatures vesselUseFeatures, - Integer pmfmId, - Serializable value) { - VesselUseMeasurement vesselUseMeasurement = getVesselUseMeasurement(scientificCruise, vesselUseFeatures, pmfmId, true); - - if (value instanceof String) { - vesselUseMeasurement.setAlphanumericalValue((String) value); - } else if (value instanceof Float) { - vesselUseMeasurement.setNumericalValue((Float) value); - } else if (value instanceof Integer) { - vesselUseMeasurement.setQualitativeValue(load(QualitativeValueImpl.class, value)); - } - - return vesselUseMeasurement; - } - - protected VesselUseMeasurement setVesselUseMeasurement(ScientificCruise scientificCruise, VesselUseFeatures vesselUseFeatures, - Caracteristic caracteristic, Serializable value) { - VesselUseMeasurement vesselUseMeasurement = getVesselUseMeasurement(scientificCruise, vesselUseFeatures, Integer.valueOf(caracteristic.getId()), true); - measurementPersistenceHelper.setMeasurement(vesselUseMeasurement, caracteristic, value); - return vesselUseMeasurement; - } - -// protected GearUseMeasurement setGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, -// Integer pmfmId, -// Float numericalValue, -// String alphanumericalValue, -// Integer qualitativevalueId) { -// GearUseMeasurement gearUseMeasurement = getGearUseMeasurement(scientificCruise, gearUseFeatures, pmfmId, true); -// -// if (alphanumericalValue != null) { -// gearUseMeasurement.setAlphanumericalValue(alphanumericalValue); -// } else if (numericalValue != null) { -// gearUseMeasurement.setNumericalValue(numericalValue); -// } else if (qualitativevalueId != null) { -// QualitativeValue qv = load(QualitativeValueImpl.class, qualitativevalueId); -// gearUseMeasurement.setQualitativeValue(qv); -// } -// -// return gearUseMeasurement; -// } - -// protected GearUseMeasurement setGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, -// Caracteristic caracteristic, Serializable value) { -// GearUseMeasurement gearUseMeasurement = getGearUseMeasurement(scientificCruise, gearUseFeatures, Integer.valueOf(caracteristic.getId()), true); -// measurementPersistenceHelper.setMeasurement(gearUseMeasurement, caracteristic, value); -// return gearUseMeasurement; -// } -// -// protected GearUseMeasurement getGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, -// Integer pmfmId, boolean createIfNotExists) { -// GearUseMeasurement gearUseMeasurement = null; -// if (gearUseFeatures.getGearUseMeasurements() != null) { -// for (GearUseMeasurement vum : gearUseFeatures.getGearUseMeasurements()) { -// if (pmfmId.equals(vum.getPmfm().getId())) { -// gearUseMeasurement = vum; -// break; -// } -// } -// } -// if (gearUseMeasurement == null) { -// if (!createIfNotExists) { -// return null; -// } -// gearUseMeasurement = GearUseMeasurement.Factory.newInstance(); -// gearUseMeasurement.setGearUseFeatures(gearUseFeatures); -// if (gearUseFeatures.getGearUseMeasurements() == null) { -// gearUseFeatures.setGearUseMeasurements(Sets.newHashSet(gearUseMeasurement)); -// } else { -// gearUseFeatures.getGearUseMeasurements().add(gearUseMeasurement); -// } -// gearUseMeasurement.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); -// gearUseMeasurement.setDepartment(scientificCruise.getRecorderDepartment()); -// Pmfm pmfm = (Pmfm) getCurrentSession().load(PmfmImpl.class, pmfmId); -// gearUseMeasurement.setPmfm(pmfm); -// } -// -// return gearUseMeasurement; -// } - protected void setOperationVesselAssociation(Operation target, List<String> vesselCodes) { boolean noOperationVesselAssociations = Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/IndividualObservationBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/IndividualObservationBatchPersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/IndividualObservationBatchPersistenceServiceImpl.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -45,7 +45,9 @@ import fr.ifremer.tutti.persistence.entities.data.IndividualObservationBatchs; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.persistence.entities.referential.Species; -import fr.ifremer.tutti.persistence.service.batch.BatchPersistenceHelper; +import fr.ifremer.tutti.persistence.service.util.BatchPersistenceHelper; +import fr.ifremer.tutti.persistence.service.util.SamplePersistenceHelper; +import fr.ifremer.tutti.persistence.service.util.SynchronizationStatusHelper; import org.apache.commons.collections.CollectionUtils; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; @@ -140,8 +142,6 @@ Preconditions.checkNotNull(bean); Preconditions.checkState(TuttiEntities.isNew(bean)); Preconditions.checkNotNull(bean.getSpecies()); -// Preconditions.checkNotNull(bean.getSize()); -// Preconditions.checkNotNull(bean.getLengthStepCaracteristic()); FishingOperation fishingOperation = bean.getFishingOperation(); Preconditions.checkNotNull(fishingOperation); @@ -162,8 +162,6 @@ Preconditions.checkNotNull(bean); Preconditions.checkState(!TuttiEntities.isNew(bean)); Preconditions.checkNotNull(bean.getSpecies()); -// Preconditions.checkNotNull(bean.getSize()); -// Preconditions.checkNotNull(bean.getLengthStepCaracteristic()); FishingOperation fishingOperation = bean.getFishingOperation(); Preconditions.checkNotNull(fishingOperation); Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MarineLitterBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MarineLitterBatchPersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MarineLitterBatchPersistenceServiceImpl.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -39,8 +39,9 @@ import fr.ifremer.tutti.persistence.entities.data.MarineLitterBatchs; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; -import fr.ifremer.tutti.persistence.service.batch.BatchPersistenceHelper; -import fr.ifremer.tutti.persistence.service.batch.BatchTreeHelper; +import fr.ifremer.tutti.persistence.service.util.BatchPersistenceHelper; +import fr.ifremer.tutti.persistence.service.util.BatchTreeHelper; +import fr.ifremer.tutti.persistence.service.util.MeasurementPersistenceHelper; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.springframework.stereotype.Service; @@ -304,21 +305,4 @@ sortingMeasurements.removeAll(notChangedSortingMeasurements); } } - -// public void setMarineLitterBatchParents(SortingBatch target, CatchBatch catchBatch) { -// -// Preconditions.checkNotNull(target); -// -// SortingBatch parentBatch = batchTreeHelper.getMarineLitterRootBatch(catchBatch); -// -// if (parentBatch == null) { -// -// SortingBatch horsVracBatch = batchHelper.getOrCreateHorsVracBatch(catchBatch); -// -// parentBatch = batchHelper.getOrCreateMarineLitterRootBatch(catchBatch, horsVracBatch, null); -// } -// -// target.setParentBatch(parentBatch); -// target.setRootBatch(catchBatch); -// } } Deleted: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MeasurementPersistenceHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MeasurementPersistenceHelper.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MeasurementPersistenceHelper.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -1,295 +0,0 @@ -package fr.ifremer.tutti.persistence.service; - -/* - * #%L - * Tutti :: Persistence - * $Id$ - * $HeadURL$ - * %% - * Copyright (C) 2012 - 2013 Ifremer - * %% - * This program is free software: you can redistribute it and/or modify - * it under the terms of the GNU General Public License as - * published by the Free Software Foundation, either version 3 of the - * License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public - * License along with this program. If not, see - * <http://www.gnu.org/licenses/gpl-3.0.html>. - * #L% - */ - -import com.google.common.base.Preconditions; -import com.google.common.collect.Sets; -import fr.ifremer.adagio.core.dao.data.batch.Batch; -import fr.ifremer.adagio.core.dao.data.batch.CatchBatchExtendDao; -import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; -import fr.ifremer.adagio.core.dao.data.measure.GearUseMeasurement; -import fr.ifremer.adagio.core.dao.data.measure.Measurement; -import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; -import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; -import fr.ifremer.adagio.core.dao.data.measure.SurveyMeasurement; -import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; -import fr.ifremer.adagio.core.dao.data.survey.scientificCruise.ScientificCruise; -import fr.ifremer.adagio.core.dao.data.vessel.feature.use.GearUseFeatures; -import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; -import fr.ifremer.adagio.core.dao.referential.pmfm.Pmfm; -import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmImpl; -import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValue; -import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueImpl; -import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; -import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; -import org.springframework.stereotype.Component; - -import javax.annotation.Resource; -import java.io.Serializable; - -/** - * Helper around {@link Measurement}. - * - * @author tchemit <chemit(a)codelutin.com> - * @since 2.0 - */ -@Component("measurementPersistenceHelper") -public class MeasurementPersistenceHelper extends AbstractPersistenceService { - - @Resource(name = "referentialPersistenceService") - protected ReferentialPersistenceService referentialService; - - @Resource(name = "catchBatchDao") - protected CatchBatchExtendDao catchBatchDao; - - public void setMeasurement(Measurement measurement, - Caracteristic caracteristic, - Serializable value) { - if (value == null) { - return; - } - switch (caracteristic.getCaracteristicType()) { - - case NUMBER: - measurement.setNumericalValue((Float) value); - break; - case QUALITATIVE: - Integer qvId = null; - if (value instanceof CaracteristicQualitativeValue) { - qvId = Integer.valueOf(((CaracteristicQualitativeValue) value).getId()); - } else if (value instanceof Integer) { - qvId = (Integer) value; - } - QualitativeValue qv = load(QualitativeValueImpl.class, qvId); - measurement.setQualitativeValue(qv); - break; - case TEXT: - measurement.setAlphanumericalValue((String) value); - break; - } - } - - //------------------------------------------------------------------------// - //-- SortingMeasurement --// - //------------------------------------------------------------------------// - - public SortingMeasurement setSortingMeasurement( - SortingBatch sortingBatch, - Integer pmfmId, - Serializable value) { - Preconditions.checkNotNull(pmfmId); - Preconditions.checkNotNull(value); - - Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); - SortingMeasurement sortingMeasurement = catchBatchDao.getSortingMeasurement( - sortingBatch, pmfmId, getRecorderDepartmentId(), true); - setMeasurement(sortingMeasurement, - caracteristic, - value); - return sortingMeasurement; - } - - public QuantificationMeasurement setWeightMeasurementQuantificationMeasurement(Batch batch, Float weightValue) { - return catchBatchDao.setQuantificationMeasurement(batch, enumeration.PMFM_ID_WEIGHT_MEASURED, getRecorderDepartmentId(), weightValue, true); - } - - public QuantificationMeasurement getWeightMeasurementQuantificationMeasurement(Batch batch) { - QuantificationMeasurement quantificationMeasurement = catchBatchDao.getQuantificationMeasurement(batch, enumeration.PMFM_ID_WEIGHT_MEASURED, getRecorderDepartmentId(), false); - return quantificationMeasurement; - } - - public SortingMeasurement getInheritedSortingMeasurement(SortingBatch sortingBatch) { - return catchBatchDao.getInheritedSortingMeasurement(sortingBatch, enumeration.PMFM_ID_SORTED_UNSORTED); - } - - //------------------------------------------------------------------------// - //-- GearUseMeasurement --// - //------------------------------------------------------------------------// - - public GearUseMeasurement setGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, - Integer pmfmId, - Float numericalValue, - String alphanumericalValue, - Integer qualitativevalueId) { - GearUseMeasurement gearUseMeasurement = getGearUseMeasurement(scientificCruise, gearUseFeatures, pmfmId, true); - - if (alphanumericalValue != null) { - gearUseMeasurement.setAlphanumericalValue(alphanumericalValue); - } else if (numericalValue != null) { - gearUseMeasurement.setNumericalValue(numericalValue); - } else if (qualitativevalueId != null) { - QualitativeValue qv = load(QualitativeValueImpl.class, qualitativevalueId); - gearUseMeasurement.setQualitativeValue(qv); - } - - return gearUseMeasurement; - } - - protected GearUseMeasurement setGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, - Caracteristic caracteristic, Serializable value) { - GearUseMeasurement gearUseMeasurement = getGearUseMeasurement(scientificCruise, gearUseFeatures, Integer.valueOf(caracteristic.getId()), true); - setMeasurement(gearUseMeasurement, caracteristic, value); - return gearUseMeasurement; - } - - protected GearUseMeasurement getGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, - Integer pmfmId, boolean createIfNotExists) { - GearUseMeasurement gearUseMeasurement = null; - if (gearUseFeatures.getGearUseMeasurements() != null) { - for (GearUseMeasurement vum : gearUseFeatures.getGearUseMeasurements()) { - if (pmfmId.equals(vum.getPmfm().getId())) { - gearUseMeasurement = vum; - break; - } - } - } - if (gearUseMeasurement == null) { - if (!createIfNotExists) { - return null; - } - gearUseMeasurement = GearUseMeasurement.Factory.newInstance(); - gearUseMeasurement.setGearUseFeatures(gearUseFeatures); - if (gearUseFeatures.getGearUseMeasurements() == null) { - gearUseFeatures.setGearUseMeasurements(Sets.newHashSet(gearUseMeasurement)); - } else { - gearUseFeatures.getGearUseMeasurements().add(gearUseMeasurement); - } - gearUseMeasurement.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); - gearUseMeasurement.setDepartment(scientificCruise.getRecorderDepartment()); - Pmfm pmfm = (Pmfm) getCurrentSession().load(PmfmImpl.class, pmfmId); - gearUseMeasurement.setPmfm(pmfm); - } - - return gearUseMeasurement; - } - - - //------------------------------------------------------------------------// - //-- Misc --// - //------------------------------------------------------------------------// - - public String toString(Measurement measurement) { - Pmfm pmfm = load(PmfmImpl.class, measurement.getPmfm().getId()); - String value = null; - if (measurement.getQualitativeValue() != null) { - QualitativeValue qualitativeValue = measurement.getQualitativeValue(); - String qualitativeName = load(QualitativeValueImpl.class, qualitativeValue.getId()).getName(); - - value = qualitativeName + " (" + qualitativeValue.getId() + ")"; - } else if (measurement.getNumericalValue() != null) { - value = "" + measurement.getNumericalValue(); - } else if (measurement.getAlphanumericalValue() != null) { - value = measurement.getAlphanumericalValue(); - } - return pmfm.getParameter().getName() + " (" + pmfm.getId() + ") / " + value; - } - - //------------------------------------------------------------------------// - //-- SurveyMeasurement --// - //------------------------------------------------------------------------// - - public SurveyMeasurement setSurveyMeasurement(FishingTrip fishingTrip, - Integer pmfmId, - Float numericalValue, - String alphanumericalValue, - Integer qualitativevalueId) { - SurveyMeasurement result = getSurveyMeasurement(fishingTrip, pmfmId); - - if (result == null) { - result = createSurveyMeasurement(fishingTrip, - pmfmId, - numericalValue, - alphanumericalValue, - qualitativevalueId); - } - - return result; - } - - public SurveyMeasurement removeSurveyMeasurement(FishingTrip fishingTrip, - Integer pmfmId) { - SurveyMeasurement result = getSurveyMeasurement(fishingTrip, pmfmId); - - if (result != null) { - - // measurement found, remove it - result.setFishingTrip(null); - fishingTrip.getSurveyMeasurements().remove(result); - } - - return result; - } - - protected SurveyMeasurement createSurveyMeasurement(FishingTrip fishingTrip, - Integer pmfmId, - Float numericalValue, - String alphanumericalValue, - Integer qualitativevalueId) { - - SurveyMeasurement result = SurveyMeasurement.Factory.newInstance(); - result.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); - result.setDepartment(fishingTrip.getRecorderDepartment()); - Pmfm pmfm = load(PmfmImpl.class, pmfmId); - result.setPmfm(pmfm); - result.setFishingTrip(fishingTrip); - - if (alphanumericalValue != null) { - result.setAlphanumericalValue(alphanumericalValue); - } else if (numericalValue != null) { - result.setNumericalValue(numericalValue); - } else if (qualitativevalueId != null) { - result.setQualitativeValue(load(QualitativeValueImpl.class, qualitativevalueId)); - } - - // add it to fishingTrip - if (fishingTrip.getSurveyMeasurements() == null) { - - //create new set of measurements - fishingTrip.setSurveyMeasurements(Sets.<SurveyMeasurement>newHashSet()); - } - - fishingTrip.getSurveyMeasurements().add(result); - - return result; - } - - protected SurveyMeasurement getSurveyMeasurement(FishingTrip fishingTrip, Integer pmfmId) { - SurveyMeasurement result = null; - - for (SurveyMeasurement vum : fishingTrip.getSurveyMeasurements()) { - if (pmfmId.equals(vum.getPmfm().getId())) { - result = vum; - break; - } - } - - return result; - } - - protected Integer getRecorderDepartmentId() { - // TODO BL : voir si on peut récupérer le departement (du 1er saisisseur ?) - return enumeration.DEPARTMENT_ID_UNKNOWN_RECORDER_DEPARTMENT; - } -} Deleted: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SamplePersistenceHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SamplePersistenceHelper.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SamplePersistenceHelper.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -1,177 +0,0 @@ -package fr.ifremer.tutti.persistence.service; - -/* - * #%L - * Tutti :: Persistence - * $Id$ - * $HeadURL$ - * %% - * Copyright (C) 2012 - 2013 Ifremer - * %% - * This program is free software: you can redistribute it and/or modify - * it under the terms of the GNU General Public License as - * published by the Free Software Foundation, either version 3 of the - * License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public - * License along with this program. If not, see - * <http://www.gnu.org/licenses/gpl-3.0.html>. - * #L% - */ - -import com.google.common.collect.Sets; -import fr.ifremer.adagio.core.dao.data.measure.SampleMeasurement; -import fr.ifremer.adagio.core.dao.data.sample.Sample; -import fr.ifremer.adagio.core.dao.data.sample.SampleDao; -import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; -import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmImpl; -import fr.ifremer.tutti.persistence.entities.CaracteristicMap; -import fr.ifremer.tutti.persistence.entities.TuttiEntities; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; -import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; -import org.hibernate.type.IntegerType; -import org.springframework.stereotype.Component; - -import javax.annotation.Resource; -import java.io.Serializable; -import java.util.Iterator; -import java.util.Set; - -/** - * Helper around {@link Sample}. - * - * @author tchemit <chemit(a)codelutin.com> - * @since 1.6 - */ -@Component("samplePersistenceHelper") -public class SamplePersistenceHelper extends AbstractPersistenceService { - - @Resource(name = "referentialPersistenceService") - protected ReferentialPersistenceService referentialService; - - @Resource(name = "measurementPersistenceHelper") - protected MeasurementPersistenceHelper measurementPersistenceHelper; - - @Resource(name = "attachmentPersistenceService") - protected AttachmentPersistenceService attachmentPersistenceService; - - @Resource(name = "sampleDao") - protected SampleDao sampleDao; - - public Sample create(Sample sample) { - return sampleDao.create(sample); - } - - public void update(Sample sample) { - sampleDao.update(sample); - } - - public Sample load(Integer id) { - return sampleDao.load(id); - } - - public void deleteSample(Integer sampleId) { - - Sample sample = sampleDao.load(sampleId); - if (sample != null) { - sample.getSampleMeasurements().clear(); - sampleDao.remove(sample); - attachmentPersistenceService.deleteAllAttachment( - AttachementObjectTypeEnum.SAMPLE, - sampleId); - } - } - - public void setSampleMeasurements(Sample target, - CaracteristicMap caracteristics) { - - Set<SampleMeasurement> notChangedSampleMeasurements = Sets.newHashSet(); - if (target.getSampleMeasurements() != null) { - notChangedSampleMeasurements.addAll(target.getSampleMeasurements()); - } - - for (Caracteristic caracteristic : caracteristics.keySet()) { - SampleMeasurement vum = setSampleMeasurement( - target, - caracteristic, - caracteristics.get(caracteristic)); - notChangedSampleMeasurements.remove(vum); - } - - if (target.getSampleMeasurements() != null && - notChangedSampleMeasurements.size() > 0) { - target.getSampleMeasurements().removeAll(notChangedSampleMeasurements); - } - } - - public void fillSampleMeasurements(CaracteristicMap result, - Integer sampleId) { - Iterator<Object[]> list = queryList( - "sampleMeasurements", - "sampleId", IntegerType.INSTANCE, sampleId); - while (list.hasNext()) { - int colIndex = 0; - Object[] source = list.next(); - Integer pmfmId = (Integer) source[colIndex++]; - Float numericalValue = (Float) source[colIndex++]; - String alphanumericalValue = (String) source[colIndex++]; - Integer qualitativeValueId = (Integer) source[colIndex]; - - Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); - Serializable value = null; - switch (caracteristic.getCaracteristicType()) { - - case NUMBER: - value = numericalValue; - break; - case QUALITATIVE: - value = TuttiEntities.getQualitativeValue(caracteristic, - qualitativeValueId); - break; - case TEXT: - value = alphanumericalValue; - break; - } - result.put(caracteristic, value); - } - } - - protected SampleMeasurement setSampleMeasurement(Sample sample, - Caracteristic caracteristic, - Serializable value) { - - Integer pmfmId = caracteristic.getIdAsInt(); - - SampleMeasurement result = null; - if (sample.getSampleMeasurements() != null) { - for (SampleMeasurement vum : sample.getSampleMeasurements()) { - if (pmfmId.equals(vum.getPmfm().getId())) { - result = vum; - break; - } - } - } - if (result == null) { - - result = SampleMeasurement.Factory.newInstance(); - - result.setSample(sample); - if (sample.getSampleMeasurements() == null) { - sample.setSampleMeasurements(Sets.newHashSet(result)); - } else { - sample.getSampleMeasurements().add(result); - } - result.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); - result.setDepartment(sample.getRecorderDepartment()); - result.setPmfm(load(PmfmImpl.class, pmfmId)); - } - measurementPersistenceHelper.setMeasurement(result, caracteristic, value); - return result; - } - -} Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -46,8 +46,9 @@ import fr.ifremer.tutti.persistence.entities.data.SpeciesBatchFrequencys; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatchs; import fr.ifremer.tutti.persistence.entities.referential.Species; -import fr.ifremer.tutti.persistence.service.batch.BatchPersistenceHelper; -import fr.ifremer.tutti.persistence.service.batch.BatchTreeHelper; +import fr.ifremer.tutti.persistence.service.util.BatchPersistenceHelper; +import fr.ifremer.tutti.persistence.service.util.BatchTreeHelper; +import fr.ifremer.tutti.persistence.service.util.MeasurementPersistenceHelper; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.springframework.dao.DataIntegrityViolationException; Deleted: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SynchronizationStatusHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SynchronizationStatusHelper.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SynchronizationStatusHelper.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -1,85 +0,0 @@ -package fr.ifremer.tutti.persistence.service; - -import fr.ifremer.adagio.core.dao.data.batch.Batch; -import fr.ifremer.adagio.core.dao.data.batch.CatchBatch; -import fr.ifremer.adagio.core.dao.data.sample.Sample; -import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; -import fr.ifremer.adagio.core.dao.data.survey.scientificCruise.ScientificCruise; -import fr.ifremer.adagio.core.dao.technical.synchronization.SynchronizationStatus; -import org.hibernate.type.IntegerType; -import org.hibernate.type.StringType; -import org.springframework.stereotype.Component; - -/** - * Helper around SynchronizationStatus. - * - * Created on 4/22/14. - * - * @author Tony Chemit <chemit(a)codelutin.com> - * @since 3.5 - */ -@Component("synchronizationStatusHelper") -public class SynchronizationStatusHelper extends AbstractPersistenceService { - - public void setDirty(ScientificCruise scientificCruise) { - String synchronizationStatus = getDirtyValue(); - scientificCruise.setSynchronizationStatus(synchronizationStatus); - } - - public void setDirty(FishingTrip fishingTrip) { - String synchronizationStatus = getDirtyValue(); - fishingTrip.setSynchronizationStatus(synchronizationStatus); - setDirty(fishingTrip.getScientificCruise()); - } - - public void setDirty(CatchBatch catchBatch) { - String synchronizationStatus = getDirtyValue(); - catchBatch.setSynchronizationStatus(synchronizationStatus); - setDirty(catchBatch.getFishingOperation().getFishingTrip()); - } - - public void setDirty(Sample sample) { - String synchronizationStatus = getDirtyValue(); - sample.setSynchronizationStatus(synchronizationStatus); - Batch batch = sample.getBatch(); - if (batch != null && batch instanceof CatchBatch) { - setDirty((CatchBatch) batch); - } else { - setDirty(sample.getFishingOperation().getFishingTrip()); - } - } - - public void setReadyToSynch(String cruiseId) { - - String oldStatus = getDirtyValue(); - String newStatus = SynchronizationStatus.READY_TO_SYNCHRONIZE.getValue(); - - // update scientificCruise - queryUpdate("updateScientificCruiseSynchronizationStatus", - "cruiseId", IntegerType.INSTANCE, cruiseId, - "oldStatus", StringType.INSTANCE, oldStatus, - "newStatus", StringType.INSTANCE, newStatus); - - // update fishingTrip - queryUpdate("updateFishingTripSynchronizationStatus", - "cruiseId", IntegerType.INSTANCE, cruiseId, - "oldStatus", StringType.INSTANCE, oldStatus, - "newStatus", StringType.INSTANCE, newStatus); - - // update catchBatch - queryUpdate("updateCatchBatchSynchronizationStatus", - "cruiseId", IntegerType.INSTANCE, cruiseId, - "oldStatus", StringType.INSTANCE, oldStatus, - "newStatus", StringType.INSTANCE, newStatus); - - // update sample - queryUpdate("updateSampleSynchronizationStatus", - "cruiseId", IntegerType.INSTANCE, cruiseId, - "oldStatus", StringType.INSTANCE, oldStatus, - "newStatus", StringType.INSTANCE, newStatus); - } - - protected String getDirtyValue() { - return SynchronizationStatus.DIRTY.getValue(); - } -} Deleted: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/VesselPersonFeaturesPersistenceHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/VesselPersonFeaturesPersistenceHelper.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/VesselPersonFeaturesPersistenceHelper.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -1,153 +0,0 @@ -package fr.ifremer.tutti.persistence.service; - -/* - * #%L - * Tutti :: Persistence - * $Id$ - * $HeadURL$ - * %% - * Copyright (C) 2012 - 2013 Ifremer - * %% - * This program is free software: you can redistribute it and/or modify - * it under the terms of the GNU General Public License as - * published by the Free Software Foundation, either version 3 of the - * License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public - * License along with this program. If not, see - * <http://www.gnu.org/licenses/gpl-3.0.html>. - * #L% - */ - -import fr.ifremer.adagio.core.dao.administration.user.Person; -import fr.ifremer.adagio.core.dao.administration.user.PersonImpl; -import fr.ifremer.adagio.core.dao.data.operation.FishingOperation; -import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; -import fr.ifremer.adagio.core.dao.data.vessel.feature.person.VesselPersonFeatures; -import fr.ifremer.adagio.core.dao.referential.VesselPersonRole; -import fr.ifremer.adagio.core.dao.referential.VesselPersonRoleImpl; -import org.apache.commons.logging.Log; -import org.apache.commons.logging.LogFactory; -import org.springframework.stereotype.Component; - -import java.util.Date; -import java.util.Map; - -/** - * Helper around {@link VesselPersonFeatures}. - * - * @author tchemit <chemit(a)codelutin.com> - * @since 2.0 - */ -@Component("vesselPersonFeaturesPersistenceHelper") -public class VesselPersonFeaturesPersistenceHelper extends AbstractPersistenceService { - - /** Logger. */ - private static final Log log = - LogFactory.getLog(VesselPersonFeaturesPersistenceHelper.class); - - public VesselPersonFeaturesPersistenceHelper() { - } - - public VesselPersonRole getScientificCruiseManagerRole() { - return load(VesselPersonRoleImpl.class, enumeration.VESSEL_PERSON_ROLE_ID_SCIENTIFIC_CRUISE_MANAGER); - } - - public VesselPersonRole getSortRoomManagerRole() { - return load(VesselPersonRoleImpl.class, enumeration.VESSEL_PERSON_ROLE_ID_SORT_ROOM_MANAGER); - } - - public VesselPersonRole getRecorderPersonRole() { - return load(VesselPersonRoleImpl.class, enumeration.VESSEL_PERSON_ROLE_ID_RECORDER_PERSON); - } - - public void fillVesselPersonFeatures(Map<Integer, VesselPersonFeatures> vesselPersonFeaturesPerPerson, - Integer personId, - FishingTrip fishingTrip, - VesselPersonRole role, - short rankOrder) { - - VesselPersonFeatures vesselPersonFeatures = - vesselPersonFeaturesPerPerson.get(personId); - if (vesselPersonFeatures == null) { - - PersonImpl person = load(PersonImpl.class, personId); - - if (log.isDebugEnabled()) { - log.debug("Create an new vesselPersonFeatures for person: [" + personId + "]" + person.getFirstname() + " - " + person.getLastname()); - } - - vesselPersonFeatures = VesselPersonFeatures.Factory.newInstance(); - vesselPersonFeaturesPerPerson.put(personId, vesselPersonFeatures); - vesselPersonFeatures.setPerson(person); - - vesselPersonFeatures.setFishingTrip(fishingTrip); - vesselPersonFeatures.setStartDate(fishingTrip.getDepartureDateTime()); - vesselPersonFeatures.setEndDate(fishingTrip.getReturnDateTime()); - vesselPersonFeatures.setVessel(fishingTrip.getVessel()); - vesselPersonFeatures.setProgram(fishingTrip.getProgram()); - - vesselPersonFeatures.setCreationDate(fishingTrip.getCreationDate()); - vesselPersonFeatures.setQualityFlag(fishingTrip.getQualityFlag()); - vesselPersonFeatures.setRankOrder(rankOrder); - } - - addRole(role, vesselPersonFeatures); - } - - public void fillVesselPersonFeatures(Map<Integer, VesselPersonFeatures> vesselPersonFeaturesPerPerson, - Integer personId, - FishingOperation fishingOperation, - VesselPersonRole role, - short rankOrder) { - - VesselPersonFeatures vesselPersonFeatures = - vesselPersonFeaturesPerPerson.get(personId); - if (vesselPersonFeatures == null) { - - PersonImpl person = load(PersonImpl.class, personId); - if (log.isDebugEnabled()) { - log.debug("Create an new vesselPersonFeatures for person: [" + personId + "]" + person.getFirstname() + " - " + person.getLastname()); - } - - vesselPersonFeatures = VesselPersonFeatures.Factory.newInstance(); - vesselPersonFeaturesPerPerson.put(personId, vesselPersonFeatures); - vesselPersonFeatures.setOperation(fishingOperation); - vesselPersonFeatures.setFishingTrip(fishingOperation.getFishingTrip()); - vesselPersonFeatures.setPerson(person); - vesselPersonFeatures.setStartDate(fishingOperation.getStartDateTime()); - vesselPersonFeatures.setEndDate(fishingOperation.getEndDateTime()); - vesselPersonFeatures.setVessel(fishingOperation.getVessel()); - vesselPersonFeatures.setProgram(fishingOperation.getFishingTrip().getProgram()); - - vesselPersonFeatures.setCreationDate(new Date()); - vesselPersonFeatures.setQualityFlag(fishingOperation.getQualityFlag()); - vesselPersonFeatures.setRankOrder(rankOrder); - } - - addRole(role, vesselPersonFeatures); - } - - protected void addRole(VesselPersonRole role, - VesselPersonFeatures vesselPersonFeatures) { - Person person = vesselPersonFeatures.getPerson(); - if (vesselPersonFeatures.getVesselPersonRoles().contains(role)) { - if (log.isWarnEnabled()) { - log.warn("vessel person feature for person: " + person.getId() + " with role: " + role.getName() + " already exist, do not add it twice."); - } - } else { - - // add this new role - if (log.isInfoEnabled()) { - log.info("Add vessel person feature for person: " + person.getId() + " with role: " + role.getName()); - } - vesselPersonFeatures.getVesselPersonRoles().add(role); - - } - } -} \ No newline at end of file Deleted: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchPersistenceHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchPersistenceHelper.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchPersistenceHelper.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -1,746 +0,0 @@ -package fr.ifremer.tutti.persistence.service.batch; - -/* - * #%L - * Tutti :: Persistence - * $Id$ - * $HeadURL$ - * %% - * Copyright (C) 2012 - 2013 Ifremer - * %% - * This program is free software: you can redistribute it and/or modify - * it under the terms of the GNU General Public License as - * published by the Free Software Foundation, either version 3 of the - * License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public - * License along with this program. If not, see - * <http://www.gnu.org/licenses/gpl-3.0.html>. - * #L% - */ - -import com.google.common.base.Joiner; -import com.google.common.base.Preconditions; -import com.google.common.collect.Lists; -import fr.ifremer.adagio.core.dao.data.batch.Batch; -import fr.ifremer.adagio.core.dao.data.batch.CatchBatch; -import fr.ifremer.adagio.core.dao.data.batch.CatchBatchExtendDao; -import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; -import fr.ifremer.adagio.core.dao.data.batch.SortingBatchDao; -import fr.ifremer.adagio.core.dao.data.batch.validator.CatchBatchValidationError; -import fr.ifremer.adagio.core.dao.data.batch.validator.CatchBatchValidationException; -import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; -import fr.ifremer.adagio.core.dao.referential.pmfm.Pmfm; -import fr.ifremer.tutti.persistence.InvalidBatchModelException; -import fr.ifremer.tutti.persistence.entities.TuttiEntity; -import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; -import fr.ifremer.tutti.persistence.entities.data.BatchContainer; -import fr.ifremer.tutti.persistence.entities.data.BenthosBatch; -import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; -import fr.ifremer.tutti.persistence.entities.data.SpeciesAbleBatch; -import fr.ifremer.tutti.persistence.entities.data.SpeciesAbleBatchFrequency; -import fr.ifremer.tutti.persistence.entities.data.SpeciesBatch; -import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; -import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; -import fr.ifremer.tutti.persistence.entities.referential.CaracteristicType; -import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; -import fr.ifremer.tutti.persistence.service.AttachmentPersistenceService; -import fr.ifremer.tutti.persistence.service.IndividualObservationBatchPersistenceService; -import fr.ifremer.tutti.persistence.service.ReferentialPersistenceService; -import org.apache.commons.collections.CollectionUtils; -import org.apache.commons.logging.Log; -import org.apache.commons.logging.LogFactory; -import org.springframework.dao.DataIntegrityViolationException; -import org.springframework.dao.DataRetrievalFailureException; -import org.springframework.stereotype.Component; - -import javax.annotation.Resource; -import java.io.Serializable; -import java.text.MessageFormat; -import java.util.Collection; -import java.util.List; - -import static org.nuiton.i18n.I18n.t; - -/** - * Helper around batches. - * - * @author tchemit <chemit(a)codelutin.com> - * @since 1.2 - */ -@Component("batchPersistenceHelper") -public class BatchPersistenceHelper extends AbstractPersistenceService { - - /** Logger. */ - private static final Log log = - LogFactory.getLog(BatchPersistenceHelper.class); - - @Resource(name = "referentialPersistenceService") - protected ReferentialPersistenceService referentialService; - - @Resource(name = "attachmentPersistenceService") - protected AttachmentPersistenceService attachmentPersistenceService; - - @Resource(name = "individualObservationBatchPersistenceService") - protected IndividualObservationBatchPersistenceService individualObservationBatchPersistenceService; - - @Resource(name = "catchBatchDao") - protected CatchBatchExtendDao catchBatchDao; - - @Resource(name = "sortingBatchDao") - protected SortingBatchDao sortingBatchDao; - - @Resource(name = "scientificCruiseCatchBatchValidator") - protected TuttiCatchBatchValidator catchBatchValidator; - - @Resource(name = "batchTreeHelper") - protected BatchTreeHelper batchTreeHelper; - - @Override - public void init() { - super.init(); - catchBatchDao.registerCatchBatchValidator(catchBatchValidator); - } - - @Override - public void close() { - catchBatchDao.unregisterCatchBatchValidator(catchBatchValidator); - super.close(); - } - - public fr.ifremer.tutti.persistence.entities.data.CatchBatch createCatchBatch(fr.ifremer.tutti.persistence.entities.data.CatchBatch bean, CatchBatch catchBatch) { - catchBatch = catchBatchDao.create(catchBatch); - bean.setId(catchBatch.getId()); - return bean; - } - - public void validateSpecies(SampleCategoryModel sampleCategoryModel, - BatchContainer<SpeciesBatch> species) throws InvalidBatchModelException { - List<CatchBatchValidationError> errors = catchBatchValidator.validateSpecies(sampleCategoryModel, species); - List<String> errorsStr = Lists.newArrayList(); - for (CatchBatchValidationError error : errors) { - if (error.getGravity() == CatchBatchValidationError.GRAVITY_ERROR) { - errorsStr.add(error.getMessage()); - } - } - if (!errorsStr.isEmpty()) { - String join = Joiner.on(" ").join(errorsStr); - throw new InvalidBatchModelException(t("tutti.persistence.batch.validation.bad.sample.categories", join)); - } - } - - public void validateBenthos(SampleCategoryModel sampleCategoryModel, - BatchContainer<BenthosBatch> benthos) throws InvalidBatchModelException { - List<CatchBatchValidationError> errors = catchBatchValidator.validateBenthos(sampleCategoryModel, benthos); - - if (CollectionUtils.isNotEmpty(errors)) { - List<String> errorsStr = Lists.newArrayList(); - for (CatchBatchValidationError error : errors) { - if (error.getGravity() == CatchBatchValidationError.GRAVITY_ERROR) { - errorsStr.add(error.getMessage()); - } - } - if (!errorsStr.isEmpty()) { - String join = Joiner.on(" ").join(errorsStr); - throw new InvalidBatchModelException(t("tutti.persistence.batch.validation.bad.sample.categories", join)); - } - } - } - - public void deleteCatchBatch(String fishingOperationId, Integer catchBatchId) { - - // delete individual observation batchs - individualObservationBatchPersistenceService.deleteIndividualObservationBatchForFishingOperation(fishingOperationId); - - getCurrentSession().flush(); - - // get all catch batch children ids (to delete attachments) - List<Integer> ids = catchBatchDao.getAllChildrenIds(catchBatchId); - - catchBatchDao.remove(catchBatchId); - - getCurrentSession().flush(); - - attachmentPersistenceService.deleteAllAttachment( - AttachementObjectTypeEnum.BATCH, - ids.toArray(new Integer[ids.size()])); - } - - public <D extends TuttiEntity> D createSortingBatch(D bean, CatchBatch catchBatch, SortingBatch batch) { - batch = catchBatchDao.createSortingBatch(batch, catchBatch); - bean.setId(batch.getId()); - return bean; - } - - public void removeWithChildren(Integer batchId) { - List<Integer> ids = catchBatchDao.getAllChildrenIds(batchId); - ids.add(batchId); - catchBatchDao.removeWithChildren(batchId); - - attachmentPersistenceService.deleteAllAttachment( - AttachementObjectTypeEnum.BATCH, - ids.toArray(new Integer[ids.size()])); - } - - public void removeWithChildren(Integer batchId, CatchBatch parentCatchBatch) { - List<Integer> ids = catchBatchDao.getAllChildrenIds(batchId); - ids.add(batchId); - catchBatchDao.removeWithChildren(batchId, parentCatchBatch); - - attachmentPersistenceService.deleteAllAttachment( - AttachementObjectTypeEnum.BATCH, - ids.toArray(new Integer[ids.size()])); - } - - public void updateSortingBatch(List<SortingBatch> sortingBatchs, CatchBatch parentCatchBatch) { - catchBatchDao.updateSortingBatch(sortingBatchs, parentCatchBatch); - } - - public SortingBatch loadSortingBatch(Integer sortingBatchId, CatchBatch parentCatchBatch) { - return catchBatchDao.loadSortingBatch(sortingBatchId, parentCatchBatch); - } - - public void update(CatchBatch catchBatch) { - catchBatchDao.update(catchBatch); - } - - public void setSortingBatchReferenceTaxon(String batchId, Integer referenceTaxonId) { - catchBatchDao.setSortingBatchReferenceTaxon(batchId, referenceTaxonId); - } - - public SortingBatch getSortingBatchById(CatchBatch catchBatch, Integer sortingBatchId) { - return catchBatchDao.getSortingBatchById(catchBatch, sortingBatchId); - } - - public void updateSortingBatch(SortingBatch sortingBatch, CatchBatch parentCatchBatch) { - catchBatchDao.updateSortingBatch(sortingBatch, parentCatchBatch); - } - - public List<SortingBatch> getFrequencyChilds(SortingBatch sortingBatch) { - List<SortingBatch> result = Lists.newArrayList(); - - SampleCategoryModel sampleCategoryModel = getSampleCategoryModel(); - - for (Batch batch : sortingBatch.getChildBatchs()) { - SortingBatch child = (SortingBatch) batch; - if (isFrequencyBatch(sampleCategoryModel, child)) { - result.add(child); - } - } - return result; - } - - public List<SortingBatch> getFrequencies(String batchId) { - Preconditions.checkNotNull(batchId); - Integer sortingBatchId = Integer.valueOf(batchId); - CatchBatch catchBatch = getRootCatchBatchByBatchId(sortingBatchId); - SortingBatch sortingBatch = catchBatchDao.getSortingBatchById( - catchBatch, sortingBatchId); - - List<SortingBatch> frequencyChilds = getFrequencyChilds( - sortingBatch); - return frequencyChilds; - } - - public fr.ifremer.adagio.core.dao.data.batch.CatchBatch getRootCatchBatchByFishingOperationId(String fishingOperationId, boolean validate) { - Preconditions.checkNotNull(fishingOperationId); - - Integer catchBatchId = catchBatchDao.getIdByFishingOperationId(Integer.valueOf(fishingOperationId)); - Preconditions.checkNotNull(catchBatchId); - - // whenever want to repair anything from Tutti - fr.ifremer.adagio.core.dao.data.batch.CatchBatch result; - - if (validate) { - - try { - result = catchBatchDao.loadFullTree(catchBatchId, true, false); - } catch (CatchBatchValidationException e) { - throw new InvalidBatchModelException( - "L'arbre d'échantillonage n'est pas compatible avec celui de Tutti.", e); - } - } else { - result = catchBatchDao.loadFullTree(catchBatchId); - } - Preconditions.checkNotNull(result); - return result; - } - - public boolean isCatchBatchExistsForFishingOperation(Integer fishingOperationId) { - return catchBatchDao.isCatchBatchExistsForFishingOperation(fishingOperationId); - } - - public Integer getCatchBatchIdByFishingOperationId(Integer fishingOperationId) throws DataRetrievalFailureException { - return catchBatchDao.getIdByFishingOperationId(fishingOperationId); - } - - public fr.ifremer.adagio.core.dao.data.batch.CatchBatch getRootCatchBatchByBatchId(Integer batchId) { - Preconditions.checkNotNull(batchId); - - Integer catchBatchId = catchBatchDao.getIdBySortingBatchId(batchId); - Preconditions.checkNotNull(catchBatchId); - - // whenever want to repair anything from Tutti - fr.ifremer.adagio.core.dao.data.batch.CatchBatch result; - - result = catchBatchDao.loadFullTree(catchBatchId); - - Preconditions.checkNotNull(result); - return result; - } - - public void setSpeciesBatchParents(Integer sampleCategoryId, - Serializable sampleCategoryValue, - SortingBatch target, - String parentBatchIdStr, - CatchBatch catchBatch) { - - Preconditions.checkNotNull(target); - Preconditions.checkNotNull(catchBatch); - - target.setRootBatch(catchBatch); - - SortingBatch parentBatch; - if (parentBatchIdStr != null) { - - // Load existing parent and root - parentBatch = catchBatchDao.getSortingBatchById(catchBatch, Integer.valueOf(parentBatchIdStr)); - } else { - - // Or retrieve parent batch, from pmfm id - // Retrieve category type - if (!sampleCategoryId.equals(enumeration.PMFM_ID_SORTED_UNSORTED)) { - throw new DataIntegrityViolationException(MessageFormat.format( - "A species or benthos batch with no parent should have a sampleCategoryType {0} (PMFM.ID={1})", - sampleCategoryId, - enumeration.PMFM_ID_SORTED_UNSORTED)); - } - - Integer qualitativeValueId = convertSampleCategoryValueIntoQualitativeId(sampleCategoryValue); - - if (enumeration.QUALITATIVE_VRAC_ID.equals(qualitativeValueId)) { - - // -- Vrac > Species > Alive itemized - parentBatch = batchTreeHelper.getSpeciesVracAliveItemizedRootBatch(catchBatch); - - if (parentBatch == null) { - - // -- Vrac - SortingBatch vracBatch = batchTreeHelper.getVracBatch(catchBatch); - - if (vracBatch == null) { - vracBatch = batchTreeHelper.getOrCreateVracBatch(catchBatch, null, null); - } - - // -- Vrac > Species - SortingBatch vracSpeciesBatch = batchTreeHelper.getSpeciesVracRootBatch(vracBatch); - - if (vracSpeciesBatch == null) { - vracSpeciesBatch = batchTreeHelper.getOrCreateSpeciesVracRootBatch(catchBatch, vracBatch, null); - } - - // -- Vrac > Species > Alive itemized - parentBatch = batchTreeHelper.getOrCreateSpeciesVracAliveItemizedRootBatch(catchBatch, vracSpeciesBatch); - - } - } else if (enumeration.QUALITATIVE_HORS_VRAC_ID.equals(qualitativeValueId)) { - - // -- Hors Vrac > Species - parentBatch = batchTreeHelper.getSpeciesHorsVracRootBatch(catchBatch); - - if (parentBatch == null) { - - // -- Hors Vrac - SortingBatch horsVracBatch = batchTreeHelper.getOrCreateHorsVracBatch(catchBatch); - - // -- Hors Vrac > Species - parentBatch = batchTreeHelper.getOrCreateSpeciesHorsVracRootBatch(catchBatch, horsVracBatch); - } - } else { - - // not possible - throw new DataIntegrityViolationException("Should have Vrac / Hor Vrac qualitative value, but had: " + qualitativeValueId); - } - - } - - Preconditions.checkNotNull(parentBatch); - target.setParentBatch(parentBatch); - } - - public void setBenthosBatchParents(Integer sampleCategoryType, - Serializable sampleCategoryValue, - SortingBatch target, - String parentBatchIdStr, - CatchBatch catchBatch) { - - Preconditions.checkNotNull(target); - Preconditions.checkNotNull(catchBatch); - - target.setRootBatch(catchBatch); - - SortingBatch parentBatch; - if (parentBatchIdStr != null) { - - // Load existing parent and root - parentBatch = catchBatchDao.getSortingBatchById(catchBatch, Integer.valueOf(parentBatchIdStr)); - } else { - - // Or retrieve parent batch, from pmfm id - // Retrieve category type - if (!sampleCategoryType.equals(enumeration.PMFM_ID_SORTED_UNSORTED)) { - throw new DataIntegrityViolationException(MessageFormat.format( - "A species or benthos batch with no parent should have a sampleCategoryType {0} (PMFM.ID={1})", - sampleCategoryType, - enumeration.PMFM_ID_SORTED_UNSORTED)); - } - - Integer qualitativeValueId = convertSampleCategoryValueIntoQualitativeId(sampleCategoryValue); - - if (enumeration.QUALITATIVE_VRAC_ID.equals(qualitativeValueId)) { - - // -- Vrac > Benthos > Alive Itemized - parentBatch = batchTreeHelper.getBenthosVracAliveItemizedRootBatch(catchBatch); - - if (parentBatch == null) { - - // -- Vrac - SortingBatch vracBatch = batchTreeHelper.getVracBatch(catchBatch); - - if (vracBatch == null) { - vracBatch = batchTreeHelper.getOrCreateVracBatch(catchBatch, null, null); - } - - // -- Vrac > Benthos - SortingBatch vracBenthosBatch = batchTreeHelper.getBenthosVracRootBatch(vracBatch); - - if (vracBenthosBatch == null) { - vracBenthosBatch = batchTreeHelper.getOrCreateBenthosVracRootBatch(catchBatch, vracBatch, null); - } - - // -- Vrac > Benthos > Alive itemized - parentBatch = batchTreeHelper.getOrCreateBenthosVracAliveItemizedRootBatch(catchBatch, vracBenthosBatch); - - } - } else if (enumeration.QUALITATIVE_HORS_VRAC_ID.equals(qualitativeValueId)) { - - // -- Hors Vrac > Benthos - parentBatch = batchTreeHelper.getBenthosHorsVracRootBatch(catchBatch); - - if (parentBatch == null) { - - // -- Hors Vrac - SortingBatch horsVracBatch = batchTreeHelper.getOrCreateHorsVracBatch(catchBatch); - - // -- Hors Vrac > Benthos - parentBatch = batchTreeHelper.getOrCreateBenthosHorsVracRootBatch(catchBatch, horsVracBatch); - } - } else { - - // not possible - throw new DataIntegrityViolationException("Should have Vrac / Hors Vrac qualitative value, but had: " + qualitativeValueId); - } - } - - Preconditions.checkNotNull(parentBatch); - target.setParentBatch(parentBatch); - } - - public void setMarineLitterBatchParents(SortingBatch target, CatchBatch catchBatch) { - - Preconditions.checkNotNull(target); - - // -- Hors Vrac > Marine Litter - SortingBatch parentBatch = batchTreeHelper.getMarineLitterRootBatch(catchBatch); - - if (parentBatch == null) { - - // -- Hors Vrac - SortingBatch horsVracBatch = batchTreeHelper.getOrCreateHorsVracBatch(catchBatch); - - // -- Hors Vrac > Marine Litter - parentBatch = batchTreeHelper.getOrCreateMarineLitterRootBatch(catchBatch, horsVracBatch, null); - } - - target.setParentBatch(parentBatch); - target.setRootBatch(catchBatch); - } - - public Integer convertSampleCategoryValueIntoQualitativeId(Serializable value) { - if (value == null) { - return null; - } - Integer qualitativeValueId = null; - if (value instanceof CaracteristicQualitativeValue) { - CaracteristicQualitativeValue cqValue = (CaracteristicQualitativeValue) value; - qualitativeValueId = cqValue.getIdAsInt(); - } else if (value instanceof String) { - qualitativeValueId = Integer.valueOf((String) value); - } - return qualitativeValueId; - } - - public void deleteSpeciesSubBatch(String id) { - Preconditions.checkNotNull(id); - - Integer speciesBatchId = Integer.valueOf(id); - - CatchBatch catchBatch = getRootCatchBatchByBatchId(speciesBatchId); - SortingBatch sortingBatch = getSortingBatchById(catchBatch, speciesBatchId); - - // get his children - Collection<Batch> childBatchs = sortingBatch.getChildBatchs(); - - if (CollectionUtils.isNotEmpty(childBatchs)) { - - for (Batch childBatch : childBatchs) { - - // delete this child and all his children - Integer childBatchId = childBatch.getId(); - - if (log.isDebugEnabled()) { - log.debug("Delete child [" + childBatchId + "] of species batch: " + id); - } - removeWithChildren(childBatchId); - } - } - } - - - public <S extends SpeciesAbleBatch> void setSampleCategoryQualitative(S target, - Integer pmfmId, - Float numericalvalue, - String alphanumericalValue, - Integer qualitativeValueId) { - // skip if null or corresponding to the SORTING_TYPE PMFM (Espèce, Benthos, Plancton, etc.) - if (pmfmId == null || pmfmId.equals(enumeration.PMFM_ID_SORTING_TYPE)) { - return; - } - SampleCategoryModel sampleCategoryModel = getSampleCategoryModel(); - - boolean isSamplingCategory = sampleCategoryModel.containsCategoryId(pmfmId); - Preconditions.checkNotNull(isSamplingCategory, "Unable to find corresponding SampleCategoryEnum for PMFM.ID : " + pmfmId); - - target.setSampleCategoryId(pmfmId); - Serializable categoryValue = getSampleCategoryQualitative( - pmfmId, - numericalvalue, - alphanumericalValue, - qualitativeValueId); - target.setSampleCategoryValue(categoryValue); - } - - public <F extends SpeciesAbleBatchFrequency & TuttiEntity> void entityToBatchFrequency(SortingBatch source, - F target) { - - target.setId(source.getId()); - - // Rank order - target.setRankOrder(Integer.valueOf(source.getRankOrder())); - - target.setNumber(source.getIndividualCount()); - target.setWeight(source.getWeight()); - - Preconditions.checkState(source.getSortingMeasurements().size() == 1, "SortingBatch [" + source.getId() + "] need exactly one sortingMeasurement (to store the length step category), but had " + source.getSortingMeasurements().size()); - SortingMeasurement sm = source.getSortingMeasurements().iterator().next(); - Preconditions.checkNotNull(sm.getPmfm(), "SortingMeasurement [" + sm.getId() + "] can not have a null pmfm"); - Preconditions.checkNotNull(sm.getPmfm().getId(), "SortingMeasurement [" + sm.getId() + "] can not have a pmfm with null id"); - - // Length step category - Caracteristic lengthStepCaracteristic = referentialService.getCaracteristic(sm.getPmfm().getId()); - target.setLengthStepCaracteristic(lengthStepCaracteristic); - - // Length - target.setLengthStep(sm.getNumericalValue()); - } - - public Serializable getSampleCategoryQualitative(Integer pmfmId, - Float numericalvalue, - String alphanumericalValue, - Integer qualitativeValueId) { - - if (numericalvalue != null) { - return numericalvalue; - } - if (alphanumericalValue != null) { - return alphanumericalValue; - } - - Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); - if (caracteristic == null || caracteristic.getCaracteristicType() != CaracteristicType.QUALITATIVE) { - return null; - } - CaracteristicQualitativeValue value = null; - for (CaracteristicQualitativeValue qv : caracteristic.getQualitativeValue()) { - if (qualitativeValueId.equals(qv.getIdAsInt())) { - value = qv; - break; - } - } - - return value; - } - - //------------------------------------------------------------------------// - //-- Internal methods --// - //------------------------------------------------------------------------// - - protected Integer getRecorderDepartmentId() { - // TODO BL : voir si on peut récupérer le departement (du 1er saisisseur ?) - return enumeration.DEPARTMENT_ID_UNKNOWN_RECORDER_DEPARTMENT; - } - - /** - * Check if the given {@code sortingBatch} is a frequency one. - * - * We test that: - * <ul> - * <li>batch has exactly one measurement</li> - * <li>the measurement pmfm is not a sample category</li> - * </ul> - * - * @param sampleCategoryModel model of authorized sample categories - * @param sortingBatch batch to check - * @return {@code true} if given batch is a frequency batch, - * {@code false} otherwise. - */ - public boolean isFrequencyBatch(SampleCategoryModel sampleCategoryModel, - SortingBatch sortingBatch) { - boolean result = false; - if (sortingBatch.getSortingMeasurements().size() == 1) { - SortingMeasurement sm - = sortingBatch.getSortingMeasurements().iterator().next(); - Pmfm pmfm = sm.getPmfm(); - - result = sortingBatch.getIndividualCount() != null && - !sampleCategoryModel.containsCategoryId(pmfm.getId()); - } - return result; - } - -// protected SortingBatch getOrCreate(fr.ifremer.adagio.core.dao.data.batch.CatchBatch target, -// Batch batch, -// Integer pmfmId, -// Integer pmfmValue, -// Float totalWeight, -// short rankOrder) { -// return getOrCreate( -// target, -// batch, -// pmfmId, -// pmfmValue, -// totalWeight, -// null, -// rankOrder -// ); -// } - -// protected SortingBatch getOrCreate(fr.ifremer.adagio.core.dao.data.batch.CatchBatch rootBatch, -// Batch parentBatch, -// Integer sortingPmfmId, -// Integer sortingQualitativeValueId, -// Float weight, -// Float weightBeforeSampling, -// short rankOrder) { -// SortingBatch result = batchTreeHelper.get( -// parentBatch, -// sortingPmfmId, -// sortingQualitativeValueId); -// -// if (result == null) { -// -// result = SortingBatch.Factory.newInstance(); -// if (parentBatch.getChildBatchs() == null) { -// parentBatch.setChildBatchs(Sets.<Batch>newHashSet()); -// } -// parentBatch.getChildBatchs().add(result); -// -// Collection<SortingMeasurement> sortingMeasurements = result.getSortingMeasurements(); -// -// // Create lists to store all updates, then remove not updated items -// Set<SortingMeasurement> notChangedSortingMeasurements = Sets.newHashSet(); -// if (sortingMeasurements != null) { -// notChangedSortingMeasurements.addAll(sortingMeasurements); -// } -// -// // Some mandatory properties : -// QualityFlagImpl qualityFlag = load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED); -// result.setQualityFlag(qualityFlag); -// result.setRootBatch(rootBatch); -// result.setParentBatch(parentBatch); -// result.setExhaustiveInventory(true); -// -// // No taxon or taxon group -// result.setReferenceTaxon(null); -// result.setTaxonGroup(null); -// -// result.setRankOrder(rankOrder); -// -// // Sorting measurement -// if (sortingPmfmId != null && sortingQualitativeValueId != null) { -// SortingMeasurement sm = setSortingMeasurement( -// result, -// sortingPmfmId, -// sortingQualitativeValueId); -// notChangedSortingMeasurements.remove(sm); -// } -// // Removed not changed sorting measurements -// if (sortingMeasurements != null) { -// sortingMeasurements.removeAll(notChangedSortingMeasurements); -// } -// -// catchBatchDao.createSortingBatch(result, rootBatch); -// } -// -// Collection<QuantificationMeasurement> quantificationMeasurements = result.getQuantificationMeasurements(); -// Set<QuantificationMeasurement> notChangedQuantificationMeasurements = Sets.newHashSet(); -// if (quantificationMeasurements != null) { -// notChangedQuantificationMeasurements.addAll(quantificationMeasurements); -// } -// -// // Sampling Ratio -// if (weightBeforeSampling == null || weight == null) { -// result.setSamplingRatio(null); -// result.setSamplingRatioText(null); -// } else { -// String samplingRatioText = weight + "/" + weightBeforeSampling; -// samplingRatioText = samplingRatioText.replaceAll(",", "."); -// result.setSamplingRatioText(samplingRatioText); -// result.setSamplingRatio(weight / weightBeforeSampling); -// } -// -// // Weight -// if (weightBeforeSampling != null || weight != null) { -// Float batchReferenceWeight = weight; -// if (batchReferenceWeight == null) { -// batchReferenceWeight = weightBeforeSampling; -// } -// QuantificationMeasurement quantificationMeasurement = setWeightMeasurementQuantificationMeasurement( -// result, -// batchReferenceWeight); -// notChangedQuantificationMeasurements.remove(quantificationMeasurement); -// } -// // Removed not changed quantification measurements -// if (quantificationMeasurements != null) { -// quantificationMeasurements.removeAll(notChangedQuantificationMeasurements); -// } -// -// return result; -// } - -// protected SortingBatch get(Batch parentBatch, -// Integer sortingPmfmId, -// Integer sortingQualitativeValueId) { -// SortingBatch result = getSortingBatch( -// parentBatch, -// null, -// sortingPmfmId, -// sortingQualitativeValueId); -// return result; -// } -} Deleted: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchTreeHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchTreeHelper.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchTreeHelper.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -1,687 +0,0 @@ -package fr.ifremer.tutti.persistence.service.batch; - -import com.google.common.base.Joiner; -import com.google.common.collect.Sets; -import fr.ifremer.adagio.core.dao.data.batch.Batch; -import fr.ifremer.adagio.core.dao.data.batch.Batchs; -import fr.ifremer.adagio.core.dao.data.batch.CatchBatch; -import fr.ifremer.adagio.core.dao.data.batch.CatchBatchExtendDao; -import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; -import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; -import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; -import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; -import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxon; -import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxonImpl; -import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; -import fr.ifremer.tutti.persistence.service.MeasurementPersistenceHelper; -import org.apache.commons.lang3.StringUtils; -import org.apache.commons.lang3.SystemUtils; -import org.apache.commons.lang3.builder.ToStringBuilder; -import org.apache.commons.lang3.builder.ToStringStyle; -import org.apache.commons.logging.Log; -import org.apache.commons.logging.LogFactory; -import org.springframework.stereotype.Component; - -import javax.annotation.Resource; -import java.util.ArrayList; -import java.util.Collection; -import java.util.Collections; -import java.util.Comparator; -import java.util.List; -import java.util.Set; - -/** - * Helper to build or navigauet into the batch tree. - * - * Created on 4/20/14. - * - * @author Tony Chemit <chemit(a)codelutin.com> - * @since 3.5 - */ -@Component("batchTreeHelper") -public class BatchTreeHelper extends AbstractPersistenceService { - - /** Logger. */ - private static final Log log = LogFactory.getLog(BatchTreeHelper.class); - - @Resource(name = "measurementPersistenceHelper") - protected MeasurementPersistenceHelper measurementPersistenceHelper; - - @Resource(name = "catchBatchDao") - protected CatchBatchExtendDao catchBatchDao; - - protected Comparator<Batch> batchComparator = Batchs.newRankOrderComparator(); - - //------------------------------------------------------------------------// - //-- Get CatchBatch navigation methods --// - //------------------------------------------------------------------------// - - public SortingBatch getSpeciesVracAliveItemizedRootBatch(CatchBatch batch) { - return getSortingBatch( - batch, - "Vrac > Species > Alive Itemized", - enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_VRAC_ID, - enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, - enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED - ); - } - - public SortingBatch getBenthosVracAliveItemizedRootBatch(CatchBatch batch) { - return getSortingBatch( - batch, - "Vrac > Benthos > Alive itemized", - enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_VRAC_ID, - enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS, - enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED - ); - } - - public SortingBatch getSpeciesHorsVracRootBatch(CatchBatch batch) { - return getSortingBatch( - batch, - "Hors Vrac > Species", - enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_HORS_VRAC_ID, - enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES - ); - } - - public SortingBatch getBenthosHorsVracRootBatch(CatchBatch batch) { - return getSortingBatch( - batch, - "Hors Vrac > Benthos", - enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_HORS_VRAC_ID, - enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS - ); - } - - public SortingBatch getMarineLitterRootBatch(CatchBatch batch) { - return getSortingBatch( - batch, - "Hors Vrac > Marine Litter", - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_HORS_VRAC_ID, - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_MARINE_LITTER - ); - } - - public SortingBatch getVracBatch(CatchBatch batch) { - return getSortingBatch( - batch, - "Vrac", - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_VRAC_ID - ); - } - - public SortingBatch getHorsVracBatch(CatchBatch batch) { - return getSortingBatch( - batch, - "Hors Vrac", - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_HORS_VRAC_ID - ); - } - - public SortingBatch getRejectedBatch(CatchBatch batch) { - return getSortingBatch( - batch, - "Unsorted", - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_UNSORTED_ID - ); - } - - //------------------------------------------------------------------------// - //-- Get SortingBatch navigation methods --// - //------------------------------------------------------------------------// - - public SortingBatch getSpeciesVracRootBatch(SortingBatch batch) { - return getSortingBatch( - batch, - "Vrac > Species", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES - ); - } - - public SortingBatch getBenthosVracRootBatch(SortingBatch batch) { - return getSortingBatch( - batch, - "Vrac > Benthos", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS - ); - } - - public SortingBatch getSpeciesVracAliveNotItemizedRootBatch(SortingBatch batch) { - return getSortingBatch( - batch, - "Vrac > Species > Alive not itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED - ); - } - - public SortingBatch getBenthosVracAliveNotItemizedRootBatch(SortingBatch batch) { - return getSortingBatch( - batch, - "Vrac > Benthos > Alive not itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED - ); - } - - public SortingBatch getSpeciesVracInertRootBatch(SortingBatch batch) { - return getSortingBatch( - batch, - "Vrac > Species > Inert (not alive)", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT - ); - } - - public SortingBatch getBenthosVracInertRootBatch(SortingBatch batch) { - return getSortingBatch( - batch, - "Vrac > Benthos > Inert (not alive)", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT - ); - } - - public SortingBatch getSpeciesVracAliveItemizedRootBatch(SortingBatch batch) { - return getSortingBatch( - batch, - "Vrac > Species > Alive itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED - ); - } - - public SortingBatch getBenthosVracAliveItemizedRootBatch(SortingBatch batch) { - return getSortingBatch( - batch, - "Vrac > Benthos > Alive itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED - ); - } - - public SortingBatch getSpeciesHorsVracRootBatch(SortingBatch batch) { - return getSortingBatch( - batch, - "Hors Vrac > Species", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES - ); - } - - public SortingBatch getBenthosHorsVracRootBatch(SortingBatch batch) { - return getSortingBatch( - batch, - "Hors Vrac > Benthos", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS - ); - } - - public SortingBatch getMarineLitterRootBatch(SortingBatch batch) { - return getSortingBatch( - batch, - "Hors Vrac > MarineLitter", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_MARINE_LITTER - ); - } - - //------------------------------------------------------------------------// - //-- getOrCreate methods --// - //------------------------------------------------------------------------// - - public SortingBatch getOrCreateVracBatch(CatchBatch batch, - Float weight, - Float weightBeforeSampling) { - return getOrCreate( - batch, - batch, - "Vrac", - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_VRAC_ID, - weight, - weightBeforeSampling, - (short) 1 - ); - } - - public SortingBatch getOrCreateSpeciesVracRootBatch(CatchBatch target, - SortingBatch batch, - Float totalWeight) { - return getOrCreate( - target, - batch, - "Vrac > Species", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, - totalWeight, - (short) 1 - ); - } - - public SortingBatch getOrCreateSpeciesVracAliveNotItemizedRootBatch(CatchBatch target, - SortingBatch batch, - Float totalWeight) { - return getOrCreate( - target, - batch, - "Vrac > Species > Alive Not Itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED, - totalWeight, - (short) 1 - ); - } - - public SortingBatch getOrCreateSpeciesVracInertRootBatch(CatchBatch target, - SortingBatch batch, - Float totalWeight) { - return getOrCreate( - target, - batch, - "Vrac > Species > Inert", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT, - totalWeight, - (short) 2 - ); - } - - public SortingBatch getOrCreateSpeciesVracAliveItemizedRootBatch(CatchBatch target, - SortingBatch batch) { - return getOrCreate( - target, - batch, - "Vrac > Benthos > Alive Itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED, - null, - (short) 3 - ); - } - - public SortingBatch getOrCreateBenthosVracRootBatch(CatchBatch target, - SortingBatch batch, - Float totalWeight) { - return getOrCreate( - target, - batch, - "Vrac > Benthos", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS, - totalWeight, - (short) 2 - ); - } - - public SortingBatch getOrCreateBenthosVracAliveNotItemizedRootBatch(CatchBatch target, - SortingBatch batch, - Float totalWeight) { - return getOrCreate( - target, - batch, - "Vrac > Benthos > Alive Not itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED, - totalWeight, - (short) 1 - ); - } - - public SortingBatch getOrCreateBenthosVracInertRootBatch(fr.ifremer.adagio.core.dao.data.batch.CatchBatch target, - SortingBatch batch, - Float totalWeight) { - return getOrCreate( - target, - batch, - "Vrac > Benthos > Inert", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT, - totalWeight, - (short) 2 - ); - } - - public SortingBatch getOrCreateBenthosVracAliveItemizedRootBatch(CatchBatch target, - SortingBatch batch) { - return getOrCreate( - target, - batch, - "Vrac > Benthos > Alive Itemized", - enumeration.PMFM_ID_SORTING_TYPE_2, - enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED, - null, - (short) 3 - ); - } - - public SortingBatch getOrCreateHorsVracBatch(CatchBatch batch) { - return getOrCreate( - batch, - batch, - "Hors Vrac", - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_HORS_VRAC_ID, - null, - (short) 2 - ); - } - - public SortingBatch getOrCreateSpeciesHorsVracRootBatch(CatchBatch target, - SortingBatch batch) { - return getOrCreate( - target, - batch, - "Hors Vrac > Species", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, - null, - (short) 1 - ); - } - - public SortingBatch getOrCreateBenthosHorsVracRootBatch(CatchBatch target, - SortingBatch batch) { - return getOrCreate( - target, - batch, - "Hors Vrac > Benthos", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS, - null, - (short) 2 - ); - } - - public SortingBatch getOrCreateMarineLitterRootBatch(CatchBatch target, - SortingBatch batch, - Float totalWeight) { - return getOrCreate( - target, - batch, - "Hors Vrac > Marine Litter", - enumeration.PMFM_ID_SORTING_TYPE, - enumeration.QUALITATIVE_ID_SORTING_TYPE_MARINE_LITTER, - totalWeight, - (short) 3 - ); - } - - public SortingBatch getOrCreateRejectedBatch(CatchBatch batch, - Float weight) { - - return getOrCreate( - batch, - batch, - "Unsorted", - enumeration.PMFM_ID_SORTED_UNSORTED, - enumeration.QUALITATIVE_UNSORTED_ID, - weight, - (short) 3 - ); - } - - //------------------------------------------------------------------------// - //-- Internal methods --// - //------------------------------------------------------------------------// - - protected SortingBatch get(Batch parentBatch, - Integer sortingPmfmId, - Integer sortingQualitativeValueId) { - SortingBatch result = getSortingBatch( - parentBatch, - null, - sortingPmfmId, - sortingQualitativeValueId); - return result; - } - - protected SortingBatch getSortingBatch(Batch source, - String debugMessage, - Integer... ids) { - - return getSortingBatch(source.getChildBatchs(), debugMessage, ids); - } - - protected SortingBatch getSortingBatch(Collection<Batch> childs, - String debugMessage, - Integer... ids) { - - int nbParams = ids.length / 2; - - Object[] params = new Object[nbParams * 3]; - for (int i = 0; i < nbParams; i++) { - Integer sortingPmfmId = ids[2 * i]; - Integer sortingQualitativeValueId = ids[2 * i + 1]; - params[3 * i] = CatchBatchExtendDao.PMFM_ID; - params[3 * i + 1] = sortingPmfmId; - params[3 * i + 2] = sortingQualitativeValueId; - } - SortingBatch result = catchBatchDao.getSortingBatch(childs, params); - if (result != null && debugMessage != null && log.isDebugEnabled()) { - log.debug("Loaded " + debugMessage + ": " + result.getId()); - } - return result; - } - - protected SortingBatch getOrCreate(fr.ifremer.adagio.core.dao.data.batch.CatchBatch rootBatch, - Batch batch, - String debugMessage, - Integer sortingPmfmId, - Integer sortingQualitativeValueId, - Float totalWeight, - short rankOrder) { - return getOrCreate( - rootBatch, - batch, - debugMessage, - sortingPmfmId, - sortingQualitativeValueId, - totalWeight, - null, - rankOrder - ); - } - - protected SortingBatch getOrCreate(fr.ifremer.adagio.core.dao.data.batch.CatchBatch rootBatch, - Batch batch, - String debugMessage, - Integer sortingPmfmId, - Integer sortingQualitativeValueId, - Float weight, - Float weightBeforeSampling, - short rankOrder) { - SortingBatch result = getSortingBatch( - batch, - debugMessage, - sortingPmfmId, - sortingQualitativeValueId); - - if (result == null) { - - result = SortingBatch.Factory.newInstance(); - if (batch.getChildBatchs() == null) { - batch.setChildBatchs(Sets.<Batch>newHashSet()); - } - batch.getChildBatchs().add(result); - - Collection<SortingMeasurement> sortingMeasurements = result.getSortingMeasurements(); - - // Create lists to store all updates, then remove not updated items - Set<SortingMeasurement> notChangedSortingMeasurements = Sets.newHashSet(); - if (sortingMeasurements != null) { - notChangedSortingMeasurements.addAll(sortingMeasurements); - } - - // Some mandatory properties : - QualityFlagImpl qualityFlag = load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED); - result.setQualityFlag(qualityFlag); - result.setRootBatch(rootBatch); - result.setParentBatch(batch); - result.setExhaustiveInventory(true); - - // No taxon or taxon group - result.setReferenceTaxon(null); - result.setTaxonGroup(null); - - result.setRankOrder(rankOrder); - - // Sorting measurement - if (sortingPmfmId != null && sortingQualitativeValueId != null) { - SortingMeasurement sm = measurementPersistenceHelper.setSortingMeasurement( - result, - sortingPmfmId, - sortingQualitativeValueId); - notChangedSortingMeasurements.remove(sm); - } - // Removed not changed sorting measurements - if (sortingMeasurements != null) { - sortingMeasurements.removeAll(notChangedSortingMeasurements); - } - - catchBatchDao.createSortingBatch(result, rootBatch); - } - - Collection<QuantificationMeasurement> quantificationMeasurements = result.getQuantificationMeasurements(); - Set<QuantificationMeasurement> notChangedQuantificationMeasurements = Sets.newHashSet(); - if (quantificationMeasurements != null) { - notChangedQuantificationMeasurements.addAll(quantificationMeasurements); - } - - // Sampling Ratio - if (weightBeforeSampling == null || weight == null) { - result.setSamplingRatio(null); - result.setSamplingRatioText(null); - } else { - String samplingRatioText = weight + "/" + weightBeforeSampling; - samplingRatioText = samplingRatioText.replaceAll(",", "."); - result.setSamplingRatioText(samplingRatioText); - result.setSamplingRatio(weight / weightBeforeSampling); - } - - // Weight - if (weightBeforeSampling != null || weight != null) { - Float batchReferenceWeight = weight; - if (batchReferenceWeight == null) { - batchReferenceWeight = weightBeforeSampling; - } - QuantificationMeasurement quantificationMeasurement = measurementPersistenceHelper.setWeightMeasurementQuantificationMeasurement( - result, - batchReferenceWeight); - notChangedQuantificationMeasurements.remove(quantificationMeasurement); - } - // Removed not changed quantification measurements - if (quantificationMeasurements != null) { - quantificationMeasurements.removeAll(notChangedQuantificationMeasurements); - } - - return result; - } - - //------------------------------------------------------------------------// - //-- Debug methods --// - //------------------------------------------------------------------------// - - public void displayCatchBatch(CatchBatch result) { - StringBuilder sb = new StringBuilder(); - displayBatch(result, 0, sb); - if (log.isDebugEnabled()) { - log.debug(sb.toString()); - } - } - - protected void displayBatch(Batch batch, int level, StringBuilder sb) { - - ToStringStyle style = new BatchTreeToStringStyle(); - - ToStringBuilder builder = new ToStringBuilder(batch, style); - builder.append("id", batch.getId()); - builder.append("rankOrder", batch.getRankOrder()); -// builder.append("level", level); -// if (batch.getParentBatch() != null) { -// builder.append("parentId", batch.getParentBatch().getId()); -// } - - if (batch instanceof CatchBatch) { - CatchBatch catchBatch = (CatchBatch) batch; - builder.append("synchronizationStatus", catchBatch.getSynchronizationStatus()); - } - if (batch instanceof SortingBatch) { - SortingBatch sortingBatch = (SortingBatch) batch; - if (sortingBatch.getSamplingRatio() != null) { - builder.append("samplingRatio", sortingBatch.getSamplingRatio()); - } - if (sortingBatch.getSamplingRatioText() != null) { - builder.append("samplingRatioText", sortingBatch.getSamplingRatioText()); - } - if (sortingBatch.getIndividualCount() != null) { - builder.append("individualCount", sortingBatch.getIndividualCount()); - } - if (sortingBatch.getReferenceTaxon() != null) { - ReferenceTaxon referenceTaxon = sortingBatch.getReferenceTaxon(); - builder.append("referenceTaxon", load(ReferenceTaxonImpl.class, referenceTaxon.getId()).getName()); - } - - SortingMeasurement sm = null; - if (sortingBatch.getSortingMeasurements() != null && sortingBatch.getSortingMeasurements().size() == 1) { - sm = sortingBatch.getSortingMeasurements().iterator().next(); - } else if (sortingBatch.getReferenceTaxon() != null && sortingBatch.getReferenceTaxon().getId() != null) { - sm = measurementPersistenceHelper.getInheritedSortingMeasurement(sortingBatch); - } - if (sm != null) { - String sortingMeasurementStr = measurementPersistenceHelper.toString(sm); - builder.append("sortingMeasurement", sortingMeasurementStr); - } - } - QuantificationMeasurement quantificationMeasurement = measurementPersistenceHelper.getWeightMeasurementQuantificationMeasurement(batch); - if (quantificationMeasurement != null) { - String quantificationMeasurementStr = measurementPersistenceHelper.toString(quantificationMeasurement); - builder.append("weightQuantificationMeasurement", quantificationMeasurementStr); - builder.append("weightQuantificationMeasurement.isReferenceQuantification", quantificationMeasurement.getIsReferenceQuantification()); - } - if (batch.getWeight() != null) { - builder.append("weight", batch.getWeight()); - } - if (batch.getWeightBeforeSampling() != null) { - builder.append("weightBeforeSampling", batch.getWeightBeforeSampling()); - } - builder.append("qualityFlag", load(QualityFlagImpl.class, batch.getQualityFlag().getCode()).getName()); - - String prefix = "\n" + StringUtils.leftPad("", 2 * level); - String batchStr = Joiner.on(prefix).join(builder.build().split("\n")); - sb.append(prefix).append(batchStr); - Collection<Batch> childBatchs = batch.getChildBatchs(); - if (childBatchs != null) { - List<Batch> childBatchList = new ArrayList<>(childBatchs); - Collections.sort(childBatchList, batchComparator); - for (Batch childBatch : childBatchList) { - displayBatch(childBatch, level + 1, sb); - } - } - } - - - static final class BatchTreeToStringStyle extends ToStringStyle { - - private static final long serialVersionUID = 1L; - - BatchTreeToStringStyle() { - super(); - this.setUseClassName(true); - this.setUseShortClassName(true); - this.setContentStart(""); - this.setFieldSeparator(SystemUtils.LINE_SEPARATOR + " | "); - this.setFieldSeparatorAtStart(true); - this.setContentEnd(""); - } - } -} Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/ScientificCruiseCatchBatchValidator.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/ScientificCruiseCatchBatchValidator.java 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/ScientificCruiseCatchBatchValidator.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -34,6 +34,7 @@ import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModelEntry; import fr.ifremer.tutti.persistence.entities.data.SpeciesAbleBatch; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatch; +import fr.ifremer.tutti.persistence.service.util.BatchTreeHelper; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.springframework.stereotype.Component; Copied: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchPersistenceHelper.java (from rev 1722, trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchPersistenceHelper.java) =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchPersistenceHelper.java (rev 0) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchPersistenceHelper.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -0,0 +1,747 @@ +package fr.ifremer.tutti.persistence.service.util; + +/* + * #%L + * Tutti :: Persistence + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + +import com.google.common.base.Joiner; +import com.google.common.base.Preconditions; +import com.google.common.collect.Lists; +import fr.ifremer.adagio.core.dao.data.batch.Batch; +import fr.ifremer.adagio.core.dao.data.batch.CatchBatch; +import fr.ifremer.adagio.core.dao.data.batch.CatchBatchExtendDao; +import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; +import fr.ifremer.adagio.core.dao.data.batch.SortingBatchDao; +import fr.ifremer.adagio.core.dao.data.batch.validator.CatchBatchValidationError; +import fr.ifremer.adagio.core.dao.data.batch.validator.CatchBatchValidationException; +import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; +import fr.ifremer.adagio.core.dao.referential.pmfm.Pmfm; +import fr.ifremer.tutti.persistence.InvalidBatchModelException; +import fr.ifremer.tutti.persistence.entities.TuttiEntity; +import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; +import fr.ifremer.tutti.persistence.entities.data.BatchContainer; +import fr.ifremer.tutti.persistence.entities.data.BenthosBatch; +import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; +import fr.ifremer.tutti.persistence.entities.data.SpeciesAbleBatch; +import fr.ifremer.tutti.persistence.entities.data.SpeciesAbleBatchFrequency; +import fr.ifremer.tutti.persistence.entities.data.SpeciesBatch; +import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; +import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; +import fr.ifremer.tutti.persistence.entities.referential.CaracteristicType; +import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; +import fr.ifremer.tutti.persistence.service.AttachmentPersistenceService; +import fr.ifremer.tutti.persistence.service.IndividualObservationBatchPersistenceService; +import fr.ifremer.tutti.persistence.service.ReferentialPersistenceService; +import fr.ifremer.tutti.persistence.service.batch.TuttiCatchBatchValidator; +import org.apache.commons.collections.CollectionUtils; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; +import org.springframework.dao.DataIntegrityViolationException; +import org.springframework.dao.DataRetrievalFailureException; +import org.springframework.stereotype.Component; + +import javax.annotation.Resource; +import java.io.Serializable; +import java.text.MessageFormat; +import java.util.Collection; +import java.util.List; + +import static org.nuiton.i18n.I18n.t; + +/** + * Helper around batches. + * + * @author tchemit <chemit(a)codelutin.com> + * @since 1.2 + */ +@Component("batchPersistenceHelper") +public class BatchPersistenceHelper extends AbstractPersistenceService { + + /** Logger. */ + private static final Log log = + LogFactory.getLog(BatchPersistenceHelper.class); + + @Resource(name = "referentialPersistenceService") + protected ReferentialPersistenceService referentialService; + + @Resource(name = "attachmentPersistenceService") + protected AttachmentPersistenceService attachmentPersistenceService; + + @Resource(name = "individualObservationBatchPersistenceService") + protected IndividualObservationBatchPersistenceService individualObservationBatchPersistenceService; + + @Resource(name = "catchBatchDao") + protected CatchBatchExtendDao catchBatchDao; + + @Resource(name = "sortingBatchDao") + protected SortingBatchDao sortingBatchDao; + + @Resource(name = "scientificCruiseCatchBatchValidator") + protected TuttiCatchBatchValidator catchBatchValidator; + + @Resource(name = "batchTreeHelper") + protected BatchTreeHelper batchTreeHelper; + + @Override + public void init() { + super.init(); + catchBatchDao.registerCatchBatchValidator(catchBatchValidator); + } + + @Override + public void close() { + catchBatchDao.unregisterCatchBatchValidator(catchBatchValidator); + super.close(); + } + + public fr.ifremer.tutti.persistence.entities.data.CatchBatch createCatchBatch(fr.ifremer.tutti.persistence.entities.data.CatchBatch bean, CatchBatch catchBatch) { + catchBatch = catchBatchDao.create(catchBatch); + bean.setId(catchBatch.getId()); + return bean; + } + + public void validateSpecies(SampleCategoryModel sampleCategoryModel, + BatchContainer<SpeciesBatch> species) throws InvalidBatchModelException { + List<CatchBatchValidationError> errors = catchBatchValidator.validateSpecies(sampleCategoryModel, species); + List<String> errorsStr = Lists.newArrayList(); + for (CatchBatchValidationError error : errors) { + if (error.getGravity() == CatchBatchValidationError.GRAVITY_ERROR) { + errorsStr.add(error.getMessage()); + } + } + if (!errorsStr.isEmpty()) { + String join = Joiner.on(" ").join(errorsStr); + throw new InvalidBatchModelException(t("tutti.persistence.batch.validation.bad.sample.categories", join)); + } + } + + public void validateBenthos(SampleCategoryModel sampleCategoryModel, + BatchContainer<BenthosBatch> benthos) throws InvalidBatchModelException { + List<CatchBatchValidationError> errors = catchBatchValidator.validateBenthos(sampleCategoryModel, benthos); + + if (CollectionUtils.isNotEmpty(errors)) { + List<String> errorsStr = Lists.newArrayList(); + for (CatchBatchValidationError error : errors) { + if (error.getGravity() == CatchBatchValidationError.GRAVITY_ERROR) { + errorsStr.add(error.getMessage()); + } + } + if (!errorsStr.isEmpty()) { + String join = Joiner.on(" ").join(errorsStr); + throw new InvalidBatchModelException(t("tutti.persistence.batch.validation.bad.sample.categories", join)); + } + } + } + + public void deleteCatchBatch(String fishingOperationId, Integer catchBatchId) { + + // delete individual observation batchs + individualObservationBatchPersistenceService.deleteIndividualObservationBatchForFishingOperation(fishingOperationId); + + getCurrentSession().flush(); + + // get all catch batch children ids (to delete attachments) + List<Integer> ids = catchBatchDao.getAllChildrenIds(catchBatchId); + + catchBatchDao.remove(catchBatchId); + + getCurrentSession().flush(); + + attachmentPersistenceService.deleteAllAttachment( + AttachementObjectTypeEnum.BATCH, + ids.toArray(new Integer[ids.size()])); + } + + public <D extends TuttiEntity> D createSortingBatch(D bean, CatchBatch catchBatch, SortingBatch batch) { + batch = catchBatchDao.createSortingBatch(batch, catchBatch); + bean.setId(batch.getId()); + return bean; + } + + public void removeWithChildren(Integer batchId) { + List<Integer> ids = catchBatchDao.getAllChildrenIds(batchId); + ids.add(batchId); + catchBatchDao.removeWithChildren(batchId); + + attachmentPersistenceService.deleteAllAttachment( + AttachementObjectTypeEnum.BATCH, + ids.toArray(new Integer[ids.size()])); + } + + public void removeWithChildren(Integer batchId, CatchBatch parentCatchBatch) { + List<Integer> ids = catchBatchDao.getAllChildrenIds(batchId); + ids.add(batchId); + catchBatchDao.removeWithChildren(batchId, parentCatchBatch); + + attachmentPersistenceService.deleteAllAttachment( + AttachementObjectTypeEnum.BATCH, + ids.toArray(new Integer[ids.size()])); + } + + public void updateSortingBatch(List<SortingBatch> sortingBatchs, CatchBatch parentCatchBatch) { + catchBatchDao.updateSortingBatch(sortingBatchs, parentCatchBatch); + } + + public SortingBatch loadSortingBatch(Integer sortingBatchId, CatchBatch parentCatchBatch) { + return catchBatchDao.loadSortingBatch(sortingBatchId, parentCatchBatch); + } + + public void update(CatchBatch catchBatch) { + catchBatchDao.update(catchBatch); + } + + public void setSortingBatchReferenceTaxon(String batchId, Integer referenceTaxonId) { + catchBatchDao.setSortingBatchReferenceTaxon(batchId, referenceTaxonId); + } + + public SortingBatch getSortingBatchById(CatchBatch catchBatch, Integer sortingBatchId) { + return catchBatchDao.getSortingBatchById(catchBatch, sortingBatchId); + } + + public void updateSortingBatch(SortingBatch sortingBatch, CatchBatch parentCatchBatch) { + catchBatchDao.updateSortingBatch(sortingBatch, parentCatchBatch); + } + + public List<SortingBatch> getFrequencyChilds(SortingBatch sortingBatch) { + List<SortingBatch> result = Lists.newArrayList(); + + SampleCategoryModel sampleCategoryModel = getSampleCategoryModel(); + + for (Batch batch : sortingBatch.getChildBatchs()) { + SortingBatch child = (SortingBatch) batch; + if (isFrequencyBatch(sampleCategoryModel, child)) { + result.add(child); + } + } + return result; + } + + public List<SortingBatch> getFrequencies(String batchId) { + Preconditions.checkNotNull(batchId); + Integer sortingBatchId = Integer.valueOf(batchId); + CatchBatch catchBatch = getRootCatchBatchByBatchId(sortingBatchId); + SortingBatch sortingBatch = catchBatchDao.getSortingBatchById( + catchBatch, sortingBatchId); + + List<SortingBatch> frequencyChilds = getFrequencyChilds( + sortingBatch); + return frequencyChilds; + } + + public fr.ifremer.adagio.core.dao.data.batch.CatchBatch getRootCatchBatchByFishingOperationId(String fishingOperationId, boolean validate) { + Preconditions.checkNotNull(fishingOperationId); + + Integer catchBatchId = catchBatchDao.getIdByFishingOperationId(Integer.valueOf(fishingOperationId)); + Preconditions.checkNotNull(catchBatchId); + + // whenever want to repair anything from Tutti + fr.ifremer.adagio.core.dao.data.batch.CatchBatch result; + + if (validate) { + + try { + result = catchBatchDao.loadFullTree(catchBatchId, true, false); + } catch (CatchBatchValidationException e) { + throw new InvalidBatchModelException( + "L'arbre d'échantillonage n'est pas compatible avec celui de Tutti.", e); + } + } else { + result = catchBatchDao.loadFullTree(catchBatchId); + } + Preconditions.checkNotNull(result); + return result; + } + + public boolean isCatchBatchExistsForFishingOperation(Integer fishingOperationId) { + return catchBatchDao.isCatchBatchExistsForFishingOperation(fishingOperationId); + } + + public Integer getCatchBatchIdByFishingOperationId(Integer fishingOperationId) throws DataRetrievalFailureException { + return catchBatchDao.getIdByFishingOperationId(fishingOperationId); + } + + public fr.ifremer.adagio.core.dao.data.batch.CatchBatch getRootCatchBatchByBatchId(Integer batchId) { + Preconditions.checkNotNull(batchId); + + Integer catchBatchId = catchBatchDao.getIdBySortingBatchId(batchId); + Preconditions.checkNotNull(catchBatchId); + + // whenever want to repair anything from Tutti + fr.ifremer.adagio.core.dao.data.batch.CatchBatch result; + + result = catchBatchDao.loadFullTree(catchBatchId); + + Preconditions.checkNotNull(result); + return result; + } + + public void setSpeciesBatchParents(Integer sampleCategoryId, + Serializable sampleCategoryValue, + SortingBatch target, + String parentBatchIdStr, + CatchBatch catchBatch) { + + Preconditions.checkNotNull(target); + Preconditions.checkNotNull(catchBatch); + + target.setRootBatch(catchBatch); + + SortingBatch parentBatch; + if (parentBatchIdStr != null) { + + // Load existing parent and root + parentBatch = catchBatchDao.getSortingBatchById(catchBatch, Integer.valueOf(parentBatchIdStr)); + } else { + + // Or retrieve parent batch, from pmfm id + // Retrieve category type + if (!sampleCategoryId.equals(enumeration.PMFM_ID_SORTED_UNSORTED)) { + throw new DataIntegrityViolationException(MessageFormat.format( + "A species or benthos batch with no parent should have a sampleCategoryType {0} (PMFM.ID={1})", + sampleCategoryId, + enumeration.PMFM_ID_SORTED_UNSORTED)); + } + + Integer qualitativeValueId = convertSampleCategoryValueIntoQualitativeId(sampleCategoryValue); + + if (enumeration.QUALITATIVE_VRAC_ID.equals(qualitativeValueId)) { + + // -- Vrac > Species > Alive itemized + parentBatch = batchTreeHelper.getSpeciesVracAliveItemizedRootBatch(catchBatch); + + if (parentBatch == null) { + + // -- Vrac + SortingBatch vracBatch = batchTreeHelper.getVracBatch(catchBatch); + + if (vracBatch == null) { + vracBatch = batchTreeHelper.getOrCreateVracBatch(catchBatch, null, null); + } + + // -- Vrac > Species + SortingBatch vracSpeciesBatch = batchTreeHelper.getSpeciesVracRootBatch(vracBatch); + + if (vracSpeciesBatch == null) { + vracSpeciesBatch = batchTreeHelper.getOrCreateSpeciesVracRootBatch(catchBatch, vracBatch, null); + } + + // -- Vrac > Species > Alive itemized + parentBatch = batchTreeHelper.getOrCreateSpeciesVracAliveItemizedRootBatch(catchBatch, vracSpeciesBatch); + + } + } else if (enumeration.QUALITATIVE_HORS_VRAC_ID.equals(qualitativeValueId)) { + + // -- Hors Vrac > Species + parentBatch = batchTreeHelper.getSpeciesHorsVracRootBatch(catchBatch); + + if (parentBatch == null) { + + // -- Hors Vrac + SortingBatch horsVracBatch = batchTreeHelper.getOrCreateHorsVracBatch(catchBatch); + + // -- Hors Vrac > Species + parentBatch = batchTreeHelper.getOrCreateSpeciesHorsVracRootBatch(catchBatch, horsVracBatch); + } + } else { + + // not possible + throw new DataIntegrityViolationException("Should have Vrac / Hor Vrac qualitative value, but had: " + qualitativeValueId); + } + + } + + Preconditions.checkNotNull(parentBatch); + target.setParentBatch(parentBatch); + } + + public void setBenthosBatchParents(Integer sampleCategoryType, + Serializable sampleCategoryValue, + SortingBatch target, + String parentBatchIdStr, + CatchBatch catchBatch) { + + Preconditions.checkNotNull(target); + Preconditions.checkNotNull(catchBatch); + + target.setRootBatch(catchBatch); + + SortingBatch parentBatch; + if (parentBatchIdStr != null) { + + // Load existing parent and root + parentBatch = catchBatchDao.getSortingBatchById(catchBatch, Integer.valueOf(parentBatchIdStr)); + } else { + + // Or retrieve parent batch, from pmfm id + // Retrieve category type + if (!sampleCategoryType.equals(enumeration.PMFM_ID_SORTED_UNSORTED)) { + throw new DataIntegrityViolationException(MessageFormat.format( + "A species or benthos batch with no parent should have a sampleCategoryType {0} (PMFM.ID={1})", + sampleCategoryType, + enumeration.PMFM_ID_SORTED_UNSORTED)); + } + + Integer qualitativeValueId = convertSampleCategoryValueIntoQualitativeId(sampleCategoryValue); + + if (enumeration.QUALITATIVE_VRAC_ID.equals(qualitativeValueId)) { + + // -- Vrac > Benthos > Alive Itemized + parentBatch = batchTreeHelper.getBenthosVracAliveItemizedRootBatch(catchBatch); + + if (parentBatch == null) { + + // -- Vrac + SortingBatch vracBatch = batchTreeHelper.getVracBatch(catchBatch); + + if (vracBatch == null) { + vracBatch = batchTreeHelper.getOrCreateVracBatch(catchBatch, null, null); + } + + // -- Vrac > Benthos + SortingBatch vracBenthosBatch = batchTreeHelper.getBenthosVracRootBatch(vracBatch); + + if (vracBenthosBatch == null) { + vracBenthosBatch = batchTreeHelper.getOrCreateBenthosVracRootBatch(catchBatch, vracBatch, null); + } + + // -- Vrac > Benthos > Alive itemized + parentBatch = batchTreeHelper.getOrCreateBenthosVracAliveItemizedRootBatch(catchBatch, vracBenthosBatch); + + } + } else if (enumeration.QUALITATIVE_HORS_VRAC_ID.equals(qualitativeValueId)) { + + // -- Hors Vrac > Benthos + parentBatch = batchTreeHelper.getBenthosHorsVracRootBatch(catchBatch); + + if (parentBatch == null) { + + // -- Hors Vrac + SortingBatch horsVracBatch = batchTreeHelper.getOrCreateHorsVracBatch(catchBatch); + + // -- Hors Vrac > Benthos + parentBatch = batchTreeHelper.getOrCreateBenthosHorsVracRootBatch(catchBatch, horsVracBatch); + } + } else { + + // not possible + throw new DataIntegrityViolationException("Should have Vrac / Hors Vrac qualitative value, but had: " + qualitativeValueId); + } + } + + Preconditions.checkNotNull(parentBatch); + target.setParentBatch(parentBatch); + } + + public void setMarineLitterBatchParents(SortingBatch target, CatchBatch catchBatch) { + + Preconditions.checkNotNull(target); + + // -- Hors Vrac > Marine Litter + SortingBatch parentBatch = batchTreeHelper.getMarineLitterRootBatch(catchBatch); + + if (parentBatch == null) { + + // -- Hors Vrac + SortingBatch horsVracBatch = batchTreeHelper.getOrCreateHorsVracBatch(catchBatch); + + // -- Hors Vrac > Marine Litter + parentBatch = batchTreeHelper.getOrCreateMarineLitterRootBatch(catchBatch, horsVracBatch, null); + } + + target.setParentBatch(parentBatch); + target.setRootBatch(catchBatch); + } + + public Integer convertSampleCategoryValueIntoQualitativeId(Serializable value) { + if (value == null) { + return null; + } + Integer qualitativeValueId = null; + if (value instanceof CaracteristicQualitativeValue) { + CaracteristicQualitativeValue cqValue = (CaracteristicQualitativeValue) value; + qualitativeValueId = cqValue.getIdAsInt(); + } else if (value instanceof String) { + qualitativeValueId = Integer.valueOf((String) value); + } + return qualitativeValueId; + } + + public void deleteSpeciesSubBatch(String id) { + Preconditions.checkNotNull(id); + + Integer speciesBatchId = Integer.valueOf(id); + + CatchBatch catchBatch = getRootCatchBatchByBatchId(speciesBatchId); + SortingBatch sortingBatch = getSortingBatchById(catchBatch, speciesBatchId); + + // get his children + Collection<Batch> childBatchs = sortingBatch.getChildBatchs(); + + if (CollectionUtils.isNotEmpty(childBatchs)) { + + for (Batch childBatch : childBatchs) { + + // delete this child and all his children + Integer childBatchId = childBatch.getId(); + + if (log.isDebugEnabled()) { + log.debug("Delete child [" + childBatchId + "] of species batch: " + id); + } + removeWithChildren(childBatchId); + } + } + } + + + public <S extends SpeciesAbleBatch> void setSampleCategoryQualitative(S target, + Integer pmfmId, + Float numericalvalue, + String alphanumericalValue, + Integer qualitativeValueId) { + // skip if null or corresponding to the SORTING_TYPE PMFM (Espèce, Benthos, Plancton, etc.) + if (pmfmId == null || pmfmId.equals(enumeration.PMFM_ID_SORTING_TYPE)) { + return; + } + SampleCategoryModel sampleCategoryModel = getSampleCategoryModel(); + + boolean isSamplingCategory = sampleCategoryModel.containsCategoryId(pmfmId); + Preconditions.checkNotNull(isSamplingCategory, "Unable to find corresponding SampleCategoryEnum for PMFM.ID : " + pmfmId); + + target.setSampleCategoryId(pmfmId); + Serializable categoryValue = getSampleCategoryQualitative( + pmfmId, + numericalvalue, + alphanumericalValue, + qualitativeValueId); + target.setSampleCategoryValue(categoryValue); + } + + public <F extends SpeciesAbleBatchFrequency & TuttiEntity> void entityToBatchFrequency(SortingBatch source, + F target) { + + target.setId(source.getId()); + + // Rank order + target.setRankOrder(Integer.valueOf(source.getRankOrder())); + + target.setNumber(source.getIndividualCount()); + target.setWeight(source.getWeight()); + + Preconditions.checkState(source.getSortingMeasurements().size() == 1, "SortingBatch [" + source.getId() + "] need exactly one sortingMeasurement (to store the length step category), but had " + source.getSortingMeasurements().size()); + SortingMeasurement sm = source.getSortingMeasurements().iterator().next(); + Preconditions.checkNotNull(sm.getPmfm(), "SortingMeasurement [" + sm.getId() + "] can not have a null pmfm"); + Preconditions.checkNotNull(sm.getPmfm().getId(), "SortingMeasurement [" + sm.getId() + "] can not have a pmfm with null id"); + + // Length step category + Caracteristic lengthStepCaracteristic = referentialService.getCaracteristic(sm.getPmfm().getId()); + target.setLengthStepCaracteristic(lengthStepCaracteristic); + + // Length + target.setLengthStep(sm.getNumericalValue()); + } + + public Serializable getSampleCategoryQualitative(Integer pmfmId, + Float numericalvalue, + String alphanumericalValue, + Integer qualitativeValueId) { + + if (numericalvalue != null) { + return numericalvalue; + } + if (alphanumericalValue != null) { + return alphanumericalValue; + } + + Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); + if (caracteristic == null || caracteristic.getCaracteristicType() != CaracteristicType.QUALITATIVE) { + return null; + } + CaracteristicQualitativeValue value = null; + for (CaracteristicQualitativeValue qv : caracteristic.getQualitativeValue()) { + if (qualitativeValueId.equals(qv.getIdAsInt())) { + value = qv; + break; + } + } + + return value; + } + + //------------------------------------------------------------------------// + //-- Internal methods --// + //------------------------------------------------------------------------// + + protected Integer getRecorderDepartmentId() { + // TODO BL : voir si on peut récupérer le departement (du 1er saisisseur ?) + return enumeration.DEPARTMENT_ID_UNKNOWN_RECORDER_DEPARTMENT; + } + + /** + * Check if the given {@code sortingBatch} is a frequency one. + * + * We test that: + * <ul> + * <li>batch has exactly one measurement</li> + * <li>the measurement pmfm is not a sample category</li> + * </ul> + * + * @param sampleCategoryModel model of authorized sample categories + * @param sortingBatch batch to check + * @return {@code true} if given batch is a frequency batch, + * {@code false} otherwise. + */ + public boolean isFrequencyBatch(SampleCategoryModel sampleCategoryModel, + SortingBatch sortingBatch) { + boolean result = false; + if (sortingBatch.getSortingMeasurements().size() == 1) { + SortingMeasurement sm + = sortingBatch.getSortingMeasurements().iterator().next(); + Pmfm pmfm = sm.getPmfm(); + + result = sortingBatch.getIndividualCount() != null && + !sampleCategoryModel.containsCategoryId(pmfm.getId()); + } + return result; + } + +// protected SortingBatch getOrCreate(fr.ifremer.adagio.core.dao.data.batch.CatchBatch target, +// Batch batch, +// Integer pmfmId, +// Integer pmfmValue, +// Float totalWeight, +// short rankOrder) { +// return getOrCreate( +// target, +// batch, +// pmfmId, +// pmfmValue, +// totalWeight, +// null, +// rankOrder +// ); +// } + +// protected SortingBatch getOrCreate(fr.ifremer.adagio.core.dao.data.batch.CatchBatch rootBatch, +// Batch parentBatch, +// Integer sortingPmfmId, +// Integer sortingQualitativeValueId, +// Float weight, +// Float weightBeforeSampling, +// short rankOrder) { +// SortingBatch result = batchTreeHelper.get( +// parentBatch, +// sortingPmfmId, +// sortingQualitativeValueId); +// +// if (result == null) { +// +// result = SortingBatch.Factory.newInstance(); +// if (parentBatch.getChildBatchs() == null) { +// parentBatch.setChildBatchs(Sets.<Batch>newHashSet()); +// } +// parentBatch.getChildBatchs().add(result); +// +// Collection<SortingMeasurement> sortingMeasurements = result.getSortingMeasurements(); +// +// // Create lists to store all updates, then remove not updated items +// Set<SortingMeasurement> notChangedSortingMeasurements = Sets.newHashSet(); +// if (sortingMeasurements != null) { +// notChangedSortingMeasurements.addAll(sortingMeasurements); +// } +// +// // Some mandatory properties : +// QualityFlagImpl qualityFlag = load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED); +// result.setQualityFlag(qualityFlag); +// result.setRootBatch(rootBatch); +// result.setParentBatch(parentBatch); +// result.setExhaustiveInventory(true); +// +// // No taxon or taxon group +// result.setReferenceTaxon(null); +// result.setTaxonGroup(null); +// +// result.setRankOrder(rankOrder); +// +// // Sorting measurement +// if (sortingPmfmId != null && sortingQualitativeValueId != null) { +// SortingMeasurement sm = setSortingMeasurement( +// result, +// sortingPmfmId, +// sortingQualitativeValueId); +// notChangedSortingMeasurements.remove(sm); +// } +// // Removed not changed sorting measurements +// if (sortingMeasurements != null) { +// sortingMeasurements.removeAll(notChangedSortingMeasurements); +// } +// +// catchBatchDao.createSortingBatch(result, rootBatch); +// } +// +// Collection<QuantificationMeasurement> quantificationMeasurements = result.getQuantificationMeasurements(); +// Set<QuantificationMeasurement> notChangedQuantificationMeasurements = Sets.newHashSet(); +// if (quantificationMeasurements != null) { +// notChangedQuantificationMeasurements.addAll(quantificationMeasurements); +// } +// +// // Sampling Ratio +// if (weightBeforeSampling == null || weight == null) { +// result.setSamplingRatio(null); +// result.setSamplingRatioText(null); +// } else { +// String samplingRatioText = weight + "/" + weightBeforeSampling; +// samplingRatioText = samplingRatioText.replaceAll(",", "."); +// result.setSamplingRatioText(samplingRatioText); +// result.setSamplingRatio(weight / weightBeforeSampling); +// } +// +// // Weight +// if (weightBeforeSampling != null || weight != null) { +// Float batchReferenceWeight = weight; +// if (batchReferenceWeight == null) { +// batchReferenceWeight = weightBeforeSampling; +// } +// QuantificationMeasurement quantificationMeasurement = setWeightMeasurementQuantificationMeasurement( +// result, +// batchReferenceWeight); +// notChangedQuantificationMeasurements.remove(quantificationMeasurement); +// } +// // Removed not changed quantification measurements +// if (quantificationMeasurements != null) { +// quantificationMeasurements.removeAll(notChangedQuantificationMeasurements); +// } +// +// return result; +// } + +// protected SortingBatch get(Batch parentBatch, +// Integer sortingPmfmId, +// Integer sortingQualitativeValueId) { +// SortingBatch result = getSortingBatch( +// parentBatch, +// null, +// sortingPmfmId, +// sortingQualitativeValueId); +// return result; +// } +} Copied: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchTreeHelper.java (from rev 1722, trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchTreeHelper.java) =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchTreeHelper.java (rev 0) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/BatchTreeHelper.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -0,0 +1,686 @@ +package fr.ifremer.tutti.persistence.service.util; + +import com.google.common.base.Joiner; +import com.google.common.collect.Sets; +import fr.ifremer.adagio.core.dao.data.batch.Batch; +import fr.ifremer.adagio.core.dao.data.batch.Batchs; +import fr.ifremer.adagio.core.dao.data.batch.CatchBatch; +import fr.ifremer.adagio.core.dao.data.batch.CatchBatchExtendDao; +import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; +import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; +import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; +import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; +import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxon; +import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxonImpl; +import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; +import org.apache.commons.lang3.StringUtils; +import org.apache.commons.lang3.SystemUtils; +import org.apache.commons.lang3.builder.ToStringBuilder; +import org.apache.commons.lang3.builder.ToStringStyle; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; +import org.springframework.stereotype.Component; + +import javax.annotation.Resource; +import java.util.ArrayList; +import java.util.Collection; +import java.util.Collections; +import java.util.Comparator; +import java.util.List; +import java.util.Set; + +/** + * Helper to build or navigauet into the batch tree. + * + * Created on 4/20/14. + * + * @author Tony Chemit <chemit(a)codelutin.com> + * @since 3.5 + */ +@Component("batchTreeHelper") +public class BatchTreeHelper extends AbstractPersistenceService { + + /** Logger. */ + private static final Log log = LogFactory.getLog(BatchTreeHelper.class); + + @Resource(name = "measurementPersistenceHelper") + protected MeasurementPersistenceHelper measurementPersistenceHelper; + + @Resource(name = "catchBatchDao") + protected CatchBatchExtendDao catchBatchDao; + + protected Comparator<Batch> batchComparator = Batchs.newRankOrderComparator(); + + //------------------------------------------------------------------------// + //-- Get CatchBatch navigation methods --// + //------------------------------------------------------------------------// + + public SortingBatch getSpeciesVracAliveItemizedRootBatch(CatchBatch batch) { + return getSortingBatch( + batch, + "Vrac > Species > Alive Itemized", + enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_VRAC_ID, + enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, + enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED + ); + } + + public SortingBatch getBenthosVracAliveItemizedRootBatch(CatchBatch batch) { + return getSortingBatch( + batch, + "Vrac > Benthos > Alive itemized", + enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_VRAC_ID, + enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS, + enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED + ); + } + + public SortingBatch getSpeciesHorsVracRootBatch(CatchBatch batch) { + return getSortingBatch( + batch, + "Hors Vrac > Species", + enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_HORS_VRAC_ID, + enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES + ); + } + + public SortingBatch getBenthosHorsVracRootBatch(CatchBatch batch) { + return getSortingBatch( + batch, + "Hors Vrac > Benthos", + enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_HORS_VRAC_ID, + enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS + ); + } + + public SortingBatch getMarineLitterRootBatch(CatchBatch batch) { + return getSortingBatch( + batch, + "Hors Vrac > Marine Litter", + enumeration.PMFM_ID_SORTED_UNSORTED, + enumeration.QUALITATIVE_HORS_VRAC_ID, + enumeration.PMFM_ID_SORTING_TYPE, + enumeration.QUALITATIVE_ID_SORTING_TYPE_MARINE_LITTER + ); + } + + public SortingBatch getVracBatch(CatchBatch batch) { + return getSortingBatch( + batch, + "Vrac", + enumeration.PMFM_ID_SORTED_UNSORTED, + enumeration.QUALITATIVE_VRAC_ID + ); + } + + public SortingBatch getHorsVracBatch(CatchBatch batch) { + return getSortingBatch( + batch, + "Hors Vrac", + enumeration.PMFM_ID_SORTED_UNSORTED, + enumeration.QUALITATIVE_HORS_VRAC_ID + ); + } + + public SortingBatch getRejectedBatch(CatchBatch batch) { + return getSortingBatch( + batch, + "Unsorted", + enumeration.PMFM_ID_SORTED_UNSORTED, + enumeration.QUALITATIVE_UNSORTED_ID + ); + } + + //------------------------------------------------------------------------// + //-- Get SortingBatch navigation methods --// + //------------------------------------------------------------------------// + + public SortingBatch getSpeciesVracRootBatch(SortingBatch batch) { + return getSortingBatch( + batch, + "Vrac > Species", + enumeration.PMFM_ID_SORTING_TYPE, + enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES + ); + } + + public SortingBatch getBenthosVracRootBatch(SortingBatch batch) { + return getSortingBatch( + batch, + "Vrac > Benthos", + enumeration.PMFM_ID_SORTING_TYPE, + enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS + ); + } + + public SortingBatch getSpeciesVracAliveNotItemizedRootBatch(SortingBatch batch) { + return getSortingBatch( + batch, + "Vrac > Species > Alive not itemized", + enumeration.PMFM_ID_SORTING_TYPE_2, + enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED + ); + } + + public SortingBatch getBenthosVracAliveNotItemizedRootBatch(SortingBatch batch) { + return getSortingBatch( + batch, + "Vrac > Benthos > Alive not itemized", + enumeration.PMFM_ID_SORTING_TYPE_2, + enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED + ); + } + + public SortingBatch getSpeciesVracInertRootBatch(SortingBatch batch) { + return getSortingBatch( + batch, + "Vrac > Species > Inert (not alive)", + enumeration.PMFM_ID_SORTING_TYPE_2, + enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT + ); + } + + public SortingBatch getBenthosVracInertRootBatch(SortingBatch batch) { + return getSortingBatch( + batch, + "Vrac > Benthos > Inert (not alive)", + enumeration.PMFM_ID_SORTING_TYPE_2, + enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT + ); + } + + public SortingBatch getSpeciesVracAliveItemizedRootBatch(SortingBatch batch) { + return getSortingBatch( + batch, + "Vrac > Species > Alive itemized", + enumeration.PMFM_ID_SORTING_TYPE_2, + enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED + ); + } + + public SortingBatch getBenthosVracAliveItemizedRootBatch(SortingBatch batch) { + return getSortingBatch( + batch, + "Vrac > Benthos > Alive itemized", + enumeration.PMFM_ID_SORTING_TYPE_2, + enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED + ); + } + + public SortingBatch getSpeciesHorsVracRootBatch(SortingBatch batch) { + return getSortingBatch( + batch, + "Hors Vrac > Species", + enumeration.PMFM_ID_SORTING_TYPE, + enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES + ); + } + + public SortingBatch getBenthosHorsVracRootBatch(SortingBatch batch) { + return getSortingBatch( + batch, + "Hors Vrac > Benthos", + enumeration.PMFM_ID_SORTING_TYPE, + enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS + ); + } + + public SortingBatch getMarineLitterRootBatch(SortingBatch batch) { + return getSortingBatch( + batch, + "Hors Vrac > MarineLitter", + enumeration.PMFM_ID_SORTING_TYPE, + enumeration.QUALITATIVE_ID_SORTING_TYPE_MARINE_LITTER + ); + } + + //------------------------------------------------------------------------// + //-- getOrCreate methods --// + //------------------------------------------------------------------------// + + public SortingBatch getOrCreateVracBatch(CatchBatch batch, + Float weight, + Float weightBeforeSampling) { + return getOrCreate( + batch, + batch, + "Vrac", + enumeration.PMFM_ID_SORTED_UNSORTED, + enumeration.QUALITATIVE_VRAC_ID, + weight, + weightBeforeSampling, + (short) 1 + ); + } + + public SortingBatch getOrCreateSpeciesVracRootBatch(CatchBatch target, + SortingBatch batch, + Float totalWeight) { + return getOrCreate( + target, + batch, + "Vrac > Species", + enumeration.PMFM_ID_SORTING_TYPE, + enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, + totalWeight, + (short) 1 + ); + } + + public SortingBatch getOrCreateSpeciesVracAliveNotItemizedRootBatch(CatchBatch target, + SortingBatch batch, + Float totalWeight) { + return getOrCreate( + target, + batch, + "Vrac > Species > Alive Not Itemized", + enumeration.PMFM_ID_SORTING_TYPE_2, + enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED, + totalWeight, + (short) 1 + ); + } + + public SortingBatch getOrCreateSpeciesVracInertRootBatch(CatchBatch target, + SortingBatch batch, + Float totalWeight) { + return getOrCreate( + target, + batch, + "Vrac > Species > Inert", + enumeration.PMFM_ID_SORTING_TYPE_2, + enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT, + totalWeight, + (short) 2 + ); + } + + public SortingBatch getOrCreateSpeciesVracAliveItemizedRootBatch(CatchBatch target, + SortingBatch batch) { + return getOrCreate( + target, + batch, + "Vrac > Benthos > Alive Itemized", + enumeration.PMFM_ID_SORTING_TYPE_2, + enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED, + null, + (short) 3 + ); + } + + public SortingBatch getOrCreateBenthosVracRootBatch(CatchBatch target, + SortingBatch batch, + Float totalWeight) { + return getOrCreate( + target, + batch, + "Vrac > Benthos", + enumeration.PMFM_ID_SORTING_TYPE, + enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS, + totalWeight, + (short) 2 + ); + } + + public SortingBatch getOrCreateBenthosVracAliveNotItemizedRootBatch(CatchBatch target, + SortingBatch batch, + Float totalWeight) { + return getOrCreate( + target, + batch, + "Vrac > Benthos > Alive Not itemized", + enumeration.PMFM_ID_SORTING_TYPE_2, + enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED, + totalWeight, + (short) 1 + ); + } + + public SortingBatch getOrCreateBenthosVracInertRootBatch(fr.ifremer.adagio.core.dao.data.batch.CatchBatch target, + SortingBatch batch, + Float totalWeight) { + return getOrCreate( + target, + batch, + "Vrac > Benthos > Inert", + enumeration.PMFM_ID_SORTING_TYPE_2, + enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT, + totalWeight, + (short) 2 + ); + } + + public SortingBatch getOrCreateBenthosVracAliveItemizedRootBatch(CatchBatch target, + SortingBatch batch) { + return getOrCreate( + target, + batch, + "Vrac > Benthos > Alive Itemized", + enumeration.PMFM_ID_SORTING_TYPE_2, + enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED, + null, + (short) 3 + ); + } + + public SortingBatch getOrCreateHorsVracBatch(CatchBatch batch) { + return getOrCreate( + batch, + batch, + "Hors Vrac", + enumeration.PMFM_ID_SORTED_UNSORTED, + enumeration.QUALITATIVE_HORS_VRAC_ID, + null, + (short) 2 + ); + } + + public SortingBatch getOrCreateSpeciesHorsVracRootBatch(CatchBatch target, + SortingBatch batch) { + return getOrCreate( + target, + batch, + "Hors Vrac > Species", + enumeration.PMFM_ID_SORTING_TYPE, + enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, + null, + (short) 1 + ); + } + + public SortingBatch getOrCreateBenthosHorsVracRootBatch(CatchBatch target, + SortingBatch batch) { + return getOrCreate( + target, + batch, + "Hors Vrac > Benthos", + enumeration.PMFM_ID_SORTING_TYPE, + enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS, + null, + (short) 2 + ); + } + + public SortingBatch getOrCreateMarineLitterRootBatch(CatchBatch target, + SortingBatch batch, + Float totalWeight) { + return getOrCreate( + target, + batch, + "Hors Vrac > Marine Litter", + enumeration.PMFM_ID_SORTING_TYPE, + enumeration.QUALITATIVE_ID_SORTING_TYPE_MARINE_LITTER, + totalWeight, + (short) 3 + ); + } + + public SortingBatch getOrCreateRejectedBatch(CatchBatch batch, + Float weight) { + + return getOrCreate( + batch, + batch, + "Unsorted", + enumeration.PMFM_ID_SORTED_UNSORTED, + enumeration.QUALITATIVE_UNSORTED_ID, + weight, + (short) 3 + ); + } + + //------------------------------------------------------------------------// + //-- Internal methods --// + //------------------------------------------------------------------------// + + protected SortingBatch get(Batch parentBatch, + Integer sortingPmfmId, + Integer sortingQualitativeValueId) { + SortingBatch result = getSortingBatch( + parentBatch, + null, + sortingPmfmId, + sortingQualitativeValueId); + return result; + } + + protected SortingBatch getSortingBatch(Batch source, + String debugMessage, + Integer... ids) { + + return getSortingBatch(source.getChildBatchs(), debugMessage, ids); + } + + protected SortingBatch getSortingBatch(Collection<Batch> childs, + String debugMessage, + Integer... ids) { + + int nbParams = ids.length / 2; + + Object[] params = new Object[nbParams * 3]; + for (int i = 0; i < nbParams; i++) { + Integer sortingPmfmId = ids[2 * i]; + Integer sortingQualitativeValueId = ids[2 * i + 1]; + params[3 * i] = CatchBatchExtendDao.PMFM_ID; + params[3 * i + 1] = sortingPmfmId; + params[3 * i + 2] = sortingQualitativeValueId; + } + SortingBatch result = catchBatchDao.getSortingBatch(childs, params); + if (result != null && debugMessage != null && log.isDebugEnabled()) { + log.debug("Loaded " + debugMessage + ": " + result.getId()); + } + return result; + } + + protected SortingBatch getOrCreate(fr.ifremer.adagio.core.dao.data.batch.CatchBatch rootBatch, + Batch batch, + String debugMessage, + Integer sortingPmfmId, + Integer sortingQualitativeValueId, + Float totalWeight, + short rankOrder) { + return getOrCreate( + rootBatch, + batch, + debugMessage, + sortingPmfmId, + sortingQualitativeValueId, + totalWeight, + null, + rankOrder + ); + } + + protected SortingBatch getOrCreate(fr.ifremer.adagio.core.dao.data.batch.CatchBatch rootBatch, + Batch batch, + String debugMessage, + Integer sortingPmfmId, + Integer sortingQualitativeValueId, + Float weight, + Float weightBeforeSampling, + short rankOrder) { + SortingBatch result = getSortingBatch( + batch, + debugMessage, + sortingPmfmId, + sortingQualitativeValueId); + + if (result == null) { + + result = SortingBatch.Factory.newInstance(); + if (batch.getChildBatchs() == null) { + batch.setChildBatchs(Sets.<Batch>newHashSet()); + } + batch.getChildBatchs().add(result); + + Collection<SortingMeasurement> sortingMeasurements = result.getSortingMeasurements(); + + // Create lists to store all updates, then remove not updated items + Set<SortingMeasurement> notChangedSortingMeasurements = Sets.newHashSet(); + if (sortingMeasurements != null) { + notChangedSortingMeasurements.addAll(sortingMeasurements); + } + + // Some mandatory properties : + QualityFlagImpl qualityFlag = load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED); + result.setQualityFlag(qualityFlag); + result.setRootBatch(rootBatch); + result.setParentBatch(batch); + result.setExhaustiveInventory(true); + + // No taxon or taxon group + result.setReferenceTaxon(null); + result.setTaxonGroup(null); + + result.setRankOrder(rankOrder); + + // Sorting measurement + if (sortingPmfmId != null && sortingQualitativeValueId != null) { + SortingMeasurement sm = measurementPersistenceHelper.setSortingMeasurement( + result, + sortingPmfmId, + sortingQualitativeValueId); + notChangedSortingMeasurements.remove(sm); + } + // Removed not changed sorting measurements + if (sortingMeasurements != null) { + sortingMeasurements.removeAll(notChangedSortingMeasurements); + } + + catchBatchDao.createSortingBatch(result, rootBatch); + } + + Collection<QuantificationMeasurement> quantificationMeasurements = result.getQuantificationMeasurements(); + Set<QuantificationMeasurement> notChangedQuantificationMeasurements = Sets.newHashSet(); + if (quantificationMeasurements != null) { + notChangedQuantificationMeasurements.addAll(quantificationMeasurements); + } + + // Sampling Ratio + if (weightBeforeSampling == null || weight == null) { + result.setSamplingRatio(null); + result.setSamplingRatioText(null); + } else { + String samplingRatioText = weight + "/" + weightBeforeSampling; + samplingRatioText = samplingRatioText.replaceAll(",", "."); + result.setSamplingRatioText(samplingRatioText); + result.setSamplingRatio(weight / weightBeforeSampling); + } + + // Weight + if (weightBeforeSampling != null || weight != null) { + Float batchReferenceWeight = weight; + if (batchReferenceWeight == null) { + batchReferenceWeight = weightBeforeSampling; + } + QuantificationMeasurement quantificationMeasurement = measurementPersistenceHelper.setWeightMeasurementQuantificationMeasurement( + result, + batchReferenceWeight); + notChangedQuantificationMeasurements.remove(quantificationMeasurement); + } + // Removed not changed quantification measurements + if (quantificationMeasurements != null) { + quantificationMeasurements.removeAll(notChangedQuantificationMeasurements); + } + + return result; + } + + //------------------------------------------------------------------------// + //-- Debug methods --// + //------------------------------------------------------------------------// + + public void displayCatchBatch(CatchBatch result) { + StringBuilder sb = new StringBuilder(); + displayBatch(result, 0, sb); + if (log.isDebugEnabled()) { + log.debug(sb.toString()); + } + } + + protected void displayBatch(Batch batch, int level, StringBuilder sb) { + + ToStringStyle style = new BatchTreeToStringStyle(); + + ToStringBuilder builder = new ToStringBuilder(batch, style); + builder.append("id", batch.getId()); + builder.append("rankOrder", batch.getRankOrder()); +// builder.append("level", level); +// if (batch.getParentBatch() != null) { +// builder.append("parentId", batch.getParentBatch().getId()); +// } + + if (batch instanceof CatchBatch) { + CatchBatch catchBatch = (CatchBatch) batch; + builder.append("synchronizationStatus", catchBatch.getSynchronizationStatus()); + } + if (batch instanceof SortingBatch) { + SortingBatch sortingBatch = (SortingBatch) batch; + if (sortingBatch.getSamplingRatio() != null) { + builder.append("samplingRatio", sortingBatch.getSamplingRatio()); + } + if (sortingBatch.getSamplingRatioText() != null) { + builder.append("samplingRatioText", sortingBatch.getSamplingRatioText()); + } + if (sortingBatch.getIndividualCount() != null) { + builder.append("individualCount", sortingBatch.getIndividualCount()); + } + if (sortingBatch.getReferenceTaxon() != null) { + ReferenceTaxon referenceTaxon = sortingBatch.getReferenceTaxon(); + builder.append("referenceTaxon", load(ReferenceTaxonImpl.class, referenceTaxon.getId()).getName()); + } + + SortingMeasurement sm = null; + if (sortingBatch.getSortingMeasurements() != null && sortingBatch.getSortingMeasurements().size() == 1) { + sm = sortingBatch.getSortingMeasurements().iterator().next(); + } else if (sortingBatch.getReferenceTaxon() != null && sortingBatch.getReferenceTaxon().getId() != null) { + sm = measurementPersistenceHelper.getInheritedSortingMeasurement(sortingBatch); + } + if (sm != null) { + String sortingMeasurementStr = measurementPersistenceHelper.toString(sm); + builder.append("sortingMeasurement", sortingMeasurementStr); + } + } + QuantificationMeasurement quantificationMeasurement = measurementPersistenceHelper.getWeightMeasurementQuantificationMeasurement(batch); + if (quantificationMeasurement != null) { + String quantificationMeasurementStr = measurementPersistenceHelper.toString(quantificationMeasurement); + builder.append("weightQuantificationMeasurement", quantificationMeasurementStr); + builder.append("weightQuantificationMeasurement.isReferenceQuantification", quantificationMeasurement.getIsReferenceQuantification()); + } + if (batch.getWeight() != null) { + builder.append("weight", batch.getWeight()); + } + if (batch.getWeightBeforeSampling() != null) { + builder.append("weightBeforeSampling", batch.getWeightBeforeSampling()); + } + builder.append("qualityFlag", load(QualityFlagImpl.class, batch.getQualityFlag().getCode()).getName()); + + String prefix = "\n" + StringUtils.leftPad("", 2 * level); + String batchStr = Joiner.on(prefix).join(builder.build().split("\n")); + sb.append(prefix).append(batchStr); + Collection<Batch> childBatchs = batch.getChildBatchs(); + if (childBatchs != null) { + List<Batch> childBatchList = new ArrayList<>(childBatchs); + Collections.sort(childBatchList, batchComparator); + for (Batch childBatch : childBatchList) { + displayBatch(childBatch, level + 1, sb); + } + } + } + + + static final class BatchTreeToStringStyle extends ToStringStyle { + + private static final long serialVersionUID = 1L; + + BatchTreeToStringStyle() { + super(); + this.setUseClassName(true); + this.setUseShortClassName(true); + this.setContentStart(""); + this.setFieldSeparator(SystemUtils.LINE_SEPARATOR + " | "); + this.setFieldSeparatorAtStart(true); + this.setContentEnd(""); + } + } +} Copied: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/MeasurementPersistenceHelper.java (from rev 1722, trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MeasurementPersistenceHelper.java) =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/MeasurementPersistenceHelper.java (rev 0) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/MeasurementPersistenceHelper.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -0,0 +1,374 @@ +package fr.ifremer.tutti.persistence.service.util; + +/* + * #%L + * Tutti :: Persistence + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + +import com.google.common.base.Preconditions; +import com.google.common.collect.Sets; +import fr.ifremer.adagio.core.dao.data.batch.Batch; +import fr.ifremer.adagio.core.dao.data.batch.CatchBatchExtendDao; +import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; +import fr.ifremer.adagio.core.dao.data.measure.GearUseMeasurement; +import fr.ifremer.adagio.core.dao.data.measure.Measurement; +import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; +import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; +import fr.ifremer.adagio.core.dao.data.measure.SurveyMeasurement; +import fr.ifremer.adagio.core.dao.data.measure.VesselUseMeasurement; +import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; +import fr.ifremer.adagio.core.dao.data.survey.scientificCruise.ScientificCruise; +import fr.ifremer.adagio.core.dao.data.vessel.feature.use.GearUseFeatures; +import fr.ifremer.adagio.core.dao.data.vessel.feature.use.VesselUseFeatures; +import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; +import fr.ifremer.adagio.core.dao.referential.pmfm.Pmfm; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmImpl; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValue; +import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueImpl; +import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; +import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; +import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; +import fr.ifremer.tutti.persistence.service.ReferentialPersistenceService; +import org.springframework.stereotype.Component; + +import javax.annotation.Resource; +import java.io.Serializable; + +/** + * Helper around {@link Measurement}. + * + * @author tchemit <chemit(a)codelutin.com> + * @since 2.0 + */ +@Component("measurementPersistenceHelper") +public class MeasurementPersistenceHelper extends AbstractPersistenceService { + + @Resource(name = "referentialPersistenceService") + protected ReferentialPersistenceService referentialService; + + @Resource(name = "catchBatchDao") + protected CatchBatchExtendDao catchBatchDao; + + public void setMeasurement(Measurement measurement, + Caracteristic caracteristic, + Serializable value) { + if (value == null) { + return; + } + switch (caracteristic.getCaracteristicType()) { + + case NUMBER: + measurement.setNumericalValue((Float) value); + break; + case QUALITATIVE: + Integer qvId = null; + if (value instanceof CaracteristicQualitativeValue) { + qvId = Integer.valueOf(((CaracteristicQualitativeValue) value).getId()); + } else if (value instanceof Integer) { + qvId = (Integer) value; + } + QualitativeValue qv = load(QualitativeValueImpl.class, qvId); + measurement.setQualitativeValue(qv); + break; + case TEXT: + measurement.setAlphanumericalValue((String) value); + break; + } + } + + //------------------------------------------------------------------------// + //-- SortingMeasurement --// + //------------------------------------------------------------------------// + + public SortingMeasurement setSortingMeasurement( + SortingBatch sortingBatch, + Integer pmfmId, + Serializable value) { + Preconditions.checkNotNull(pmfmId); + Preconditions.checkNotNull(value); + + Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); + SortingMeasurement sortingMeasurement = catchBatchDao.getSortingMeasurement( + sortingBatch, pmfmId, getRecorderDepartmentId(), true); + setMeasurement(sortingMeasurement, + caracteristic, + value); + return sortingMeasurement; + } + + public QuantificationMeasurement setWeightMeasurementQuantificationMeasurement(Batch batch, Float weightValue) { + return catchBatchDao.setQuantificationMeasurement(batch, enumeration.PMFM_ID_WEIGHT_MEASURED, getRecorderDepartmentId(), weightValue, true); + } + + public QuantificationMeasurement getWeightMeasurementQuantificationMeasurement(Batch batch) { + QuantificationMeasurement quantificationMeasurement = catchBatchDao.getQuantificationMeasurement(batch, enumeration.PMFM_ID_WEIGHT_MEASURED, getRecorderDepartmentId(), false); + return quantificationMeasurement; + } + + public SortingMeasurement getInheritedSortingMeasurement(SortingBatch sortingBatch) { + return catchBatchDao.getInheritedSortingMeasurement(sortingBatch, enumeration.PMFM_ID_SORTED_UNSORTED); + } + + //------------------------------------------------------------------------// + //-- VesselUseUseMeasurement --// + //------------------------------------------------------------------------// + + public VesselUseMeasurement setVesselUseMeasurement(ScientificCruise scientificCruise, VesselUseFeatures vesselUseFeatures, + Integer pmfmId, + Float numericalValue, + String alphanumericalValue, + Integer qualitativevalueId) { + VesselUseMeasurement vesselUseMeasurement = getVesselUseMeasurement(scientificCruise, vesselUseFeatures, pmfmId, true); + + if (alphanumericalValue != null) { + vesselUseMeasurement.setAlphanumericalValue(alphanumericalValue); + } else if (numericalValue != null) { + vesselUseMeasurement.setNumericalValue(numericalValue); + } else if (qualitativevalueId != null) { + vesselUseMeasurement.setQualitativeValue(load(QualitativeValueImpl.class, qualitativevalueId)); + } + + return vesselUseMeasurement; + } + + public VesselUseMeasurement setVesselUseMeasurement(ScientificCruise scientificCruise, VesselUseFeatures vesselUseFeatures, + Caracteristic caracteristic, Serializable value) { + VesselUseMeasurement vesselUseMeasurement = getVesselUseMeasurement(scientificCruise, vesselUseFeatures, Integer.valueOf(caracteristic.getId()), true); + setMeasurement(vesselUseMeasurement, caracteristic, value); + return vesselUseMeasurement; + } + + public VesselUseMeasurement getVesselUseMeasurement(ScientificCruise scientificCruise, VesselUseFeatures vesselUseFeatures, + Integer pmfmId, boolean createIfNotExists) { + VesselUseMeasurement vesselUseMeasurement = null; + if (vesselUseFeatures.getVesselUseMeasurements() != null) { + for (VesselUseMeasurement vum : vesselUseFeatures.getVesselUseMeasurements()) { + if (pmfmId.equals(vum.getPmfm().getId())) { + vesselUseMeasurement = vum; + break; + } + } + } + if (vesselUseMeasurement == null) { + if (!createIfNotExists) { + return null; + } + vesselUseMeasurement = VesselUseMeasurement.Factory.newInstance(); + vesselUseMeasurement.setVesselUseFeatures(vesselUseFeatures); + if (vesselUseFeatures.getVesselUseMeasurements() == null) { + vesselUseFeatures.setVesselUseMeasurements(Sets.newHashSet(vesselUseMeasurement)); + } else { + vesselUseFeatures.getVesselUseMeasurements().add(vesselUseMeasurement); + } + vesselUseMeasurement.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + vesselUseMeasurement.setDepartment(scientificCruise.getRecorderDepartment()); + vesselUseMeasurement.setPmfm(load(PmfmImpl.class, pmfmId)); + } + + return vesselUseMeasurement; + } + + protected VesselUseMeasurement setVesselUseMeasurement(ScientificCruise scientificCruise, VesselUseFeatures vesselUseFeatures, + Integer pmfmId, + Serializable value) { + VesselUseMeasurement vesselUseMeasurement = getVesselUseMeasurement(scientificCruise, vesselUseFeatures, pmfmId, true); + + if (value instanceof String) { + vesselUseMeasurement.setAlphanumericalValue((String) value); + } else if (value instanceof Float) { + vesselUseMeasurement.setNumericalValue((Float) value); + } else if (value instanceof Integer) { + vesselUseMeasurement.setQualitativeValue(load(QualitativeValueImpl.class, value)); + } + + return vesselUseMeasurement; + } + + //------------------------------------------------------------------------// + //-- GearUseMeasurement --// + //------------------------------------------------------------------------// + + public GearUseMeasurement setGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, + Integer pmfmId, + Float numericalValue, + String alphanumericalValue, + Integer qualitativevalueId) { + GearUseMeasurement gearUseMeasurement = getGearUseMeasurement(scientificCruise, gearUseFeatures, pmfmId, true); + + if (alphanumericalValue != null) { + gearUseMeasurement.setAlphanumericalValue(alphanumericalValue); + } else if (numericalValue != null) { + gearUseMeasurement.setNumericalValue(numericalValue); + } else if (qualitativevalueId != null) { + QualitativeValue qv = load(QualitativeValueImpl.class, qualitativevalueId); + gearUseMeasurement.setQualitativeValue(qv); + } + + return gearUseMeasurement; + } + + public GearUseMeasurement setGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, + Caracteristic caracteristic, Serializable value) { + GearUseMeasurement gearUseMeasurement = getGearUseMeasurement(scientificCruise, gearUseFeatures, Integer.valueOf(caracteristic.getId()), true); + setMeasurement(gearUseMeasurement, caracteristic, value); + return gearUseMeasurement; + } + + protected GearUseMeasurement getGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, + Integer pmfmId, boolean createIfNotExists) { + GearUseMeasurement gearUseMeasurement = null; + if (gearUseFeatures.getGearUseMeasurements() != null) { + for (GearUseMeasurement vum : gearUseFeatures.getGearUseMeasurements()) { + if (pmfmId.equals(vum.getPmfm().getId())) { + gearUseMeasurement = vum; + break; + } + } + } + if (gearUseMeasurement == null) { + if (!createIfNotExists) { + return null; + } + gearUseMeasurement = GearUseMeasurement.Factory.newInstance(); + gearUseMeasurement.setGearUseFeatures(gearUseFeatures); + if (gearUseFeatures.getGearUseMeasurements() == null) { + gearUseFeatures.setGearUseMeasurements(Sets.newHashSet(gearUseMeasurement)); + } else { + gearUseFeatures.getGearUseMeasurements().add(gearUseMeasurement); + } + gearUseMeasurement.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + gearUseMeasurement.setDepartment(scientificCruise.getRecorderDepartment()); + Pmfm pmfm = (Pmfm) getCurrentSession().load(PmfmImpl.class, pmfmId); + gearUseMeasurement.setPmfm(pmfm); + } + + return gearUseMeasurement; + } + + + //------------------------------------------------------------------------// + //-- Misc --// + //------------------------------------------------------------------------// + + public String toString(Measurement measurement) { + Pmfm pmfm = load(PmfmImpl.class, measurement.getPmfm().getId()); + String value = null; + if (measurement.getQualitativeValue() != null) { + QualitativeValue qualitativeValue = measurement.getQualitativeValue(); + String qualitativeName = load(QualitativeValueImpl.class, qualitativeValue.getId()).getName(); + + value = qualitativeName + " (" + qualitativeValue.getId() + ")"; + } else if (measurement.getNumericalValue() != null) { + value = "" + measurement.getNumericalValue(); + } else if (measurement.getAlphanumericalValue() != null) { + value = measurement.getAlphanumericalValue(); + } + return pmfm.getParameter().getName() + " (" + pmfm.getId() + ") / " + value; + } + + //------------------------------------------------------------------------// + //-- SurveyMeasurement --// + //------------------------------------------------------------------------// + + public SurveyMeasurement setSurveyMeasurement(FishingTrip fishingTrip, + Integer pmfmId, + Float numericalValue, + String alphanumericalValue, + Integer qualitativevalueId) { + SurveyMeasurement result = getSurveyMeasurement(fishingTrip, pmfmId); + + if (result == null) { + result = createSurveyMeasurement(fishingTrip, + pmfmId, + numericalValue, + alphanumericalValue, + qualitativevalueId); + } + + return result; + } + + public SurveyMeasurement removeSurveyMeasurement(FishingTrip fishingTrip, + Integer pmfmId) { + SurveyMeasurement result = getSurveyMeasurement(fishingTrip, pmfmId); + + if (result != null) { + + // measurement found, remove it + result.setFishingTrip(null); + fishingTrip.getSurveyMeasurements().remove(result); + } + + return result; + } + + protected SurveyMeasurement createSurveyMeasurement(FishingTrip fishingTrip, + Integer pmfmId, + Float numericalValue, + String alphanumericalValue, + Integer qualitativevalueId) { + + SurveyMeasurement result = SurveyMeasurement.Factory.newInstance(); + result.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + result.setDepartment(fishingTrip.getRecorderDepartment()); + Pmfm pmfm = load(PmfmImpl.class, pmfmId); + result.setPmfm(pmfm); + result.setFishingTrip(fishingTrip); + + if (alphanumericalValue != null) { + result.setAlphanumericalValue(alphanumericalValue); + } else if (numericalValue != null) { + result.setNumericalValue(numericalValue); + } else if (qualitativevalueId != null) { + result.setQualitativeValue(load(QualitativeValueImpl.class, qualitativevalueId)); + } + + // add it to fishingTrip + if (fishingTrip.getSurveyMeasurements() == null) { + + //create new set of measurements + fishingTrip.setSurveyMeasurements(Sets.<SurveyMeasurement>newHashSet()); + } + + fishingTrip.getSurveyMeasurements().add(result); + + return result; + } + + protected SurveyMeasurement getSurveyMeasurement(FishingTrip fishingTrip, Integer pmfmId) { + SurveyMeasurement result = null; + + for (SurveyMeasurement vum : fishingTrip.getSurveyMeasurements()) { + if (pmfmId.equals(vum.getPmfm().getId())) { + result = vum; + break; + } + } + + return result; + } + + protected Integer getRecorderDepartmentId() { + // TODO BL : voir si on peut récupérer le departement (du 1er saisisseur ?) + return enumeration.DEPARTMENT_ID_UNKNOWN_RECORDER_DEPARTMENT; + } +} Copied: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/SamplePersistenceHelper.java (from rev 1718, trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SamplePersistenceHelper.java) =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/SamplePersistenceHelper.java (rev 0) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/SamplePersistenceHelper.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -0,0 +1,180 @@ +package fr.ifremer.tutti.persistence.service.util; + +/* + * #%L + * Tutti :: Persistence + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + +import com.google.common.collect.Sets; +import fr.ifremer.adagio.core.dao.data.measure.SampleMeasurement; +import fr.ifremer.adagio.core.dao.data.sample.Sample; +import fr.ifremer.adagio.core.dao.data.sample.SampleDao; +import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmImpl; +import fr.ifremer.tutti.persistence.entities.CaracteristicMap; +import fr.ifremer.tutti.persistence.entities.TuttiEntities; +import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; +import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; +import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; +import fr.ifremer.tutti.persistence.service.AttachmentPersistenceService; +import fr.ifremer.tutti.persistence.service.ReferentialPersistenceService; +import org.hibernate.type.IntegerType; +import org.springframework.stereotype.Component; + +import javax.annotation.Resource; +import java.io.Serializable; +import java.util.Iterator; +import java.util.Set; + +/** + * Helper around {@link Sample}. + * + * @author tchemit <chemit(a)codelutin.com> + * @since 1.6 + */ +@Component("samplePersistenceHelper") +public class SamplePersistenceHelper extends AbstractPersistenceService { + + @Resource(name = "referentialPersistenceService") + protected ReferentialPersistenceService referentialService; + + @Resource(name = "measurementPersistenceHelper") + protected MeasurementPersistenceHelper measurementPersistenceHelper; + + @Resource(name = "attachmentPersistenceService") + protected AttachmentPersistenceService attachmentPersistenceService; + + @Resource(name = "sampleDao") + protected SampleDao sampleDao; + + public Sample create(Sample sample) { + return sampleDao.create(sample); + } + + public void update(Sample sample) { + sampleDao.update(sample); + } + + public Sample load(Integer id) { + return sampleDao.load(id); + } + + public void deleteSample(Integer sampleId) { + + Sample sample = sampleDao.load(sampleId); + if (sample != null) { + sample.getSampleMeasurements().clear(); + sampleDao.remove(sample); + attachmentPersistenceService.deleteAllAttachment( + AttachementObjectTypeEnum.SAMPLE, + sampleId); + } + } + + public void setSampleMeasurements(Sample target, + CaracteristicMap caracteristics) { + + Set<SampleMeasurement> notChangedSampleMeasurements = Sets.newHashSet(); + if (target.getSampleMeasurements() != null) { + notChangedSampleMeasurements.addAll(target.getSampleMeasurements()); + } + + for (Caracteristic caracteristic : caracteristics.keySet()) { + SampleMeasurement vum = setSampleMeasurement( + target, + caracteristic, + caracteristics.get(caracteristic)); + notChangedSampleMeasurements.remove(vum); + } + + if (target.getSampleMeasurements() != null && + notChangedSampleMeasurements.size() > 0) { + target.getSampleMeasurements().removeAll(notChangedSampleMeasurements); + } + } + + public void fillSampleMeasurements(CaracteristicMap result, + Integer sampleId) { + Iterator<Object[]> list = queryList( + "sampleMeasurements", + "sampleId", IntegerType.INSTANCE, sampleId); + while (list.hasNext()) { + int colIndex = 0; + Object[] source = list.next(); + Integer pmfmId = (Integer) source[colIndex++]; + Float numericalValue = (Float) source[colIndex++]; + String alphanumericalValue = (String) source[colIndex++]; + Integer qualitativeValueId = (Integer) source[colIndex]; + + Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); + Serializable value = null; + switch (caracteristic.getCaracteristicType()) { + + case NUMBER: + value = numericalValue; + break; + case QUALITATIVE: + value = TuttiEntities.getQualitativeValue(caracteristic, + qualitativeValueId); + break; + case TEXT: + value = alphanumericalValue; + break; + } + result.put(caracteristic, value); + } + } + + protected SampleMeasurement setSampleMeasurement(Sample sample, + Caracteristic caracteristic, + Serializable value) { + + Integer pmfmId = caracteristic.getIdAsInt(); + + SampleMeasurement result = null; + if (sample.getSampleMeasurements() != null) { + for (SampleMeasurement vum : sample.getSampleMeasurements()) { + if (pmfmId.equals(vum.getPmfm().getId())) { + result = vum; + break; + } + } + } + if (result == null) { + + result = SampleMeasurement.Factory.newInstance(); + + result.setSample(sample); + if (sample.getSampleMeasurements() == null) { + sample.setSampleMeasurements(Sets.newHashSet(result)); + } else { + sample.getSampleMeasurements().add(result); + } + result.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + result.setDepartment(sample.getRecorderDepartment()); + result.setPmfm(load(PmfmImpl.class, pmfmId)); + } + measurementPersistenceHelper.setMeasurement(result, caracteristic, value); + return result; + } + +} Copied: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/SynchronizationStatusHelper.java (from rev 1722, trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SynchronizationStatusHelper.java) =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/SynchronizationStatusHelper.java (rev 0) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/SynchronizationStatusHelper.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -0,0 +1,86 @@ +package fr.ifremer.tutti.persistence.service.util; + +import fr.ifremer.adagio.core.dao.data.batch.Batch; +import fr.ifremer.adagio.core.dao.data.batch.CatchBatch; +import fr.ifremer.adagio.core.dao.data.sample.Sample; +import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; +import fr.ifremer.adagio.core.dao.data.survey.scientificCruise.ScientificCruise; +import fr.ifremer.adagio.core.dao.technical.synchronization.SynchronizationStatus; +import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; +import org.hibernate.type.IntegerType; +import org.hibernate.type.StringType; +import org.springframework.stereotype.Component; + +/** + * Helper around SynchronizationStatus. + * + * Created on 4/22/14. + * + * @author Tony Chemit <chemit(a)codelutin.com> + * @since 3.5 + */ +@Component("synchronizationStatusHelper") +public class SynchronizationStatusHelper extends AbstractPersistenceService { + + public void setDirty(ScientificCruise scientificCruise) { + String synchronizationStatus = getDirtyValue(); + scientificCruise.setSynchronizationStatus(synchronizationStatus); + } + + public void setDirty(FishingTrip fishingTrip) { + String synchronizationStatus = getDirtyValue(); + fishingTrip.setSynchronizationStatus(synchronizationStatus); + setDirty(fishingTrip.getScientificCruise()); + } + + public void setDirty(CatchBatch catchBatch) { + String synchronizationStatus = getDirtyValue(); + catchBatch.setSynchronizationStatus(synchronizationStatus); + setDirty(catchBatch.getFishingOperation().getFishingTrip()); + } + + public void setDirty(Sample sample) { + String synchronizationStatus = getDirtyValue(); + sample.setSynchronizationStatus(synchronizationStatus); + Batch batch = sample.getBatch(); + if (batch != null && batch instanceof CatchBatch) { + setDirty((CatchBatch) batch); + } else { + setDirty(sample.getFishingOperation().getFishingTrip()); + } + } + + public void setReadyToSynch(String cruiseId) { + + String oldStatus = getDirtyValue(); + String newStatus = SynchronizationStatus.READY_TO_SYNCHRONIZE.getValue(); + + // update scientificCruise + queryUpdate("updateScientificCruiseSynchronizationStatus", + "cruiseId", IntegerType.INSTANCE, cruiseId, + "oldStatus", StringType.INSTANCE, oldStatus, + "newStatus", StringType.INSTANCE, newStatus); + + // update fishingTrip + queryUpdate("updateFishingTripSynchronizationStatus", + "cruiseId", IntegerType.INSTANCE, cruiseId, + "oldStatus", StringType.INSTANCE, oldStatus, + "newStatus", StringType.INSTANCE, newStatus); + + // update catchBatch + queryUpdate("updateCatchBatchSynchronizationStatus", + "cruiseId", IntegerType.INSTANCE, cruiseId, + "oldStatus", StringType.INSTANCE, oldStatus, + "newStatus", StringType.INSTANCE, newStatus); + + // update sample + queryUpdate("updateSampleSynchronizationStatus", + "cruiseId", IntegerType.INSTANCE, cruiseId, + "oldStatus", StringType.INSTANCE, oldStatus, + "newStatus", StringType.INSTANCE, newStatus); + } + + protected String getDirtyValue() { + return SynchronizationStatus.DIRTY.getValue(); + } +} Copied: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/VesselPersonFeaturesPersistenceHelper.java (from rev 1718, trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/VesselPersonFeaturesPersistenceHelper.java) =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/VesselPersonFeaturesPersistenceHelper.java (rev 0) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/util/VesselPersonFeaturesPersistenceHelper.java 2014-04-23 08:11:03 UTC (rev 1723) @@ -0,0 +1,154 @@ +package fr.ifremer.tutti.persistence.service.util; + +/* + * #%L + * Tutti :: Persistence + * $Id$ + * $HeadURL$ + * %% + * Copyright (C) 2012 - 2013 Ifremer + * %% + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program. If not, see + * <http://www.gnu.org/licenses/gpl-3.0.html>. + * #L% + */ + +import fr.ifremer.adagio.core.dao.administration.user.Person; +import fr.ifremer.adagio.core.dao.administration.user.PersonImpl; +import fr.ifremer.adagio.core.dao.data.operation.FishingOperation; +import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; +import fr.ifremer.adagio.core.dao.data.vessel.feature.person.VesselPersonFeatures; +import fr.ifremer.adagio.core.dao.referential.VesselPersonRole; +import fr.ifremer.adagio.core.dao.referential.VesselPersonRoleImpl; +import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; +import org.springframework.stereotype.Component; + +import java.util.Date; +import java.util.Map; + +/** + * Helper around {@link VesselPersonFeatures}. + * + * @author tchemit <chemit(a)codelutin.com> + * @since 2.0 + */ +@Component("vesselPersonFeaturesPersistenceHelper") +public class VesselPersonFeaturesPersistenceHelper extends AbstractPersistenceService { + + /** Logger. */ + private static final Log log = + LogFactory.getLog(VesselPersonFeaturesPersistenceHelper.class); + + public VesselPersonFeaturesPersistenceHelper() { + } + + public VesselPersonRole getScientificCruiseManagerRole() { + return load(VesselPersonRoleImpl.class, enumeration.VESSEL_PERSON_ROLE_ID_SCIENTIFIC_CRUISE_MANAGER); + } + + public VesselPersonRole getSortRoomManagerRole() { + return load(VesselPersonRoleImpl.class, enumeration.VESSEL_PERSON_ROLE_ID_SORT_ROOM_MANAGER); + } + + public VesselPersonRole getRecorderPersonRole() { + return load(VesselPersonRoleImpl.class, enumeration.VESSEL_PERSON_ROLE_ID_RECORDER_PERSON); + } + + public void fillVesselPersonFeatures(Map<Integer, VesselPersonFeatures> vesselPersonFeaturesPerPerson, + Integer personId, + FishingTrip fishingTrip, + VesselPersonRole role, + short rankOrder) { + + VesselPersonFeatures vesselPersonFeatures = + vesselPersonFeaturesPerPerson.get(personId); + if (vesselPersonFeatures == null) { + + PersonImpl person = load(PersonImpl.class, personId); + + if (log.isDebugEnabled()) { + log.debug("Create an new vesselPersonFeatures for person: [" + personId + "]" + person.getFirstname() + " - " + person.getLastname()); + } + + vesselPersonFeatures = VesselPersonFeatures.Factory.newInstance(); + vesselPersonFeaturesPerPerson.put(personId, vesselPersonFeatures); + vesselPersonFeatures.setPerson(person); + + vesselPersonFeatures.setFishingTrip(fishingTrip); + vesselPersonFeatures.setStartDate(fishingTrip.getDepartureDateTime()); + vesselPersonFeatures.setEndDate(fishingTrip.getReturnDateTime()); + vesselPersonFeatures.setVessel(fishingTrip.getVessel()); + vesselPersonFeatures.setProgram(fishingTrip.getProgram()); + + vesselPersonFeatures.setCreationDate(fishingTrip.getCreationDate()); + vesselPersonFeatures.setQualityFlag(fishingTrip.getQualityFlag()); + vesselPersonFeatures.setRankOrder(rankOrder); + } + + addRole(role, vesselPersonFeatures); + } + + public void fillVesselPersonFeatures(Map<Integer, VesselPersonFeatures> vesselPersonFeaturesPerPerson, + Integer personId, + FishingOperation fishingOperation, + VesselPersonRole role, + short rankOrder) { + + VesselPersonFeatures vesselPersonFeatures = + vesselPersonFeaturesPerPerson.get(personId); + if (vesselPersonFeatures == null) { + + PersonImpl person = load(PersonImpl.class, personId); + if (log.isDebugEnabled()) { + log.debug("Create an new vesselPersonFeatures for person: [" + personId + "]" + person.getFirstname() + " - " + person.getLastname()); + } + + vesselPersonFeatures = VesselPersonFeatures.Factory.newInstance(); + vesselPersonFeaturesPerPerson.put(personId, vesselPersonFeatures); + vesselPersonFeatures.setOperation(fishingOperation); + vesselPersonFeatures.setFishingTrip(fishingOperation.getFishingTrip()); + vesselPersonFeatures.setPerson(person); + vesselPersonFeatures.setStartDate(fishingOperation.getStartDateTime()); + vesselPersonFeatures.setEndDate(fishingOperation.getEndDateTime()); + vesselPersonFeatures.setVessel(fishingOperation.getVessel()); + vesselPersonFeatures.setProgram(fishingOperation.getFishingTrip().getProgram()); + + vesselPersonFeatures.setCreationDate(new Date()); + vesselPersonFeatures.setQualityFlag(fishingOperation.getQualityFlag()); + vesselPersonFeatures.setRankOrder(rankOrder); + } + + addRole(role, vesselPersonFeatures); + } + + protected void addRole(VesselPersonRole role, + VesselPersonFeatures vesselPersonFeatures) { + Person person = vesselPersonFeatures.getPerson(); + if (vesselPersonFeatures.getVesselPersonRoles().contains(role)) { + if (log.isWarnEnabled()) { + log.warn("vessel person feature for person: " + person.getId() + " with role: " + role.getName() + " already exist, do not add it twice."); + } + } else { + + // add this new role + if (log.isInfoEnabled()) { + log.info("Add vessel person feature for person: " + person.getId() + " with role: " + role.getName()); + } + vesselPersonFeatures.getVesselPersonRoles().add(role); + + } + } +} \ No newline at end of file Modified: trunk/tutti-ui-swing/src/main/filtered-resources/log4j.properties =================================================================== --- trunk/tutti-ui-swing/src/main/filtered-resources/log4j.properties 2014-04-22 22:43:02 UTC (rev 1722) +++ trunk/tutti-ui-swing/src/main/filtered-resources/log4j.properties 2014-04-23 08:11:03 UTC (rev 1723) @@ -31,7 +31,7 @@ # tutti levels log4j.logger.fr.ifremer=INFO -log4j.logger.fr.ifremer.tutti.persistence.service.batch.BatchTreeHelper=DEBUG +log4j.logger.fr.ifremer.tutti.persistence.service.util.BatchTreeHelper=DEBUG #See https://forum.hibernate.org/viewtopic.php?p=2404391 log4j.logger.org.hibernate.engine.StatefulPersistenceContext.ProxyWarnLog=ERROR

1 0

r1722 - in trunk: tutti-persistence/src/main/java/fr/ifremer/tutti/persistence tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/data tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch tutti-persistence/src/main/resources tutti-persistence/src/main/xmi tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service tutti-service/src/main/java/fr/ifremer/tutti/service tutti-se
by tchemit＠users.forge.codelutin.com 22 Apr '14

22 Apr '14

Author: tchemit Date: 2014-04-23 00:43:02 +0200 (Wed, 23 Apr 2014) New Revision: 1722 Url: http://forge.codelutin.com/projects/tutti/repository/revisions/1722 Log: refs-70 #4958 (need to validate) clean measurement codes improve some codes Added: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/data/Cruises.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SynchronizationStatusHelper.java Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceNoDbImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AbstractPersistenceService.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AccidentalBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceService.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/IndividualObservationBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MeasurementPersistenceHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceService.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchPersistenceHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchTreeHelper.java trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/ScientificCruiseCatchBatchValidator.java trunk/tutti-persistence/src/main/resources/queries-failsafe.hbm.xml trunk/tutti-persistence/src/main/xmi/tutti-persistence.zargo trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceReadTest.java trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceWriteTest.java trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceReadTest.java trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceWriteTest.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/PersistenceService.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/ValidateCruiseOperationsService.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/WeightCleaningService.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/WeightComputingService.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostExportService.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostImportService.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/export/generic/TuttiExportService.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/psionimport/PsionImportService.java trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriImportExportService.java trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/catches/WeightComputingServiceTest.java trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/psionimport/PsionImportServiceTest.java trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/pupitri/PupitriImportExportServiceTest.java trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/pupitri/PupitriImportServiceTest.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/action/SaveCruiseAction.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/MainUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUI.css trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/accidental/AccidentalBatchRowModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/individualobservation/IndividualObservationBatchRowModel.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIHandler.java trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/TuttiUIUtil.java Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceImpl.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -41,7 +41,6 @@ import fr.ifremer.tutti.persistence.entities.data.IndividualObservationBatch; import fr.ifremer.tutti.persistence.entities.data.MarineLitterBatch; import fr.ifremer.tutti.persistence.entities.data.Program; -import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; import fr.ifremer.tutti.persistence.entities.data.SpeciesAbleBatch; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatch; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatchFrequency; @@ -739,8 +738,8 @@ //------------------------------------------------------------------------// @Override - public BatchContainer<SpeciesBatch> getRootSpeciesBatch(String fishingOperationId, SampleCategoryModel sampleCategoryModel) throws InvalidBatchModelException { - return speciesBatchService.getRootSpeciesBatch(fishingOperationId, sampleCategoryModel); + public BatchContainer<SpeciesBatch> getRootSpeciesBatch(String fishingOperationId, boolean validateTree) throws InvalidBatchModelException { + return speciesBatchService.getRootSpeciesBatch(fishingOperationId, validateTree); } @Override @@ -788,8 +787,8 @@ //------------------------------------------------------------------------// @Override - public BatchContainer<BenthosBatch> getRootBenthosBatch(String fishingOperationId, SampleCategoryModel sampleCategoryModel) throws InvalidBatchModelException { - return benthosBatchService.getRootBenthosBatch(fishingOperationId, sampleCategoryModel); + public BatchContainer<BenthosBatch> getRootBenthosBatch(String fishingOperationId, boolean validateTree) throws InvalidBatchModelException { + return benthosBatchService.getRootBenthosBatch(fishingOperationId, validateTree); } @Override Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceNoDbImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceNoDbImpl.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceNoDbImpl.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -39,7 +39,6 @@ import fr.ifremer.tutti.persistence.entities.data.IndividualObservationBatch; import fr.ifremer.tutti.persistence.entities.data.MarineLitterBatch; import fr.ifremer.tutti.persistence.entities.data.Program; -import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; import fr.ifremer.tutti.persistence.entities.data.SpeciesAbleBatch; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatch; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatchFrequency; @@ -496,7 +495,7 @@ } @Override - public BatchContainer<SpeciesBatch> getRootSpeciesBatch(String fishingOperationId, SampleCategoryModel sampleCategoryModel) throws InvalidBatchModelException { + public BatchContainer<SpeciesBatch> getRootSpeciesBatch(String fishingOperationId, boolean validateTree) throws InvalidBatchModelException { throw notImplemented(); } @@ -541,7 +540,7 @@ } @Override - public BatchContainer<BenthosBatch> getRootBenthosBatch(String fishingOperationId, SampleCategoryModel sampleCategoryModel) throws InvalidBatchModelException { + public BatchContainer<BenthosBatch> getRootBenthosBatch(String fishingOperationId, boolean validateTree) throws InvalidBatchModelException { throw notImplemented(); } Added: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/data/Cruises.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/data/Cruises.java (rev 0) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/data/Cruises.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -0,0 +1,21 @@ +package fr.ifremer.tutti.persistence.entities.data; + +import fr.ifremer.adagio.core.dao.technical.synchronization.SynchronizationStatus; + +public class Cruises extends AbstractCruises { + + public static boolean isDirty(Cruise cruise) { + String synchronizationStatus = cruise.getSynchronizationStatus(); + return SynchronizationStatus.DIRTY.getValue().equals(synchronizationStatus); + } + + public static boolean isReadyToSynch(Cruise cruise) { + String synchronizationStatus = cruise.getSynchronizationStatus(); + return SynchronizationStatus.READY_TO_SYNCHRONIZE.getValue().equals(synchronizationStatus); + } + + public static boolean isSynch(Cruise cruise) { + String synchronizationStatus = cruise.getSynchronizationStatus(); + return SynchronizationStatus.SYNCHRONIZED.getValue().equals(synchronizationStatus); + } +} Property changes on: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/entities/data/Cruises.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision Added: svn:eol-style + native Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AbstractPersistenceService.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AbstractPersistenceService.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AbstractPersistenceService.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -27,6 +27,7 @@ import com.google.common.base.Preconditions; import fr.ifremer.tutti.TuttiConfiguration; import fr.ifremer.tutti.persistence.TuttiPersistenceServiceImplementor; +import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.hibernate.Query; @@ -67,19 +68,20 @@ @Resource(name = "tuttiEnumerationFile") protected TuttiEnumerationFile enumeration; + @Resource(name = "tuttiConfiguration") protected TuttiConfiguration config; @Override public void init() { - if (config == null) { - - config = TuttiConfiguration.getInstance(); - - Preconditions.checkNotNull( - config, "No config found in " + - TuttiConfiguration.class.getName() - ); - } +// if (config == null) { +// +// config = TuttiConfiguration.getInstance(); +// +// Preconditions.checkNotNull( +// config, "No config found in " + +// TuttiConfiguration.class.getName() +// ); +// } } @Override @@ -301,6 +303,11 @@ return result; } + + public SampleCategoryModel getSampleCategoryModel() { + return config.getSampleCategoryModel(); + } + private Calendar calendar = new GregorianCalendar(); Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AccidentalBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AccidentalBatchPersistenceServiceImpl.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AccidentalBatchPersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -73,6 +73,9 @@ @Resource(name = "samplePersistenceHelper") protected SamplePersistenceHelper samplePersistenceHelper; + @Resource(name = "synchronizationStatusHelper") + protected SynchronizationStatusHelper synchronizationStatusHelper; + @Override public List<AccidentalBatch> getAllAccidentalBatch(String fishingOperationId) { Preconditions.checkNotNull(fishingOperationId); @@ -100,8 +103,11 @@ accidentalBatch.setSpecies(species); // Comment - accidentalBatch.setComment((String) source[colIndex]); + accidentalBatch.setComment((String) source[colIndex++]); + // synchronizationStatus + accidentalBatch.setSynchronizationStatus((String) source[colIndex]); + // Sample Measurements accidentalBatch.setCaracteristics(new CaracteristicMap()); Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceService.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceService.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceService.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -30,7 +30,6 @@ import fr.ifremer.tutti.persistence.entities.data.BatchContainer; import fr.ifremer.tutti.persistence.entities.data.BenthosBatch; import fr.ifremer.tutti.persistence.entities.data.BenthosBatchFrequency; -import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; import fr.ifremer.tutti.persistence.entities.referential.Species; import org.springframework.transaction.annotation.Transactional; @@ -46,7 +45,7 @@ public interface BenthosBatchPersistenceService extends TuttiPersistenceServiceImplementor { //------------------------------------------------------------------------// - //-- Benthos Batch methods --// + //-- BenthosBatch methods --// //------------------------------------------------------------------------// /** @@ -54,13 +53,13 @@ * * Note: All childs of the batch should be loaded here. * - * @param fishingOperationId if of the fishing operation to seek - * @param sampleCategoryModel [optional] sample category model to check + * @param fishingOperationId if of the fishing operation to seek + * @param validateTree flag to validate sample category model * @return the list of root {@link BenthosBatch} * @throws InvalidBatchModelException if batch does not respect the sample category model * @since 1.0 */ - BatchContainer<BenthosBatch> getRootBenthosBatch(String fishingOperationId, SampleCategoryModel sampleCategoryModel) throws InvalidBatchModelException; + BatchContainer<BenthosBatch> getRootBenthosBatch(String fishingOperationId, boolean validateTree) throws InvalidBatchModelException; @Transactional(readOnly = false) BenthosBatch createBenthosBatch(BenthosBatch bean, String parentBatchId); @@ -85,7 +84,7 @@ void changeBenthosBatchSpecies(String batchId, Species species); //------------------------------------------------------------------------// - //-- SpeciesBatchFrequency methods (for benthos) --// + //-- BenthosBatchFrequency methods --// //------------------------------------------------------------------------// /** Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceImpl.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -45,18 +45,15 @@ import fr.ifremer.tutti.persistence.entities.data.BenthosBatchFrequencys; import fr.ifremer.tutti.persistence.entities.data.BenthosBatchs; import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; -import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.persistence.entities.referential.Species; import fr.ifremer.tutti.persistence.service.batch.BatchPersistenceHelper; import fr.ifremer.tutti.persistence.service.batch.BatchTreeHelper; -import org.apache.commons.collections.CollectionUtils; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.springframework.dao.DataIntegrityViolationException; import org.springframework.stereotype.Service; import javax.annotation.Resource; -import java.io.Serializable; import java.util.Collection; import java.util.Collections; import java.util.List; @@ -90,37 +87,23 @@ @Resource(name = "measurementPersistenceHelper") protected MeasurementPersistenceHelper measurementPersistenceHelper; - protected SampleCategoryModel sampleCategoryModel; - //------------------------------------------------------------------------// //-- Benthos Batch methods --// //------------------------------------------------------------------------// @Override - public void init() { - super.init(); - - sampleCategoryModel = config.getSampleCategoryModel(); - } - - @Override public BatchContainer<BenthosBatch> getRootBenthosBatch(String fishingOperationId, - SampleCategoryModel sampleCategoryModel) { + boolean validateTree) { Preconditions.checkNotNull(fishingOperationId); CatchBatch catchBatch = batchHelper.getRootCatchBatchByFishingOperationId(fishingOperationId, false); - // Vrac / Benthos + // -- Vrac > Benthos > Alive Itemized SortingBatch vracBenthosBatch = batchTreeHelper.getBenthosVracAliveItemizedRootBatch(catchBatch); -// SortingBatch vracBenthosBatch = batchHelper.getSortingBatch( -// catchBatch, -// "Vrac > Benthos > Alive Itemized", -// enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_VRAC_ID, -// enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS, -// enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED -// ); - BatchContainer<BenthosBatch> result = new BatchContainer<BenthosBatch>(); + SampleCategoryModel sampleCategoryModel = getSampleCategoryModel(); + + BatchContainer<BenthosBatch> result = new BatchContainer<>(); if (vracBenthosBatch != null) { result.setId(vracBenthosBatch.getId()); @@ -134,7 +117,8 @@ } BenthosBatch target = BenthosBatchs.newBenthosBatch(); target.setSpecies(species); - entityToBenthosBatch(source, target); + + entityToBenthosBatch(sampleCategoryModel, source, target); result.addChildren(target); if (log.isDebugEnabled()) { log.debug("Loaded CatchBatch Vrac > Benthos > Alive Itemized > " + target.getSpecies().getReferenceTaxonId() + ": " + target.getId()); @@ -142,14 +126,9 @@ } } - // Hors-Vrac / Benthos + // -- Hors Vrac > Benthos SortingBatch horsVracBenthosBatch = batchTreeHelper.getBenthosHorsVracRootBatch(catchBatch); -// SortingBatch horsVracBenthosBatch = batchHelper.getSortingBatch( -// catchBatch, -// "Hors Vrac > Benthos", -// enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_HORS_VRAC_ID, -// enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS -// ); + if (horsVracBenthosBatch != null) { for (Batch batch : horsVracBenthosBatch.getChildBatchs()) { SortingBatch source = (SortingBatch) batch; @@ -163,7 +142,7 @@ BenthosBatch target = BenthosBatchs.newBenthosBatch(); target.setSpecies(species); - entityToBenthosBatch(source, target); + entityToBenthosBatch(sampleCategoryModel, source, target); result.addChildren(target); if (log.isDebugEnabled()) { log.debug("Loaded CatchBatch Hors Vrac > Benthos > " + target.getSpecies().getReferenceTaxonId() + ": " + target.getId()); @@ -171,7 +150,7 @@ } } - if (sampleCategoryModel != null) { + if (validateTree) { // validate with given sample category model batchHelper.validateBenthos(sampleCategoryModel, result); @@ -227,30 +206,31 @@ @Override public void deleteBenthosSubBatch(String id) { - Preconditions.checkNotNull(id); + batchHelper.deleteSpeciesSubBatch(id); - Integer benthosBatchId = Integer.valueOf(id); - - CatchBatch catchBatch = batchHelper.getRootCatchBatchByBatchId(benthosBatchId); - SortingBatch sortingBatch = batchHelper.getSortingBatchById( - catchBatch, benthosBatchId); - - // get his children - Collection<Batch> childBatchs = sortingBatch.getChildBatchs(); - - if (CollectionUtils.isNotEmpty(childBatchs)) { - - for (Batch childBatch : childBatchs) { - - // delete this child and all his children - Integer childBatchId = childBatch.getId(); - - if (log.isDebugEnabled()) { - log.debug("Delete child [" + childBatchId + "] of species batch: " + id); - } - batchHelper.removeWithChildren(childBatchId); - } - } +// Preconditions.checkNotNull(id); +// +// Integer benthosBatchId = Integer.valueOf(id); +// +// CatchBatch catchBatch = batchHelper.getRootCatchBatchByBatchId(benthosBatchId); +// SortingBatch sortingBatch = batchHelper.getSortingBatchById(catchBatch, benthosBatchId); +// +// // get his children +// Collection<Batch> childBatchs = sortingBatch.getChildBatchs(); +// +// if (CollectionUtils.isNotEmpty(childBatchs)) { +// +// for (Batch childBatch : childBatchs) { +// +// // delete this child and all his children +// Integer childBatchId = childBatch.getId(); +// +// if (log.isDebugEnabled()) { +// log.debug("Delete child [" + childBatchId + "] of species batch: " + id); +// } +// batchHelper.removeWithChildren(childBatchId); +// } +// } } @Override @@ -272,12 +252,12 @@ Preconditions.checkNotNull(benthosBatchId); List<SortingBatch> frequencyChilds = batchHelper.getFrequencies( - sampleCategoryModel, benthosBatchId); + benthosBatchId); List<BenthosBatchFrequency> results = Lists.newArrayList(); for (SortingBatch child : frequencyChilds) { BenthosBatchFrequency target = BenthosBatchFrequencys.newBenthosBatchFrequency(); - entityToBenthosBatchFrequency(child, target); + batchHelper.entityToBatchFrequency(child, target); results.add(target); } return Collections.unmodifiableList(results); @@ -335,7 +315,7 @@ // Remember child ids, to remove unchanged item (see at bottom in this method) List<Integer> notUpdatedChildIds = Lists.newArrayList(); List<SortingBatch> frequencyChilds = batchHelper.getFrequencyChilds( - sampleCategoryModel, parentBatch); + parentBatch); for (SortingBatch child : frequencyChilds) { notUpdatedChildIds.add(child.getId()); } @@ -389,7 +369,8 @@ //-- Internal methods --// //------------------------------------------------------------------------// - protected BenthosBatch entityToBenthosBatch(SortingBatch source, + protected BenthosBatch entityToBenthosBatch(SampleCategoryModel sampleCategoryModel, + SortingBatch source, BenthosBatch target) { Preconditions.checkNotNull(target.getSpecies()); @@ -428,7 +409,7 @@ if (sm.getQualitativeValue() != null) { qualitativeId = sm.getQualitativeValue().getId(); } - setSampleCategoryQualitative( + batchHelper.setSampleCategoryQualitative( target, sm.getPmfm().getId(), sm.getNumericalValue(), @@ -443,9 +424,9 @@ SortingBatch sourceChild = (SortingBatch) batch; BenthosBatch targetChild = BenthosBatchs.newBenthosBatch(); targetChild.setSpecies(target.getSpecies()); - entityToBenthosBatch(sourceChild, targetChild); + entityToBenthosBatch(sampleCategoryModel, sourceChild, targetChild); if (log.isDebugEnabled()) { - log.debug("Loaded CatchBatch Hors Vrac > (Species|Benthos) > " + targetChild.getSpecies().getReferenceTaxonId() + " : " + target.getId()); + log.debug("Loaded CatchBatch Hors Vrac > Benthos > " + targetChild.getSpecies().getReferenceTaxonId() + " : " + target.getId()); } if (targetChild.getSampleCategoryValue() != null) { targetChilds.add(targetChild); @@ -461,31 +442,6 @@ return target; } - protected void entityToBenthosBatchFrequency(SortingBatch source, - BenthosBatchFrequency target) { - - target.setId(source.getId()); - - // Rank order - target.setRankOrder(Integer.valueOf(source.getRankOrder())); - - target.setNumber(source.getIndividualCount()); - target.setWeight(source.getWeight()); - - Preconditions.checkState(source.getSortingMeasurements().size() == 1, "SortingBatch [" + source.getId() + "] need exactly one sortingMeasurement (to store the length step category), but had " + source.getSortingMeasurements().size()); - SortingMeasurement sm = source.getSortingMeasurements().iterator().next(); - Preconditions.checkNotNull(sm.getPmfm(), "SortingMeasurement [" + sm.getId() + "] can not have a null pmfm"); - Preconditions.checkNotNull(sm.getPmfm().getId(), "SortingMeasurement [" + sm.getId() + "] can not have a pmfm with null id"); - - // Length step category - Caracteristic lengthStepCaracteristic = - referentialService.getCaracteristic(sm.getPmfm().getId()); - target.setLengthStepCaracteristic(lengthStepCaracteristic); - - // Length - target.setLengthStep(sm.getNumericalValue()); - } - protected void benthosBatchToEntity(BenthosBatch source, SortingBatch target, String parentBatchId, @@ -672,7 +628,7 @@ if ((source.getLengthStepCaracteristic() != null && source.getLengthStep() != null)) { Integer pmfmId = source.getLengthStepCaracteristic().getIdAsInt(); SortingMeasurement sortingMeasurement = measurementPersistenceHelper.setSortingMeasurement(target, pmfmId, - source.getLengthStep()); + source.getLengthStep()); notChangedSortingMeasurements.remove(sortingMeasurement); } @@ -696,26 +652,4 @@ sortingMeasurements.removeAll(notChangedSortingMeasurements); } } - - public void setSampleCategoryQualitative(BenthosBatch target, - Integer pmfmId, - Float numericalvalue, - String alphanumericalValue, - Integer qualitativeValueId) { - // skip if null or corresponding to the SORTING_TYPE PMFM (Espèce, Benthos, Plancton, etc.) - if (pmfmId == null || pmfmId.equals(enumeration.PMFM_ID_SORTING_TYPE)) { - return; - } - - boolean isSamplingCategory = sampleCategoryModel.containsCategoryId(pmfmId); - Preconditions.checkNotNull(isSamplingCategory, "Unable to find corresponding SampleCategoryEnum for PMFM.ID : " + pmfmId); - - target.setSampleCategoryId(pmfmId); - Serializable categoryValue = batchHelper.getSampleCategoryQualitative( - pmfmId, - numericalvalue, - alphanumericalValue, - qualitativeValueId); - target.setSampleCategoryValue(categoryValue); - } } Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CatchBatchPersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -72,6 +72,9 @@ @Resource(name = "measurementPersistenceHelper") protected MeasurementPersistenceHelper measurementPersistenceHelper; + @Resource(name = "synchronizationStatusHelper") + protected SynchronizationStatusHelper synchronizationStatusHelper; + //------------------------------------------------------------------------// //-- CatchBatch methods --// //------------------------------------------------------------------------// @@ -92,94 +95,62 @@ fr.ifremer.adagio.core.dao.data.batch.CatchBatch source = batchHelper.getRootCatchBatchByFishingOperationId(fishingOperationId, true); + if (log.isDebugEnabled()) { + log.debug("Loaded CatchBatch: " + source.getId()); + } + + batchTreeHelper.displayCatchBatch(source); + CatchBatch result = new CatchBatchBean(); result.setId(source.getId()); result.setCatchTotalWeight(source.getWeight()); + result.setSynchronizationStatus(source.getSynchronizationStatus()); - if (log.isDebugEnabled()) { - log.debug("Loaded CatchBatch: " + result.getId()); - } - - // Vrac + // -- Vrac SortingBatch vracBatch = batchTreeHelper.getVracBatch(source); -// SortingBatch vracBatch = batchHelper.getSortingBatch( -// source, -// "Vrac", -// enumeration.PMFM_ID_SORTED_UNSORTED, -// enumeration.QUALITATIVE_VRAC_ID); if (vracBatch != null) { result.setCatchTotalSortedCarousselWeight(vracBatch.getWeight()); result.setCatchTotalSortedTremisWeight(vracBatch.getWeightBeforeSampling()); - // Vrac > Species + // -- Vrac > Species SortingBatch vracSpeciesBatch = batchTreeHelper.getSpeciesVracRootBatch(vracBatch); -// SortingBatch vracSpeciesBatch = batchHelper.getSortingBatch( -// vracBatch, -// "Vrac > Species", -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES); if (vracSpeciesBatch != null) { result.setSpeciesTotalSortedWeight(vracSpeciesBatch.getWeight()); - // Vrac > Species > Inert + // -- Vrac > Species > Inert SortingBatch inertBatch = batchTreeHelper.getSpeciesVracInertRootBatch(vracSpeciesBatch); -// SortingBatch inertBatch = batchHelper.getSortingBatch( -// vracSpeciesBatch, -// "Vrac > Species > Inert", -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT); if (inertBatch != null) { result.setSpeciesTotalInertWeight(inertBatch.getWeight()); } - // Vrac > Species > Alive not itemized + // -- Vrac > Species > Alive not itemized SortingBatch livingNotItemizedBatch = batchTreeHelper.getSpeciesVracAliveNotItemizedRootBatch(vracSpeciesBatch); -// SortingBatch livingNotItemizedBatch = batchHelper.getSortingBatch( -// vracSpeciesBatch, -// "Vrac > Species > Alive not itemized", -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED); if (livingNotItemizedBatch != null) { result.setSpeciesTotalLivingNotItemizedWeight(livingNotItemizedBatch.getWeight()); } } - // Vrac > Benthos + // -- Vrac > Benthos SortingBatch vracBenthosBatch = batchTreeHelper.getBenthosVracRootBatch(vracBatch); -// SortingBatch vracBenthosBatch = batchHelper.getSortingBatch( -// vracBatch, -// "Vrac > Benthos", -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS); if (vracBenthosBatch != null) { result.setBenthosTotalSortedWeight(vracBenthosBatch.getWeight()); - // Vrac > Benthos > Inert + // -- Vrac > Benthos > Inert SortingBatch inertBatch = batchTreeHelper.getBenthosVracInertRootBatch(vracBenthosBatch); -// SortingBatch inertBatch = batchHelper.getSortingBatch( -// vracBenthosBatch, -// "Vrac > Benthos > Inert", -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT); if (inertBatch != null) { result.setBenthosTotalInertWeight(inertBatch.getWeight()); } - // Vrac > Benthos > Alive no itemized + // -- Vrac > Benthos > Alive no itemized SortingBatch livingNotItemizedBatch = batchTreeHelper.getBenthosVracAliveNotItemizedRootBatch(vracBenthosBatch); -// SortingBatch livingNotItemizedBatch = batchHelper.getSortingBatch( -// vracBenthosBatch, -// "Vrac > Benthos > Alive not itemized", -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED); if (livingNotItemizedBatch != null) { result.setBenthosTotalLivingNotItemizedWeight(livingNotItemizedBatch.getWeight()); @@ -187,52 +158,27 @@ } } - // Hors Vrac + // -- Hors Vrac SortingBatch horsVracBatch = batchTreeHelper.getHorsVracBatch(source); -// SortingBatch horsVracBatch = batchHelper.getSortingBatch( -// source, -// "Hors Vrac", -// enumeration.PMFM_ID_SORTED_UNSORTED, -// enumeration.QUALITATIVE_HORS_VRAC_ID); if (horsVracBatch != null) { - // Hors Vrac > Species + // -- Hors Vrac > Species batchTreeHelper.getSpeciesHorsVracRootBatch(horsVracBatch); -// batchHelper.getSortingBatch( -// horsVracBatch, -// "Hors Vrac > Species", -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES); - // Hors Vrac > Benthos + // -- Hors Vrac > Benthos batchTreeHelper.getBenthosHorsVracRootBatch(horsVracBatch); -// batchHelper.getSortingBatch( -// horsVracBatch, -// "Hors Vrac > Benthos", -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS); - // Hors Vrac > MarineLitter + // -- Hors Vrac > MarineLitter SortingBatch marineLitterBatch = batchTreeHelper.getMarineLitterRootBatch(horsVracBatch); -// SortingBatch marineLitterBatch = batchHelper.getSortingBatch( -// horsVracBatch, -// "Hors Vrac > MarineLitter", -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_MARINE_LITTER); if (marineLitterBatch != null) { result.setMarineLitterTotalWeight(marineLitterBatch.getWeight()); } } - // Non trié + // -- Unsorted SortingBatch unsortedBatch = batchTreeHelper.getRejectedBatch(source); -// SortingBatch unsortedBatch = batchHelper.getSortingBatch( -// source, -// "Unsorted", -// enumeration.PMFM_ID_SORTED_UNSORTED, -// enumeration.QUALITATIVE_UNSORTED_ID); if (unsortedBatch != null) { result.setCatchTotalRejectedWeight(unsortedBatch.getWeight()); @@ -248,6 +194,8 @@ Preconditions.checkNotNull(bean.getFishingOperation()); Preconditions.checkNotNull(bean.getFishingOperation().getId()); + bean.setSynchronizationStatus(SynchronizationStatus.DIRTY.getValue()); + fr.ifremer.adagio.core.dao.data.batch.CatchBatch catchBatch = fr.ifremer.adagio.core.dao.data.batch.CatchBatch.Factory.newInstance(); catchBatchToEntity(bean, catchBatch); bean = batchHelper.createCatchBatch(bean, catchBatch); @@ -273,6 +221,8 @@ Preconditions.checkNotNull(bean.getFishingOperation()); Preconditions.checkNotNull(bean.getFishingOperation().getId()); + bean.setSynchronizationStatus(SynchronizationStatus.DIRTY.getValue()); + getCurrentSession().enableFetchProfile("batch-with-childs"); getCurrentSession().setFlushMode(FlushMode.COMMIT); fr.ifremer.adagio.core.dao.data.batch.CatchBatch catchBatch = load(CatchBatchImpl.class, bean.getIdAsInt()); @@ -316,8 +266,13 @@ target.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); target.setRankOrder((short) 1); - target.setSynchronizationStatus(SynchronizationStatus.DIRTY.getValue()); + // SynchronizationStatus + String synchronizationStatus = SynchronizationStatus.DIRTY.getValue(); + target.setSynchronizationStatus(synchronizationStatus); + target.getFishingOperation().getFishingTrip().setSynchronizationStatus(synchronizationStatus); + target.getFishingOperation().getFishingTrip().getScientificCruise().setSynchronizationStatus(synchronizationStatus); + // Create lists to store all updates, then remove not updated items Collection<QuantificationMeasurement> quantificationMeasurements = target.getQuantificationMeasurements(); Set<QuantificationMeasurement> notChangedQuantificationMeasurements = Sets.newHashSet(); @@ -340,10 +295,8 @@ } SortingBatch vracBatch = batchTreeHelper.getVracBatch(target); -// SortingBatch vracBatch = batchHelper.getVracBatch(target); SortingBatch horsVracBatch = batchTreeHelper.getHorsVracBatch(target); -// SortingBatch horsVracBatch = batchHelper.getHorsVracBatch(target); SortingBatch horsVracSpeciesRootBatch = null; SortingBatch horsVracBenthosRootBatch = null; @@ -352,11 +305,8 @@ if (horsVracBatch != null) { horsVracSpeciesRootBatch = batchTreeHelper.getSpeciesHorsVracRootBatch(horsVracBatch); -// horsVracSpeciesRootBatch = batchHelper.getSpeciesHorsVracRootBatch(horsVracBatch); horsVracBenthosRootBatch = batchTreeHelper.getBenthosHorsVracRootBatch(horsVracBatch); -// horsVracBenthosRootBatch = batchHelper.getBenthosHorsVracRootBatch(horsVracBatch); horsVracMarineLitterRootBatch = batchTreeHelper.getMarineLitterRootBatch(horsVracBatch); -// horsVracMarineLitterRootBatch = batchHelper.getMarineLitterRootBatch(horsVracBatch); } SortingBatch speciesVracBatch = null; @@ -371,26 +321,18 @@ if (vracBatch != null) { speciesVracBatch = batchTreeHelper.getSpeciesVracRootBatch(vracBatch); -// speciesVracBatch = batchHelper.getSpeciesVracRootBatch(vracBatch); if (speciesVracBatch != null) { speciesVracAliveNotItemizeRootBatch = batchTreeHelper.getSpeciesVracAliveNotItemizedRootBatch(speciesVracBatch); -// speciesVracAliveNotItemizeRootBatch = batchHelper.getSpeciesVracAliveNotItemizedRootBatch(speciesVracBatch); speciesVracInertRootBatch = batchTreeHelper.getSpeciesVracInertRootBatch(speciesVracBatch); -// speciesVracInertRootBatch = batchHelper.getSpeciesVracInertRootBatch(speciesVracBatch); speciesVracAliveItemizeRootBatch = batchTreeHelper.getSpeciesVracAliveItemizedRootBatch(speciesVracBatch); -// speciesVracAliveItemizeRootBatch = batchHelper.getSpeciesVracAliveItemizeRootBatch(speciesVracBatch); } benthosVracBatch = batchTreeHelper.getBenthosVracRootBatch(vracBatch); -// benthosVracBatch = batchHelper.getBenthosVracRootBatch(vracBatch); if (benthosVracBatch != null) { benthosVracAliveNotItemizeRootBatch = batchTreeHelper.getBenthosVracAliveNotItemizedRootBatch(benthosVracBatch); -// benthosVracAliveNotItemizeRootBatch = batchHelper.getBenthosVracAliveNotItemizedRootBatch(benthosVracBatch); benthosVracInertRootBatch = batchTreeHelper.getBenthosVracInertRootBatch(benthosVracBatch); -// benthosVracInertRootBatch = batchHelper.getBenthosVracInertRootBatch(benthosVracBatch); benthosVracAliveItemizeRootBatch = batchTreeHelper.getBenthosVracAliveItemizedRootBatch(benthosVracBatch); -// benthosVracAliveItemizeRootBatch = batchHelper.getBenthosVracAliveItemizeRootBatch(benthosVracBatch); } } @@ -435,33 +377,23 @@ boolean needUnsorted = batchTreeHelper.getRejectedBatch(target) != null || source.getCatchTotalRejectedWeight() != null; -// boolean needUnsorted = batchHelper.getRejectedBatch(target) != null || - // --------------------------------------------------------------------- - // Vrac - // --------------------------------------------------------------------- - if (needVrac) { - + // -- Vrac vracBatch = batchTreeHelper.getOrCreateVracBatch( target, source.getCatchTotalSortedCarousselWeight(), source.getCatchTotalSortedTremisWeight()); if (needVracSpecies) { - - // --------------------------------------------------------------------- - // Vrac / Species - // --------------------------------------------------------------------- + // -- Vrac > Species speciesVracBatch = batchTreeHelper.getOrCreateSpeciesVracRootBatch( target, vracBatch, source.getSpeciesTotalSortedWeight()); if (needVracSpeciesAliveNotItemized) { - // --------------------------------------------------------------------- - // Vrac / Species / Alive not itemized - // --------------------------------------------------------------------- + // -- Vrac > Species > Alive not itemized batchTreeHelper.getOrCreateSpeciesVracAliveNotItemizedRootBatch( target, speciesVracBatch, @@ -469,9 +401,7 @@ } if (needVracSpeciesInert) { - // --------------------------------------------------------------------- - // Vrac / Species / Inert (not alive) - // --------------------------------------------------------------------- + // -- Vrac > Species > Inert (not alive) batchTreeHelper.getOrCreateSpeciesVracInertRootBatch( target, speciesVracBatch, @@ -479,9 +409,7 @@ } if (needVracSpeciesAliveItemized) { - // --------------------------------------------------------------------- - // Vrac / Species / Alive itemized - // --------------------------------------------------------------------- + // -- Vrac > Species > Alive itemized batchTreeHelper.getOrCreateSpeciesVracAliveItemizedRootBatch( target, speciesVracBatch); @@ -489,19 +417,14 @@ } if (needVracBenthos) { - - // --------------------------------------------------------------------- - // Vrac > Benthos - // --------------------------------------------------------------------- + // -- Vrac > Benthos benthosVracBatch = batchTreeHelper.getOrCreateBenthosVracRootBatch( target, vracBatch, source.getBenthosTotalSortedWeight()); if (needVracBenthosAliveNotItemized) { - // --------------------------------------------------------------------- - // Vrac / Benthos / Alive not itemized - // --------------------------------------------------------------------- + // -- Vrac > Benthos > Alive not itemized batchTreeHelper.getOrCreateBenthosVracAliveNotItemizedRootBatch( target, benthosVracBatch, @@ -509,9 +432,7 @@ } if (needVracBenthosInert) { - // --------------------------------------------------------------------- - // Vrac / Benthos / Inert (not alive) - // --------------------------------------------------------------------- + // -- Vrac > Benthos > Inert (not alive) batchTreeHelper.getOrCreateBenthosVracInertRootBatch( target, benthosVracBatch, @@ -519,9 +440,7 @@ } if (needVracBenthosAliveItemized) { - // --------------------------------------------------------------------- - // Vrac / Benthos / Alive itemized - // --------------------------------------------------------------------- + // -- Vrac > Benthos > Alive itemized batchTreeHelper.getOrCreateBenthosVracAliveItemizedRootBatch( target, benthosVracBatch); @@ -531,34 +450,25 @@ } if (needHorsVrac) { - - // --------------------------------------------------------------------- - // Hors Vrac - // --------------------------------------------------------------------- + // -- Hors Vrac horsVracBatch = batchTreeHelper.getOrCreateHorsVracBatch(target); if (needHorsVracSpecies) { - // --------------------------------------------------------------------- - // Hors Vrac > Species - // --------------------------------------------------------------------- + // -- Hors Vrac > Species batchTreeHelper.getOrCreateSpeciesHorsVracRootBatch( target, horsVracBatch); } if (needHorsVracBenthos) { - // --------------------------------------------------------------------- - // Hors Vrac > Benthos - // --------------------------------------------------------------------- + // -- Hors Vrac > Benthos batchTreeHelper.getOrCreateBenthosHorsVracRootBatch( target, horsVracBatch); } if (needHorsVracMarineLitter) { - // --------------------------------------------------------------------- - // Hors Vrac > MarineLitter - // --------------------------------------------------------------------- + // -- Hors Vrac > MarineLitter batchTreeHelper.getOrCreateMarineLitterRootBatch( target, horsVracBatch, @@ -567,9 +477,7 @@ } if (needUnsorted) { - // --------------------------------------------------------------------- - // Unsorted (=rejected) - // --------------------------------------------------------------------- + // -- Unsorted (=rejected) batchTreeHelper.getOrCreateRejectedBatch( target, source.getCatchTotalRejectedWeight()); } Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/CruisePersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -34,7 +34,6 @@ import fr.ifremer.adagio.core.dao.administration.user.PersonDao; import fr.ifremer.adagio.core.dao.administration.user.PersonImpl; import fr.ifremer.adagio.core.dao.data.measure.GearPhysicalMeasurement; -import fr.ifremer.adagio.core.dao.data.measure.SurveyMeasurement; import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.ObservedFishingTrip; import fr.ifremer.adagio.core.dao.data.survey.scientificCruise.ScientificCruise; @@ -51,12 +50,9 @@ import fr.ifremer.adagio.core.dao.referential.location.Location; import fr.ifremer.adagio.core.dao.referential.location.LocationDao; import fr.ifremer.adagio.core.dao.referential.location.LocationImpl; -import fr.ifremer.adagio.core.dao.referential.pmfm.Pmfm; import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmDao; -import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmImpl; import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValue; import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueDao; -import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueImpl; import fr.ifremer.adagio.core.dao.technical.synchronization.SynchronizationStatus; import fr.ifremer.tutti.persistence.dao.GearPhysicalFeaturesDaoTutti; import fr.ifremer.tutti.persistence.entities.CaracteristicMap; @@ -151,6 +147,12 @@ @Resource(name = "gearPhysicalFeaturesDaoTutti") protected GearPhysicalFeaturesDaoTutti gearPhysicalFeaturesDao; + @Resource(name = "measurementPersistenceHelper") + protected MeasurementPersistenceHelper measurementPersistenceHelper; + + @Resource(name = "synchronizationStatusHelper") + protected SynchronizationStatusHelper synchronizationStatusHelper; + @Override public List<Cruise> getAllCruise(String programId) { Iterator<Object[]> list = queryList( @@ -164,6 +166,7 @@ target.setId(String.valueOf(source[0])); target.setName((String) source[1]); target.setBeginDate((Date) source[2]); + target.setSynchronizationStatus((String) source[3]); result.add(target); } return Collections.unmodifiableList(result); @@ -202,13 +205,18 @@ // name result.setName((String) source[index++]); + // begin Date result.setBeginDate((Date) source[index++]); + + // end Date result.setEndDate((Date) source[index++]); + // vessel String vesselCode = (String) source[index++]; Vessel vessel = referentialService.getVessel(vesselCode); result.setVessel(vessel); + // head of sort room List<Person> headOfMissions = Lists.newArrayList(); result.setHeadOfMission(headOfMissions); List<Person> headOfSortRoom = Lists.newArrayList(); @@ -218,9 +226,13 @@ Person manager = referentialService.getPerson(managerId); headOfMissions.add(manager); + // comment result.setComment((String) source[index++]); - // load surverPart + // synchronizationStatus + result.setSynchronizationStatus((String) source[index++]); + + // surverPart result.setSurveyPart((String) source[index]); // get secondary gears from fishingOperation (first load from Allegro DB only) @@ -291,6 +303,7 @@ scientificCruiseDao.create(scientificCruise); bean.setId(String.valueOf(scientificCruise.getId())); + bean.setSynchronizationStatus(scientificCruise.getSynchronizationStatus()); return bean; } @@ -314,10 +327,6 @@ "Could not retrieve cruise with id=" + bean.getId()); } -// boolean vesselChanged = ObjectUtils.notEqual( -// bean.getVessel().getId(), -// scientificCruise.getVessel().getCode()); - cruiseToEntity(bean, scientificCruise); scientificCruiseDao.update(scientificCruise); @@ -361,6 +370,7 @@ } } + bean.setSynchronizationStatus(scientificCruise.getSynchronizationStatus()); return bean; } @@ -546,7 +556,7 @@ // Retrieve entities : FishingTrip ObservedFishingTrip fishingTrip; - if (target.getFishingTrips() == null || target.getFishingTrips().size() == 0) { + if (CollectionUtils.isEmpty(target.getFishingTrips())) { fishingTrip = ObservedFishingTrip.Factory.newInstance(); if (target.getFishingTrips() == null) { target.setFishingTrips(Lists.newArrayList((FishingTrip) fishingTrip)); @@ -585,7 +595,6 @@ } // Default values : - target.setSynchronizationStatus(SynchronizationStatus.DIRTY.getValue()); if (target.getCreationDate() == null) { target.setCreationDate(newCreateDate()); } @@ -602,9 +611,11 @@ fishingTrip.setRecorderPerson(target.getRecorderPerson()); fishingTrip.setRecorderDepartment(target.getRecorderDepartment()); fishingTrip.setCreationDate(target.getCreationDate()); - fishingTrip.setSynchronizationStatus(target.getSynchronizationStatus()); fishingTrip.setQualityFlag(qualityFlagNotQualified); + // SynchronizationStatus + synchronizationStatusHelper.setDirty(fishingTrip); + // DepartureLocation Location departureLocation = load(LocationImpl.class, Integer.valueOf(source.getDepartureLocation().getId())); fishingTrip.setDepartureLocation(departureLocation); @@ -616,11 +627,11 @@ if (StringUtils.isEmpty(source.getSurveyPart())) { // remove surveyMeasurement if exists - removeSurveyMeasurement(fishingTrip, enumeration.PMFM_ID_SURVEY_PART); + measurementPersistenceHelper.removeSurveyMeasurement(fishingTrip, enumeration.PMFM_ID_SURVEY_PART); } else { // update it or create it - setSurveyMeasurement(fishingTrip, enumeration.PMFM_ID_SURVEY_PART, null, source.getSurveyPart(), null); + measurementPersistenceHelper.setSurveyMeasurement(fishingTrip, enumeration.PMFM_ID_SURVEY_PART, null, source.getSurveyPart(), null); } // Gear @@ -755,82 +766,82 @@ fishingTrip.getVesselPersonFeatures().addAll(vesselPersonFeaturesMap.values()); } - protected SurveyMeasurement getSurveyMeasurement(FishingTrip fishingTrip, - Integer pmfmId) { - SurveyMeasurement result = null; - - for (SurveyMeasurement vum : fishingTrip.getSurveyMeasurements()) { - if (pmfmId.equals(vum.getPmfm().getId())) { - result = vum; - break; - } - } - - return result; - } - - protected SurveyMeasurement createSurveyMeasurement(FishingTrip fishingTrip, - Integer pmfmId, - Float numericalValue, - String alphanumericalValue, - Integer qualitativevalueId) { - - SurveyMeasurement result = SurveyMeasurement.Factory.newInstance(); - result.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); - result.setDepartment(fishingTrip.getRecorderDepartment()); - Pmfm pmfm = load(PmfmImpl.class, pmfmId); - result.setPmfm(pmfm); - result.setFishingTrip(fishingTrip); - - if (alphanumericalValue != null) { - result.setAlphanumericalValue(alphanumericalValue); - } else if (numericalValue != null) { - result.setNumericalValue(numericalValue); - } else if (qualitativevalueId != null) { - result.setQualitativeValue(load(QualitativeValueImpl.class, qualitativevalueId)); - } - - // add it to fishingTrip - if (fishingTrip.getSurveyMeasurements() == null) { - - //create new set of measurements - fishingTrip.setSurveyMeasurements(Sets.<SurveyMeasurement>newHashSet()); - } - - fishingTrip.getSurveyMeasurements().add(result); - - return result; - } - - protected SurveyMeasurement setSurveyMeasurement(FishingTrip fishingTrip, - Integer pmfmId, - Float numericalValue, - String alphanumericalValue, - Integer qualitativevalueId) { - SurveyMeasurement result = getSurveyMeasurement(fishingTrip, pmfmId); - - if (result == null) { - result = createSurveyMeasurement(fishingTrip, - pmfmId, - numericalValue, - alphanumericalValue, - qualitativevalueId); - } - - return result; - } - - protected SurveyMeasurement removeSurveyMeasurement(FishingTrip fishingTrip, - Integer pmfmId) { - SurveyMeasurement result = getSurveyMeasurement(fishingTrip, pmfmId); - - if (result != null) { - - // measurement found, remove it - result.setFishingTrip(null); - fishingTrip.getSurveyMeasurements().remove(result); - } - - return result; - } +// public SurveyMeasurement getSurveyMeasurement(FishingTrip fishingTrip, +// Integer pmfmId) { +// SurveyMeasurement result = null; +// +// for (SurveyMeasurement vum : fishingTrip.getSurveyMeasurements()) { +// if (pmfmId.equals(vum.getPmfm().getId())) { +// result = vum; +// break; +// } +// } +// +// return result; +// } +// +// protected SurveyMeasurement createSurveyMeasurement(FishingTrip fishingTrip, +// Integer pmfmId, +// Float numericalValue, +// String alphanumericalValue, +// Integer qualitativevalueId) { +// +// SurveyMeasurement result = SurveyMeasurement.Factory.newInstance(); +// result.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); +// result.setDepartment(fishingTrip.getRecorderDepartment()); +// Pmfm pmfm = load(PmfmImpl.class, pmfmId); +// result.setPmfm(pmfm); +// result.setFishingTrip(fishingTrip); +// +// if (alphanumericalValue != null) { +// result.setAlphanumericalValue(alphanumericalValue); +// } else if (numericalValue != null) { +// result.setNumericalValue(numericalValue); +// } else if (qualitativevalueId != null) { +// result.setQualitativeValue(load(QualitativeValueImpl.class, qualitativevalueId)); +// } +// +// // add it to fishingTrip +// if (fishingTrip.getSurveyMeasurements() == null) { +// +// //create new set of measurements +// fishingTrip.setSurveyMeasurements(Sets.<SurveyMeasurement>newHashSet()); +// } +// +// fishingTrip.getSurveyMeasurements().add(result); +// +// return result; +// } +// +// protected SurveyMeasurement setSurveyMeasurement(FishingTrip fishingTrip, +// Integer pmfmId, +// Float numericalValue, +// String alphanumericalValue, +// Integer qualitativevalueId) { +// SurveyMeasurement result = getSurveyMeasurement(fishingTrip, pmfmId); +// +// if (result == null) { +// result = createSurveyMeasurement(fishingTrip, +// pmfmId, +// numericalValue, +// alphanumericalValue, +// qualitativevalueId); +// } +// +// return result; +// } +// +// protected SurveyMeasurement removeSurveyMeasurement(FishingTrip fishingTrip, +// Integer pmfmId) { +// SurveyMeasurement result = getSurveyMeasurement(fishingTrip, pmfmId); +// +// if (result != null) { +// +// // measurement found, remove it +// result.setFishingTrip(null); +// fishingTrip.getSurveyMeasurements().remove(result); +// } +// +// return result; +// } } Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -62,6 +62,7 @@ import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmImpl; import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValue; import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueImpl; +import fr.ifremer.adagio.core.dao.technical.synchronization.SynchronizationStatus; import fr.ifremer.adagio.core.service.referential.location.LocationService; import fr.ifremer.tutti.persistence.dao.GearPhysicalFeaturesDaoTutti; import fr.ifremer.tutti.persistence.entities.CaracteristicMap; @@ -153,6 +154,9 @@ @Resource(name = "locationDao") protected LocationExtendDao locationDao; + @Resource(name = "synchronizationStatusHelper") + protected SynchronizationStatusHelper synchronizationStatusHelper; + protected static Float DEFAULT_EMPTY_LATITUDE = 0.0001f; protected static Float DEFAULT_EMPTY_LONGITUDE = 0.0001f; @@ -218,6 +222,9 @@ fishingOperation.setFishingOperationNumber(Integer.valueOf(name)); } + // SynchronizationStatus + fishingOperation.setSynchronizationStatus((String)source[colIndex++]); + // If not found, compute it using a counter (see "order by startDateTime" in HQL query) if (fishingOperation.getFishingOperationNumber() == null) { fishingOperation.setFishingOperationNumber(fishingOperationRankOrder); @@ -276,6 +283,10 @@ if (StringUtils.isNotBlank(name)) { result.setFishingOperationNumber(Integer.valueOf(name)); } + + // SynchronizationStatus + result.setSynchronizationStatus((String)source[colIndex++]); + Short rankOrder = (Short) source[colIndex++]; // If not found, compute it using a counter (see "order by startDateTime" in HQL query) @@ -736,6 +747,12 @@ // Link to parent fishing trip target.setFishingTrip(fishingTrip); + // SynchronizationStatus + String synchronizationStatus = SynchronizationStatus.DIRTY.getValue(); + fishingTrip.setSynchronizationStatus(synchronizationStatus); + scientificCruise.setSynchronizationStatus(synchronizationStatus); + + // Retrieve entities : VesselPosition (start and end) VesselPosition startPosition = null; VesselPosition endPosition = null; @@ -881,7 +898,7 @@ } // Store into Gear Use Features - GearUseMeasurement gum = setGearUseMeasurement(scientificCruise, gearUseFeatures, enumeration.PMFM_ID_MULTIRIG_AGGREGATION, null, source.getMultirigAggregation(), null); + GearUseMeasurement gum = measurementPersistenceHelper.setGearUseMeasurement(scientificCruise, gearUseFeatures, enumeration.PMFM_ID_MULTIRIG_AGGREGATION, null, source.getMultirigAggregation(), null); notChangedGearUseMeasurements.remove(gum); } @@ -1100,7 +1117,7 @@ CaracteristicMap gearUseCaracteristics = source.getGearUseFeatures(); if (MapUtils.isNotEmpty(gearUseCaracteristics)) { for (Caracteristic caracteristic : gearUseCaracteristics.keySet()) { - GearUseMeasurement gum = setGearUseMeasurement( + GearUseMeasurement gum = measurementPersistenceHelper.setGearUseMeasurement( scientificCruise, gearUseFeatures, caracteristic, @@ -1318,63 +1335,63 @@ return vesselUseMeasurement; } - protected GearUseMeasurement setGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, - Integer pmfmId, - Float numericalValue, - String alphanumericalValue, - Integer qualitativevalueId) { - GearUseMeasurement gearUseMeasurement = getGearUseMeasurement(scientificCruise, gearUseFeatures, pmfmId, true); +// protected GearUseMeasurement setGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, +// Integer pmfmId, +// Float numericalValue, +// String alphanumericalValue, +// Integer qualitativevalueId) { +// GearUseMeasurement gearUseMeasurement = getGearUseMeasurement(scientificCruise, gearUseFeatures, pmfmId, true); +// +// if (alphanumericalValue != null) { +// gearUseMeasurement.setAlphanumericalValue(alphanumericalValue); +// } else if (numericalValue != null) { +// gearUseMeasurement.setNumericalValue(numericalValue); +// } else if (qualitativevalueId != null) { +// QualitativeValue qv = load(QualitativeValueImpl.class, qualitativevalueId); +// gearUseMeasurement.setQualitativeValue(qv); +// } +// +// return gearUseMeasurement; +// } - if (alphanumericalValue != null) { - gearUseMeasurement.setAlphanumericalValue(alphanumericalValue); - } else if (numericalValue != null) { - gearUseMeasurement.setNumericalValue(numericalValue); - } else if (qualitativevalueId != null) { - QualitativeValue qv = load(QualitativeValueImpl.class, qualitativevalueId); - gearUseMeasurement.setQualitativeValue(qv); - } +// protected GearUseMeasurement setGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, +// Caracteristic caracteristic, Serializable value) { +// GearUseMeasurement gearUseMeasurement = getGearUseMeasurement(scientificCruise, gearUseFeatures, Integer.valueOf(caracteristic.getId()), true); +// measurementPersistenceHelper.setMeasurement(gearUseMeasurement, caracteristic, value); +// return gearUseMeasurement; +// } +// +// protected GearUseMeasurement getGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, +// Integer pmfmId, boolean createIfNotExists) { +// GearUseMeasurement gearUseMeasurement = null; +// if (gearUseFeatures.getGearUseMeasurements() != null) { +// for (GearUseMeasurement vum : gearUseFeatures.getGearUseMeasurements()) { +// if (pmfmId.equals(vum.getPmfm().getId())) { +// gearUseMeasurement = vum; +// break; +// } +// } +// } +// if (gearUseMeasurement == null) { +// if (!createIfNotExists) { +// return null; +// } +// gearUseMeasurement = GearUseMeasurement.Factory.newInstance(); +// gearUseMeasurement.setGearUseFeatures(gearUseFeatures); +// if (gearUseFeatures.getGearUseMeasurements() == null) { +// gearUseFeatures.setGearUseMeasurements(Sets.newHashSet(gearUseMeasurement)); +// } else { +// gearUseFeatures.getGearUseMeasurements().add(gearUseMeasurement); +// } +// gearUseMeasurement.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); +// gearUseMeasurement.setDepartment(scientificCruise.getRecorderDepartment()); +// Pmfm pmfm = (Pmfm) getCurrentSession().load(PmfmImpl.class, pmfmId); +// gearUseMeasurement.setPmfm(pmfm); +// } +// +// return gearUseMeasurement; +// } - return gearUseMeasurement; - } - - protected GearUseMeasurement setGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, - Caracteristic caracteristic, Serializable value) { - GearUseMeasurement gearUseMeasurement = getGearUseMeasurement(scientificCruise, gearUseFeatures, Integer.valueOf(caracteristic.getId()), true); - measurementPersistenceHelper.setMeasurement(gearUseMeasurement, caracteristic, value); - return gearUseMeasurement; - } - - protected GearUseMeasurement getGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, - Integer pmfmId, boolean createIfNotExists) { - GearUseMeasurement gearUseMeasurement = null; - if (gearUseFeatures.getGearUseMeasurements() != null) { - for (GearUseMeasurement vum : gearUseFeatures.getGearUseMeasurements()) { - if (pmfmId.equals(vum.getPmfm().getId())) { - gearUseMeasurement = vum; - break; - } - } - } - if (gearUseMeasurement == null) { - if (!createIfNotExists) { - return null; - } - gearUseMeasurement = GearUseMeasurement.Factory.newInstance(); - gearUseMeasurement.setGearUseFeatures(gearUseFeatures); - if (gearUseFeatures.getGearUseMeasurements() == null) { - gearUseFeatures.setGearUseMeasurements(Sets.newHashSet(gearUseMeasurement)); - } else { - gearUseFeatures.getGearUseMeasurements().add(gearUseMeasurement); - } - gearUseMeasurement.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); - gearUseMeasurement.setDepartment(scientificCruise.getRecorderDepartment()); - Pmfm pmfm = (Pmfm) getCurrentSession().load(PmfmImpl.class, pmfmId); - gearUseMeasurement.setPmfm(pmfm); - } - - return gearUseMeasurement; - } - protected void setOperationVesselAssociation(Operation target, List<String> vesselCodes) { boolean noOperationVesselAssociations = Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/IndividualObservationBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/IndividualObservationBatchPersistenceServiceImpl.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/IndividualObservationBatchPersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -82,6 +82,9 @@ @Resource(name = "batchPersistenceHelper") protected BatchPersistenceHelper batchHelper; + @Resource(name = "synchronizationStatusHelper") + protected SynchronizationStatusHelper synchronizationStatusHelper; + @Override public List<IndividualObservationBatch> getAllIndividualObservationBatch(String fishingOperationId) { Preconditions.checkNotNull(fishingOperationId); @@ -118,6 +121,9 @@ // Comment batch.setComment((String) source[colIndex]); + // synchronizationStatus + batch.setSynchronizationStatus((String) source[colIndex]); + // Sample Measurements batch.setCaracteristics(new CaracteristicMap()); Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MeasurementPersistenceHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MeasurementPersistenceHelper.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/MeasurementPersistenceHelper.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -25,12 +25,21 @@ */ import com.google.common.base.Preconditions; +import com.google.common.collect.Sets; import fr.ifremer.adagio.core.dao.data.batch.Batch; import fr.ifremer.adagio.core.dao.data.batch.CatchBatchExtendDao; import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; +import fr.ifremer.adagio.core.dao.data.measure.GearUseMeasurement; import fr.ifremer.adagio.core.dao.data.measure.Measurement; import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; +import fr.ifremer.adagio.core.dao.data.measure.SurveyMeasurement; +import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; +import fr.ifremer.adagio.core.dao.data.survey.scientificCruise.ScientificCruise; +import fr.ifremer.adagio.core.dao.data.vessel.feature.use.GearUseFeatures; +import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; +import fr.ifremer.adagio.core.dao.referential.pmfm.Pmfm; +import fr.ifremer.adagio.core.dao.referential.pmfm.PmfmImpl; import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValue; import fr.ifremer.adagio.core.dao.referential.pmfm.QualitativeValueImpl; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; @@ -82,6 +91,10 @@ } } + //------------------------------------------------------------------------// + //-- SortingMeasurement --// + //------------------------------------------------------------------------// + public SortingMeasurement setSortingMeasurement( SortingBatch sortingBatch, Integer pmfmId, @@ -111,6 +124,170 @@ return catchBatchDao.getInheritedSortingMeasurement(sortingBatch, enumeration.PMFM_ID_SORTED_UNSORTED); } + //------------------------------------------------------------------------// + //-- GearUseMeasurement --// + //------------------------------------------------------------------------// + + public GearUseMeasurement setGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, + Integer pmfmId, + Float numericalValue, + String alphanumericalValue, + Integer qualitativevalueId) { + GearUseMeasurement gearUseMeasurement = getGearUseMeasurement(scientificCruise, gearUseFeatures, pmfmId, true); + + if (alphanumericalValue != null) { + gearUseMeasurement.setAlphanumericalValue(alphanumericalValue); + } else if (numericalValue != null) { + gearUseMeasurement.setNumericalValue(numericalValue); + } else if (qualitativevalueId != null) { + QualitativeValue qv = load(QualitativeValueImpl.class, qualitativevalueId); + gearUseMeasurement.setQualitativeValue(qv); + } + + return gearUseMeasurement; + } + + protected GearUseMeasurement setGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, + Caracteristic caracteristic, Serializable value) { + GearUseMeasurement gearUseMeasurement = getGearUseMeasurement(scientificCruise, gearUseFeatures, Integer.valueOf(caracteristic.getId()), true); + setMeasurement(gearUseMeasurement, caracteristic, value); + return gearUseMeasurement; + } + + protected GearUseMeasurement getGearUseMeasurement(ScientificCruise scientificCruise, GearUseFeatures gearUseFeatures, + Integer pmfmId, boolean createIfNotExists) { + GearUseMeasurement gearUseMeasurement = null; + if (gearUseFeatures.getGearUseMeasurements() != null) { + for (GearUseMeasurement vum : gearUseFeatures.getGearUseMeasurements()) { + if (pmfmId.equals(vum.getPmfm().getId())) { + gearUseMeasurement = vum; + break; + } + } + } + if (gearUseMeasurement == null) { + if (!createIfNotExists) { + return null; + } + gearUseMeasurement = GearUseMeasurement.Factory.newInstance(); + gearUseMeasurement.setGearUseFeatures(gearUseFeatures); + if (gearUseFeatures.getGearUseMeasurements() == null) { + gearUseFeatures.setGearUseMeasurements(Sets.newHashSet(gearUseMeasurement)); + } else { + gearUseFeatures.getGearUseMeasurements().add(gearUseMeasurement); + } + gearUseMeasurement.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + gearUseMeasurement.setDepartment(scientificCruise.getRecorderDepartment()); + Pmfm pmfm = (Pmfm) getCurrentSession().load(PmfmImpl.class, pmfmId); + gearUseMeasurement.setPmfm(pmfm); + } + + return gearUseMeasurement; + } + + + //------------------------------------------------------------------------// + //-- Misc --// + //------------------------------------------------------------------------// + + public String toString(Measurement measurement) { + Pmfm pmfm = load(PmfmImpl.class, measurement.getPmfm().getId()); + String value = null; + if (measurement.getQualitativeValue() != null) { + QualitativeValue qualitativeValue = measurement.getQualitativeValue(); + String qualitativeName = load(QualitativeValueImpl.class, qualitativeValue.getId()).getName(); + + value = qualitativeName + " (" + qualitativeValue.getId() + ")"; + } else if (measurement.getNumericalValue() != null) { + value = "" + measurement.getNumericalValue(); + } else if (measurement.getAlphanumericalValue() != null) { + value = measurement.getAlphanumericalValue(); + } + return pmfm.getParameter().getName() + " (" + pmfm.getId() + ") / " + value; + } + + //------------------------------------------------------------------------// + //-- SurveyMeasurement --// + //------------------------------------------------------------------------// + + public SurveyMeasurement setSurveyMeasurement(FishingTrip fishingTrip, + Integer pmfmId, + Float numericalValue, + String alphanumericalValue, + Integer qualitativevalueId) { + SurveyMeasurement result = getSurveyMeasurement(fishingTrip, pmfmId); + + if (result == null) { + result = createSurveyMeasurement(fishingTrip, + pmfmId, + numericalValue, + alphanumericalValue, + qualitativevalueId); + } + + return result; + } + + public SurveyMeasurement removeSurveyMeasurement(FishingTrip fishingTrip, + Integer pmfmId) { + SurveyMeasurement result = getSurveyMeasurement(fishingTrip, pmfmId); + + if (result != null) { + + // measurement found, remove it + result.setFishingTrip(null); + fishingTrip.getSurveyMeasurements().remove(result); + } + + return result; + } + + protected SurveyMeasurement createSurveyMeasurement(FishingTrip fishingTrip, + Integer pmfmId, + Float numericalValue, + String alphanumericalValue, + Integer qualitativevalueId) { + + SurveyMeasurement result = SurveyMeasurement.Factory.newInstance(); + result.setQualityFlag(load(QualityFlagImpl.class, enumeration.QUALITY_FLAG_CODE_NOT_QUALIFIED)); + result.setDepartment(fishingTrip.getRecorderDepartment()); + Pmfm pmfm = load(PmfmImpl.class, pmfmId); + result.setPmfm(pmfm); + result.setFishingTrip(fishingTrip); + + if (alphanumericalValue != null) { + result.setAlphanumericalValue(alphanumericalValue); + } else if (numericalValue != null) { + result.setNumericalValue(numericalValue); + } else if (qualitativevalueId != null) { + result.setQualitativeValue(load(QualitativeValueImpl.class, qualitativevalueId)); + } + + // add it to fishingTrip + if (fishingTrip.getSurveyMeasurements() == null) { + + //create new set of measurements + fishingTrip.setSurveyMeasurements(Sets.<SurveyMeasurement>newHashSet()); + } + + fishingTrip.getSurveyMeasurements().add(result); + + return result; + } + + protected SurveyMeasurement getSurveyMeasurement(FishingTrip fishingTrip, Integer pmfmId) { + SurveyMeasurement result = null; + + for (SurveyMeasurement vum : fishingTrip.getSurveyMeasurements()) { + if (pmfmId.equals(vum.getPmfm().getId())) { + result = vum; + break; + } + } + + return result; + } + protected Integer getRecorderDepartmentId() { // TODO BL : voir si on peut récupérer le departement (du 1er saisisseur ?) return enumeration.DEPARTMENT_ID_UNKNOWN_RECORDER_DEPARTMENT; Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceService.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceService.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceService.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -28,7 +28,6 @@ import fr.ifremer.tutti.persistence.InvalidBatchModelException; import fr.ifremer.tutti.persistence.TuttiPersistenceServiceImplementor; import fr.ifremer.tutti.persistence.entities.data.BatchContainer; -import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatch; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatchFrequency; import fr.ifremer.tutti.persistence.entities.referential.Species; @@ -55,14 +54,14 @@ * * Note: All childs of the batch should be loaded here. * - * @param fishingOperationId if of the fishing operation to seek - * @param sampleCategoryModel [optional] sample category model to check + * @param fishingOperationId if of the fishing operation to seek + * @param validateTree flag to validate sample category model * @return the list of root {@link SpeciesBatch} * @throws InvalidBatchModelException if batch does not respect the sample category model * @since 2.4 */ BatchContainer<SpeciesBatch> getRootSpeciesBatch(String fishingOperationId, - SampleCategoryModel sampleCategoryModel) throws InvalidBatchModelException; + boolean validateTree) throws InvalidBatchModelException; @Transactional(readOnly = false) SpeciesBatch createSpeciesBatch(SpeciesBatch bean, String parentBatchId); @@ -87,7 +86,7 @@ void changeSpeciesBatchSpecies(String batchId, Species species); //------------------------------------------------------------------------// - //-- SpeciesBatchFrequency methods (for species) --// + //-- SpeciesBatchFrequency methods --// //------------------------------------------------------------------------// /** Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceImpl.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -45,18 +45,15 @@ import fr.ifremer.tutti.persistence.entities.data.SpeciesBatchFrequency; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatchFrequencys; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatchs; -import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.persistence.entities.referential.Species; import fr.ifremer.tutti.persistence.service.batch.BatchPersistenceHelper; import fr.ifremer.tutti.persistence.service.batch.BatchTreeHelper; -import org.apache.commons.collections.CollectionUtils; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.springframework.dao.DataIntegrityViolationException; import org.springframework.stereotype.Service; import javax.annotation.Resource; -import java.io.Serializable; import java.util.Collection; import java.util.Collections; import java.util.List; @@ -90,40 +87,26 @@ @Resource(name = "measurementPersistenceHelper") protected MeasurementPersistenceHelper measurementPersistenceHelper; - protected SampleCategoryModel sampleCategoryModel; - - @Override - public void init() { - super.init(); - - sampleCategoryModel = config.getSampleCategoryModel(); - } - //------------------------------------------------------------------------// //-- SpeciesBatch methods --// //------------------------------------------------------------------------// @Override public BatchContainer<SpeciesBatch> getRootSpeciesBatch(String fishingOperationId, - SampleCategoryModel sampleCategoryModel) throws InvalidBatchModelException { + boolean validateTree) throws InvalidBatchModelException { Preconditions.checkNotNull(fishingOperationId); CatchBatch catchBatch = batchHelper.getRootCatchBatchByFishingOperationId(fishingOperationId, false); - // Vrac / Species + // -- Vrac > Species > Alive Itemized SortingBatch vracSpeciesBatch = batchTreeHelper.getSpeciesVracAliveItemizedRootBatch(catchBatch); -// SortingBatch vracSpeciesBatch = batchHelper.getSortingBatch( -// catchBatch, -// "Vrac > Species > Alive Itemized", -// enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_VRAC_ID, -// enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, -// enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED -// ); // container of speciesBatch is arbitraty put on vrac type (there is // no common ancestor for all species batch). - BatchContainer<SpeciesBatch> result = new BatchContainer<SpeciesBatch>(); + BatchContainer<SpeciesBatch> result = new BatchContainer<>(); + SampleCategoryModel sampleCategoryModel = getSampleCategoryModel(); + if (vracSpeciesBatch != null) { result.setId(vracSpeciesBatch.getId()); @@ -141,7 +124,8 @@ } SpeciesBatch target = SpeciesBatchs.newSpeciesBatch(); target.setSpecies(species); - entityToSpeciesBatch(source, target); + + entityToSpeciesBatch(sampleCategoryModel, source, target); result.addChildren(target); if (log.isDebugEnabled()) { @@ -150,13 +134,9 @@ } } - // Hors-Vrac / Species + // -- Hors Vrac > Species SortingBatch horsVracSpeciesBatch = batchTreeHelper.getSpeciesHorsVracRootBatch(catchBatch); -// SortingBatch horsVracSpeciesBatch = batchHelper.getSortingBatch( -// catchBatch, -// "Hors Vrac > Species", -// enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_HORS_VRAC_ID, -// enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES); + if (horsVracSpeciesBatch != null) { for (Batch batch : horsVracSpeciesBatch.getChildBatchs()) { SortingBatch source = (SortingBatch) batch; @@ -171,7 +151,7 @@ } SpeciesBatch target = SpeciesBatchs.newSpeciesBatch(); target.setSpecies(species); - entityToSpeciesBatch(source, target); + entityToSpeciesBatch(sampleCategoryModel, source, target); result.addChildren(target); if (log.isDebugEnabled()) { log.debug("Loaded CatchBatch Hors Vrac > Species > " + target.getSpecies().getReferenceTaxonId() + ": " + target.getId()); @@ -179,7 +159,7 @@ } } - if (sampleCategoryModel != null) { + if (validateTree) { // validate with given sample category model batchHelper.validateSpecies(sampleCategoryModel, result); @@ -235,30 +215,7 @@ @Override public void deleteSpeciesSubBatch(String id) { - Preconditions.checkNotNull(id); - - Integer speciesBatchId = Integer.valueOf(id); - - CatchBatch catchBatch = batchHelper.getRootCatchBatchByBatchId(speciesBatchId); - SortingBatch sortingBatch = batchHelper.getSortingBatchById( - catchBatch, speciesBatchId); - - // get his children - Collection<Batch> childBatchs = sortingBatch.getChildBatchs(); - - if (CollectionUtils.isNotEmpty(childBatchs)) { - - for (Batch childBatch : childBatchs) { - - // delete this child and all his children - Integer childBatchId = childBatch.getId(); - - if (log.isDebugEnabled()) { - log.debug("Delete child [" + childBatchId + "] of species batch: " + id); - } - batchHelper.removeWithChildren(childBatchId); - } - } + batchHelper.deleteSpeciesSubBatch(id); } @Override @@ -283,13 +240,13 @@ Preconditions.checkNotNull(speciesBatchId); List<SortingBatch> frequencyChilds = - batchHelper.getFrequencies(sampleCategoryModel, speciesBatchId); + batchHelper.getFrequencies(speciesBatchId); List<SpeciesBatchFrequency> results = Lists.newArrayList(); for (SortingBatch child : frequencyChilds) { SpeciesBatchFrequency target = SpeciesBatchFrequencys.newSpeciesBatchFrequency(); - entityToSpeciesBatchFrequency(child, target); + batchHelper.entityToBatchFrequency(child, target); results.add(target); } return Collections.unmodifiableList(results); @@ -353,7 +310,7 @@ // Remember child ids, to remove unchanged item (see at bottom in this method) List<Integer> notUpdatedChildIds = Lists.newArrayList(); - List<SortingBatch> frequencyChilds = batchHelper.getFrequencyChilds(sampleCategoryModel, parentBatch); + List<SortingBatch> frequencyChilds = batchHelper.getFrequencyChilds(parentBatch); for (SortingBatch child : frequencyChilds) { notUpdatedChildIds.add(child.getId()); } @@ -426,7 +383,7 @@ //-- Internal methods --// //------------------------------------------------------------------------// - protected SpeciesBatch entityToSpeciesBatch(SortingBatch source, + protected SpeciesBatch entityToSpeciesBatch(SampleCategoryModel sampleCategoryModel, SortingBatch source, SpeciesBatch target) { Preconditions.checkNotNull(target.getSpecies()); @@ -461,13 +418,12 @@ boolean isFrequency = batchHelper.isFrequencyBatch(sampleCategoryModel, source); -// boolean isSamplingCategory = sampleCategoryModel.containsCategoryId(sm.getPmfm().getId()); if (!isFrequency) { Integer qualitativeId = null; if (sm.getQualitativeValue() != null) { qualitativeId = sm.getQualitativeValue().getId(); } - setSampleCategoryQualitative( + batchHelper.setSampleCategoryQualitative( target, sm.getPmfm().getId(), sm.getNumericalValue(), @@ -482,7 +438,7 @@ SortingBatch sourceChild = (SortingBatch) batch; SpeciesBatch targetChild = SpeciesBatchs.newSpeciesBatch(); targetChild.setSpecies(target.getSpecies()); - entityToSpeciesBatch(sourceChild, targetChild); + entityToSpeciesBatch(sampleCategoryModel, sourceChild, targetChild); if (log.isDebugEnabled()) { log.debug("Loaded CatchBatch (Vrac|Hors Vrac) > Species > " + targetChild.getSpecies().getReferenceTaxonId() + " : " + target.getId()); } @@ -500,31 +456,6 @@ return target; } - protected void entityToSpeciesBatchFrequency(SortingBatch source, - SpeciesBatchFrequency target) { - - target.setId(source.getId()); - - // Rank order - target.setRankOrder(Integer.valueOf(source.getRankOrder())); - - target.setNumber(source.getIndividualCount()); - target.setWeight(source.getWeight()); - - Preconditions.checkState(source.getSortingMeasurements().size() == 1, "SortingBatch [" + source.getId() + "] need exactly one sortingMeasurement (to store the length step category), but had " + source.getSortingMeasurements().size()); - SortingMeasurement sm = source.getSortingMeasurements().iterator().next(); - Preconditions.checkNotNull(sm.getPmfm(), "SortingMeasurement [" + sm.getId() + "] can not have a null pmfm"); - Preconditions.checkNotNull(sm.getPmfm().getId(), "SortingMeasurement [" + sm.getId() + "] can not have a pmfm with null id"); - - // Length step category - Caracteristic lengthStepCaracteristic = - referentialService.getCaracteristic(sm.getPmfm().getId()); - target.setLengthStepCaracteristic(lengthStepCaracteristic); - - // Length - target.setLengthStep(sm.getNumericalValue()); - } - protected void speciesBatchToEntity(SpeciesBatch source, SortingBatch target, String parentBatchId, @@ -738,26 +669,4 @@ } } - protected void setSampleCategoryQualitative(SpeciesBatch target, - Integer pmfmId, - Float numericalvalue, - String alphanumericalValue, - Integer qualitativeValueId) { - // skip if null or corresponding to the SORTING_TYPE PMFM (Espèce, Benthos, Plancton, etc.) - if (pmfmId == null || pmfmId.equals(enumeration.PMFM_ID_SORTING_TYPE)) { - return; - } - - boolean isSamplingCategory = sampleCategoryModel.containsCategoryId(pmfmId); - Preconditions.checkNotNull(isSamplingCategory, "Unable to find corresponding SampleCategoryEnum for PMFM.ID : " + pmfmId); - - target.setSampleCategoryId(pmfmId); - Serializable categoryValue = batchHelper.getSampleCategoryQualitative( - pmfmId, - numericalvalue, - alphanumericalValue, - qualitativeValueId); - target.setSampleCategoryValue(categoryValue); - } - } Added: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SynchronizationStatusHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SynchronizationStatusHelper.java (rev 0) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SynchronizationStatusHelper.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -0,0 +1,85 @@ +package fr.ifremer.tutti.persistence.service; + +import fr.ifremer.adagio.core.dao.data.batch.Batch; +import fr.ifremer.adagio.core.dao.data.batch.CatchBatch; +import fr.ifremer.adagio.core.dao.data.sample.Sample; +import fr.ifremer.adagio.core.dao.data.survey.fishingTrip.FishingTrip; +import fr.ifremer.adagio.core.dao.data.survey.scientificCruise.ScientificCruise; +import fr.ifremer.adagio.core.dao.technical.synchronization.SynchronizationStatus; +import org.hibernate.type.IntegerType; +import org.hibernate.type.StringType; +import org.springframework.stereotype.Component; + +/** + * Helper around SynchronizationStatus. + * + * Created on 4/22/14. + * + * @author Tony Chemit <chemit(a)codelutin.com> + * @since 3.5 + */ +@Component("synchronizationStatusHelper") +public class SynchronizationStatusHelper extends AbstractPersistenceService { + + public void setDirty(ScientificCruise scientificCruise) { + String synchronizationStatus = getDirtyValue(); + scientificCruise.setSynchronizationStatus(synchronizationStatus); + } + + public void setDirty(FishingTrip fishingTrip) { + String synchronizationStatus = getDirtyValue(); + fishingTrip.setSynchronizationStatus(synchronizationStatus); + setDirty(fishingTrip.getScientificCruise()); + } + + public void setDirty(CatchBatch catchBatch) { + String synchronizationStatus = getDirtyValue(); + catchBatch.setSynchronizationStatus(synchronizationStatus); + setDirty(catchBatch.getFishingOperation().getFishingTrip()); + } + + public void setDirty(Sample sample) { + String synchronizationStatus = getDirtyValue(); + sample.setSynchronizationStatus(synchronizationStatus); + Batch batch = sample.getBatch(); + if (batch != null && batch instanceof CatchBatch) { + setDirty((CatchBatch) batch); + } else { + setDirty(sample.getFishingOperation().getFishingTrip()); + } + } + + public void setReadyToSynch(String cruiseId) { + + String oldStatus = getDirtyValue(); + String newStatus = SynchronizationStatus.READY_TO_SYNCHRONIZE.getValue(); + + // update scientificCruise + queryUpdate("updateScientificCruiseSynchronizationStatus", + "cruiseId", IntegerType.INSTANCE, cruiseId, + "oldStatus", StringType.INSTANCE, oldStatus, + "newStatus", StringType.INSTANCE, newStatus); + + // update fishingTrip + queryUpdate("updateFishingTripSynchronizationStatus", + "cruiseId", IntegerType.INSTANCE, cruiseId, + "oldStatus", StringType.INSTANCE, oldStatus, + "newStatus", StringType.INSTANCE, newStatus); + + // update catchBatch + queryUpdate("updateCatchBatchSynchronizationStatus", + "cruiseId", IntegerType.INSTANCE, cruiseId, + "oldStatus", StringType.INSTANCE, oldStatus, + "newStatus", StringType.INSTANCE, newStatus); + + // update sample + queryUpdate("updateSampleSynchronizationStatus", + "cruiseId", IntegerType.INSTANCE, cruiseId, + "oldStatus", StringType.INSTANCE, oldStatus, + "newStatus", StringType.INSTANCE, newStatus); + } + + protected String getDirtyValue() { + return SynchronizationStatus.DIRTY.getValue(); + } +} Property changes on: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/SynchronizationStatusHelper.java ___________________________________________________________________ Added: svn:keywords + Author Date Id Revision Added: svn:eol-style + native Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchPersistenceHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchPersistenceHelper.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchPersistenceHelper.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -42,6 +42,8 @@ import fr.ifremer.tutti.persistence.entities.data.BatchContainer; import fr.ifremer.tutti.persistence.entities.data.BenthosBatch; import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; +import fr.ifremer.tutti.persistence.entities.data.SpeciesAbleBatch; +import fr.ifremer.tutti.persistence.entities.data.SpeciesAbleBatchFrequency; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatch; import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; @@ -51,6 +53,8 @@ import fr.ifremer.tutti.persistence.service.IndividualObservationBatchPersistenceService; import fr.ifremer.tutti.persistence.service.ReferentialPersistenceService; import org.apache.commons.collections.CollectionUtils; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; import org.springframework.dao.DataIntegrityViolationException; import org.springframework.dao.DataRetrievalFailureException; import org.springframework.stereotype.Component; @@ -58,6 +62,7 @@ import javax.annotation.Resource; import java.io.Serializable; import java.text.MessageFormat; +import java.util.Collection; import java.util.List; import static org.nuiton.i18n.I18n.t; @@ -71,9 +76,9 @@ @Component("batchPersistenceHelper") public class BatchPersistenceHelper extends AbstractPersistenceService { -// /** Logger. */ -// private static final Log log = -// LogFactory.getLog(BatchPersistenceHelper.class); + /** Logger. */ + private static final Log log = + LogFactory.getLog(BatchPersistenceHelper.class); @Resource(name = "referentialPersistenceService") protected ReferentialPersistenceService referentialService; @@ -93,9 +98,6 @@ @Resource(name = "scientificCruiseCatchBatchValidator") protected TuttiCatchBatchValidator catchBatchValidator; -// @Resource(name = "measurementPersistenceHelper") -// protected MeasurementPersistenceHelper measurementPersistenceHelper; - @Resource(name = "batchTreeHelper") protected BatchTreeHelper batchTreeHelper; @@ -219,18 +221,11 @@ catchBatchDao.updateSortingBatch(sortingBatch, parentCatchBatch); } -// public SortingMeasurement getInheritedSortingMeasurement(SortingBatch sortingBatch) { -// return catchBatchDao.getInheritedSortingMeasurement(sortingBatch, enumeration.PMFM_ID_SORTED_UNSORTED); -// } - -// public QuantificationMeasurement setWeightMeasurementQuantificationMeasurement(Batch batch, Float weightValue) { -// return catchBatchDao.setQuantificationMeasurement(batch, enumeration.PMFM_ID_WEIGHT_MEASURED, getRecorderDepartmentId(), weightValue, true); -// } - - public List<SortingBatch> getFrequencyChilds(SampleCategoryModel sampleCategoryModel, - SortingBatch sortingBatch) { + public List<SortingBatch> getFrequencyChilds(SortingBatch sortingBatch) { List<SortingBatch> result = Lists.newArrayList(); + SampleCategoryModel sampleCategoryModel = getSampleCategoryModel(); + for (Batch batch : sortingBatch.getChildBatchs()) { SortingBatch child = (SortingBatch) batch; if (isFrequencyBatch(sampleCategoryModel, child)) { @@ -240,16 +235,15 @@ return result; } - public List<SortingBatch> getFrequencies(SampleCategoryModel sampleCategoryModel, - String batchId) { + public List<SortingBatch> getFrequencies(String batchId) { Preconditions.checkNotNull(batchId); Integer sortingBatchId = Integer.valueOf(batchId); CatchBatch catchBatch = getRootCatchBatchByBatchId(sortingBatchId); SortingBatch sortingBatch = catchBatchDao.getSortingBatchById( catchBatch, sortingBatchId); - List<SortingBatch> frequencyChilds = getFrequencyChilds(sampleCategoryModel, - sortingBatch); + List<SortingBatch> frequencyChilds = getFrequencyChilds( + sortingBatch); return frequencyChilds; } @@ -331,69 +325,41 @@ if (enumeration.QUALITATIVE_VRAC_ID.equals(qualitativeValueId)) { - // get vrac / Species / Alive itemized batch + // -- Vrac > Species > Alive itemized parentBatch = batchTreeHelper.getSpeciesVracAliveItemizedRootBatch(catchBatch); -// parentBatch = getSortingBatch( -// catchBatch, -// "Vrac > Species > Alive Itemized", -// enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_VRAC_ID, -// enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, -// enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED); if (parentBatch == null) { - // get vrac batch - + // -- Vrac SortingBatch vracBatch = batchTreeHelper.getVracBatch(catchBatch); -// SortingBatch vracBatch = getSortingBatch( -// catchBatch, -// "Vrac", -// enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_VRAC_ID); if (vracBatch == null) { - - // create vrac batch vracBatch = batchTreeHelper.getOrCreateVracBatch(catchBatch, null, null); } - // get vrac > species batch - + // -- Vrac > Species SortingBatch vracSpeciesBatch = batchTreeHelper.getSpeciesVracRootBatch(vracBatch); -// SortingBatch vracSpeciesBatch = getSortingBatch( -// vracBatch, -// "Vrac > Species", -// enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES); if (vracSpeciesBatch == null) { - - // create vrac > species batch vracSpeciesBatch = batchTreeHelper.getOrCreateSpeciesVracRootBatch(catchBatch, vracBatch, null); } - // create vrac > species > Alive itemized batch - + // -- Vrac > Species > Alive itemized parentBatch = batchTreeHelper.getOrCreateSpeciesVracAliveItemizedRootBatch(catchBatch, vracSpeciesBatch); } } else if (enumeration.QUALITATIVE_HORS_VRAC_ID.equals(qualitativeValueId)) { - // get hors vrac > Species batch + // -- Hors Vrac > Species parentBatch = batchTreeHelper.getSpeciesHorsVracRootBatch(catchBatch); -// parentBatch = getSortingBatch( -// catchBatch, -// "Hors vrac > Species", -// enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_HORS_VRAC_ID, -// enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES); if (parentBatch == null) { - // get (or create) hors vrac batch + // -- Hors Vrac SortingBatch horsVracBatch = batchTreeHelper.getOrCreateHorsVracBatch(catchBatch); - // create hors vrac > species batch - parentBatch = batchTreeHelper.getOrCreateSpeciesHorsVracRootBatch( - catchBatch, - horsVracBatch); + // -- Hors Vrac > Species + parentBatch = batchTreeHelper.getOrCreateSpeciesHorsVracRootBatch(catchBatch, horsVracBatch); } } else { @@ -438,70 +404,41 @@ if (enumeration.QUALITATIVE_VRAC_ID.equals(qualitativeValueId)) { - // Vrac > Benthos > Alive Itemized + // -- Vrac > Benthos > Alive Itemized parentBatch = batchTreeHelper.getBenthosVracAliveItemizedRootBatch(catchBatch); -// parentBatch = getSortingBatch( -// catchBatch, -// "Vrac > Species > Alive Itemized", -// enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_VRAC_ID, -// enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS, -// enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED); if (parentBatch == null) { - // get vrac batch - + // -- Vrac SortingBatch vracBatch = batchTreeHelper.getVracBatch(catchBatch); -// SortingBatch vracBatch = getSortingBatch( -// catchBatch, -// "Vrac", -// enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_VRAC_ID); if (vracBatch == null) { - - // create vrac batch vracBatch = batchTreeHelper.getOrCreateVracBatch(catchBatch, null, null); } - // get vrac > Benthos batch - + // -- Vrac > Benthos SortingBatch vracBenthosBatch = batchTreeHelper.getBenthosVracRootBatch(vracBatch); -// SortingBatch vracBenthosBatch = getSortingBatch( -// vracBatch, -// "Vrac > Benthos", -// enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS); if (vracBenthosBatch == null) { - - // create vrac > Benthos batch vracBenthosBatch = batchTreeHelper.getOrCreateBenthosVracRootBatch(catchBatch, vracBatch, null); } - // create vrac > Benthos > Alive itemized batch - + // -- Vrac > Benthos > Alive itemized parentBatch = batchTreeHelper.getOrCreateBenthosVracAliveItemizedRootBatch(catchBatch, vracBenthosBatch); } } else if (enumeration.QUALITATIVE_HORS_VRAC_ID.equals(qualitativeValueId)) { - // get hors-vrac > Benthos batch + // -- Hors Vrac > Benthos parentBatch = batchTreeHelper.getBenthosHorsVracRootBatch(catchBatch); -// parentBatch = getSortingBatch( -// catchBatch, -// "Hors vrac > Benthos", -// enumeration.PMFM_ID_SORTED_UNSORTED, enumeration.QUALITATIVE_HORS_VRAC_ID, -// enumeration.PMFM_ID_SORTING_TYPE, enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS); if (parentBatch == null) { - // get (or create) hors vrac batch - + // -- Hors Vrac SortingBatch horsVracBatch = batchTreeHelper.getOrCreateHorsVracBatch(catchBatch); - // create hors vrac > Benthos batch - parentBatch = batchTreeHelper.getOrCreateBenthosHorsVracRootBatch( - catchBatch, - horsVracBatch); + // -- Hors Vrac > Benthos + parentBatch = batchTreeHelper.getOrCreateBenthosHorsVracRootBatch(catchBatch, horsVracBatch); } } else { @@ -518,12 +455,15 @@ Preconditions.checkNotNull(target); + // -- Hors Vrac > Marine Litter SortingBatch parentBatch = batchTreeHelper.getMarineLitterRootBatch(catchBatch); if (parentBatch == null) { + // -- Hors Vrac SortingBatch horsVracBatch = batchTreeHelper.getOrCreateHorsVracBatch(catchBatch); + // -- Hors Vrac > Marine Litter parentBatch = batchTreeHelper.getOrCreateMarineLitterRootBatch(catchBatch, horsVracBatch, null); } @@ -545,342 +485,80 @@ return qualitativeValueId; } -// public SortingBatch getSortingBatch(Batch source, -// String debugMessage, -// Integer... ids) { -// -// return getSortingBatch(source.getChildBatchs(), debugMessage, ids); -// } + public void deleteSpeciesSubBatch(String id) { + Preconditions.checkNotNull(id); -// public SortingBatch getSortingBatch(Collection<Batch> childs, -// String debugMessage, -// Integer... ids) { -// -// int nbParams = ids.length / 2; -// -// Object[] params = new Object[nbParams * 3]; -// for (int i = 0; i < nbParams; i++) { -// Integer sortingPmfmId = ids[2 * i]; -// Integer sortingQualitativeValueId = ids[2 * i + 1]; -// params[3 * i] = CatchBatchExtendDao.PMFM_ID; -// params[3 * i + 1] = sortingPmfmId; -// params[3 * i + 2] = sortingQualitativeValueId; -// } -// SortingBatch result = catchBatchDao.getSortingBatch(childs, params); -// if (result != null && debugMessage != null && log.isDebugEnabled()) { -// log.debug("Loaded " + debugMessage + ": " + result.getId()); -// } -// return result; -// } + Integer speciesBatchId = Integer.valueOf(id); -// public SortingBatch getVracBatch(CatchBatch batch) { -// return get( -// batch, -// enumeration.PMFM_ID_SORTED_UNSORTED, -// enumeration.QUALITATIVE_VRAC_ID -// ); -// } + CatchBatch catchBatch = getRootCatchBatchByBatchId(speciesBatchId); + SortingBatch sortingBatch = getSortingBatchById(catchBatch, speciesBatchId); -// public SortingBatch getOrCreateVracBatch(CatchBatch batch, -// Float weight, -// Float weightBeforeSampling) { -// return getOrCreate( -// batch, -// batch, -// enumeration.PMFM_ID_SORTED_UNSORTED, -// enumeration.QUALITATIVE_VRAC_ID, -// weight, -// weightBeforeSampling, -// (short) 1 -// ); -// } + // get his children + Collection<Batch> childBatchs = sortingBatch.getChildBatchs(); -// public SortingBatch getSpeciesVracRootBatch(SortingBatch batch) { -// return get( -// batch, -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES -// ); -// } + if (CollectionUtils.isNotEmpty(childBatchs)) { -// public SortingBatch getOrCreateSpeciesVracRootBatch(CatchBatch target, -// SortingBatch batch, -// Float totalWeight) { -// return getOrCreate( -// target, -// batch, -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, -// totalWeight, -// (short) 1 -// ); -// } + for (Batch childBatch : childBatchs) { -// public SortingBatch getSpeciesVracAliveNotItemizedRootBatch(SortingBatch batch) { -// return get( -// batch, -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED -// ); -// } + // delete this child and all his children + Integer childBatchId = childBatch.getId(); -// public SortingBatch getOrCreateSpeciesVracAliveNotItemizedRootBatch(CatchBatch target, -// SortingBatch batch, -// Float totalWeight) { -// return getOrCreate( -// target, -// batch, -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED, -// totalWeight, -// (short) 1 -// ); -// } + if (log.isDebugEnabled()) { + log.debug("Delete child [" + childBatchId + "] of species batch: " + id); + } + removeWithChildren(childBatchId); + } + } + } -// public SortingBatch getSpeciesVracInertRootBatch(SortingBatch batch) { -// return get( -// batch, -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT -// ); -// } -// public SortingBatch getOrCreateSpeciesVracInertRootBatch(CatchBatch target, -// SortingBatch batch, -// Float totalWeight) { -// return getOrCreate( -// target, -// batch, -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT, -// totalWeight, -// (short) 2 -// ); -// } + public <S extends SpeciesAbleBatch> void setSampleCategoryQualitative(S target, + Integer pmfmId, + Float numericalvalue, + String alphanumericalValue, + Integer qualitativeValueId) { + // skip if null or corresponding to the SORTING_TYPE PMFM (Espèce, Benthos, Plancton, etc.) + if (pmfmId == null || pmfmId.equals(enumeration.PMFM_ID_SORTING_TYPE)) { + return; + } + SampleCategoryModel sampleCategoryModel = getSampleCategoryModel(); -// public SortingBatch getSpeciesVracAliveItemizeRootBatch( -// SortingBatch batch) { -// return get( -// batch, -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED -// ); -// } + boolean isSamplingCategory = sampleCategoryModel.containsCategoryId(pmfmId); + Preconditions.checkNotNull(isSamplingCategory, "Unable to find corresponding SampleCategoryEnum for PMFM.ID : " + pmfmId); -// public SortingBatch getOrCreateSpeciesVracAliveItemizedRootBatch(CatchBatch target, -// SortingBatch batch) { -// return getOrCreate( -// target, -// batch, -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED, -// null, -// (short) 3 -// ); -// } + target.setSampleCategoryId(pmfmId); + Serializable categoryValue = getSampleCategoryQualitative( + pmfmId, + numericalvalue, + alphanumericalValue, + qualitativeValueId); + target.setSampleCategoryValue(categoryValue); + } -// public SortingBatch getBenthosVracRootBatch( -// SortingBatch batch) { -// return get( -// batch, -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS -// ); -// } + public <F extends SpeciesAbleBatchFrequency & TuttiEntity> void entityToBatchFrequency(SortingBatch source, + F target) { -// public SortingBatch getOrCreateBenthosVracRootBatch(CatchBatch target, -// SortingBatch batch, -// Float totalWeight) { -// return getOrCreate( -// target, -// batch, -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS, -// totalWeight, -// (short) 2 -// ); -// } + target.setId(source.getId()); -// public SortingBatch getBenthosVracAliveNotItemizedRootBatch( -// SortingBatch batch) { -// return get( -// batch, -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED -// ); -// } + // Rank order + target.setRankOrder(Integer.valueOf(source.getRankOrder())); -// public SortingBatch getOrCreateBenthosVracAliveNotItemizedRootBatch(CatchBatch target, -// SortingBatch batch, -// Float totalWeight) { -// return getOrCreate( -// target, -// batch, -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED, -// totalWeight, -// (short) 1 -// ); -// } + target.setNumber(source.getIndividualCount()); + target.setWeight(source.getWeight()); -// public SortingBatch getBenthosVracInertRootBatch(SortingBatch batch) { -// return get( -// batch, -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT -// ); -// } + Preconditions.checkState(source.getSortingMeasurements().size() == 1, "SortingBatch [" + source.getId() + "] need exactly one sortingMeasurement (to store the length step category), but had " + source.getSortingMeasurements().size()); + SortingMeasurement sm = source.getSortingMeasurements().iterator().next(); + Preconditions.checkNotNull(sm.getPmfm(), "SortingMeasurement [" + sm.getId() + "] can not have a null pmfm"); + Preconditions.checkNotNull(sm.getPmfm().getId(), "SortingMeasurement [" + sm.getId() + "] can not have a pmfm with null id"); -// public SortingBatch getOrCreateBenthosVracInertRootBatch(fr.ifremer.adagio.core.dao.data.batch.CatchBatch target, -// SortingBatch batch, -// Float totalWeight) { -// return getOrCreate( -// target, -// batch, -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT, -// totalWeight, -// (short) 2 -// ); -// } + // Length step category + Caracteristic lengthStepCaracteristic = referentialService.getCaracteristic(sm.getPmfm().getId()); + target.setLengthStepCaracteristic(lengthStepCaracteristic); -// public SortingBatch getBenthosVracAliveItemizeRootBatch(SortingBatch batch) { -// return get( -// batch, -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED -// ); -// } + // Length + target.setLengthStep(sm.getNumericalValue()); + } -// public SortingBatch getOrCreateBenthosVracAliveItemizedRootBatch(CatchBatch target, -// SortingBatch batch) { -// return getOrCreate( -// target, -// batch, -// enumeration.PMFM_ID_SORTING_TYPE_2, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED, -// null, -// (short) 3 -// ); -// } - -// public SortingBatch getHorsVracBatch(CatchBatch batch) { -// return get( -// batch, -// enumeration.PMFM_ID_SORTED_UNSORTED, -// enumeration.QUALITATIVE_HORS_VRAC_ID -// ); -// } - -// public SortingBatch getOrCreateHorsVracBatch(CatchBatch batch) { -// return getOrCreate( -// batch, -// batch, -// enumeration.PMFM_ID_SORTED_UNSORTED, -// enumeration.QUALITATIVE_HORS_VRAC_ID, -// null, -// (short) 2 -// ); -// } - -// public SortingBatch getSpeciesHorsVracRootBatch(SortingBatch batch) { -// return get( -// batch, -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES -// ); -// } - -// public SortingBatch getOrCreateSpeciesHorsVracRootBatch(CatchBatch target, -// SortingBatch batch) { -// return getOrCreate( -// target, -// batch, -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_SPECIES, -// null, -// (short) 1 -// ); -// } - -// public SortingBatch getBenthosHorsVracRootBatch(SortingBatch batch) { -// return get( -// batch, -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS -// ); -// } - -// public SortingBatch getOrCreateBenthosHorsVracRootBatch(CatchBatch target, -// SortingBatch batch) { -// return getOrCreate( -// target, -// batch, -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_BENTHOS, -// null, -// (short) 2 -// ); -// } - -// public SortingBatch getMarineLitterRootBatch(SortingBatch batch) { -// return get( -// batch, -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_MARINE_LITTER -// ); -// } - -// public SortingBatch getOrCreateMarineLitterRootBatch(CatchBatch target, -// SortingBatch batch, -// Float totalWeight) { -// return getOrCreate( -// target, -// batch, -// enumeration.PMFM_ID_SORTING_TYPE, -// enumeration.QUALITATIVE_ID_SORTING_TYPE_MARINE_LITTER, -// totalWeight, -// (short) 3 -// ); -// } - -// public SortingBatch getRejectedBatch(CatchBatch batch) { -// return get( -// batch, -// enumeration.PMFM_ID_SORTED_UNSORTED, -// enumeration.QUALITATIVE_UNSORTED_ID -// ); -// } - -// public SortingBatch getOrCreateRejectedBatch(CatchBatch batch, -// Float weight) { -// -// return getOrCreate( -// batch, -// batch, -// enumeration.PMFM_ID_SORTED_UNSORTED, -// enumeration.QUALITATIVE_UNSORTED_ID, -// weight, -// (short) 3 -// ); -// } - -// public SortingMeasurement setSortingMeasurement( -// SortingBatch sortingBatch, -// Integer pmfmId, -// Serializable value) { -// Preconditions.checkNotNull(pmfmId); -// Preconditions.checkNotNull(value); -// -// Caracteristic caracteristic = referentialService.getCaracteristic(pmfmId); -// SortingMeasurement sortingMeasurement = catchBatchDao.getSortingMeasurement( -// sortingBatch, pmfmId, getRecorderDepartmentId(), true); -// measurementPersistenceHelper.setMeasurement(sortingMeasurement, -// caracteristic, -// value); -// return sortingMeasurement; -// } - public Serializable getSampleCategoryQualitative(Integer pmfmId, Float numericalvalue, String alphanumericalValue, Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchTreeHelper.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchTreeHelper.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/BatchTreeHelper.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -3,22 +3,19 @@ import com.google.common.base.Joiner; import com.google.common.collect.Sets; import fr.ifremer.adagio.core.dao.data.batch.Batch; +import fr.ifremer.adagio.core.dao.data.batch.Batchs; import fr.ifremer.adagio.core.dao.data.batch.CatchBatch; import fr.ifremer.adagio.core.dao.data.batch.CatchBatchExtendDao; import fr.ifremer.adagio.core.dao.data.batch.SortingBatch; import fr.ifremer.adagio.core.dao.data.measure.QuantificationMeasurement; import fr.ifremer.adagio.core.dao.data.measure.SortingMeasurement; import fr.ifremer.adagio.core.dao.referential.QualityFlagImpl; -import fr.ifremer.adagio.core.dao.referential.pmfm.Pmfm; import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxon; -import fr.ifremer.tutti.persistence.entities.referential.Caracteristic; -import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; -import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValues; -import fr.ifremer.tutti.persistence.entities.referential.Species; +import fr.ifremer.adagio.core.dao.referential.taxon.ReferenceTaxonImpl; import fr.ifremer.tutti.persistence.service.AbstractPersistenceService; import fr.ifremer.tutti.persistence.service.MeasurementPersistenceHelper; -import fr.ifremer.tutti.persistence.service.ReferentialPersistenceService; import org.apache.commons.lang3.StringUtils; +import org.apache.commons.lang3.SystemUtils; import org.apache.commons.lang3.builder.ToStringBuilder; import org.apache.commons.lang3.builder.ToStringStyle; import org.apache.commons.logging.Log; @@ -47,15 +44,14 @@ /** Logger. */ private static final Log log = LogFactory.getLog(BatchTreeHelper.class); - @Resource(name = "referentialPersistenceService") - protected ReferentialPersistenceService referentialService; - @Resource(name = "measurementPersistenceHelper") protected MeasurementPersistenceHelper measurementPersistenceHelper; @Resource(name = "catchBatchDao") protected CatchBatchExtendDao catchBatchDao; + protected Comparator<Batch> batchComparator = Batchs.newRankOrderComparator(); + //------------------------------------------------------------------------// //-- Get CatchBatch navigation methods --// //------------------------------------------------------------------------// @@ -161,7 +157,7 @@ public SortingBatch getSpeciesVracAliveNotItemizedRootBatch(SortingBatch batch) { return getSortingBatch( batch, - "Vrac > Species" + " > Alive not itemized", + "Vrac > Species > Alive not itemized", enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED ); @@ -170,7 +166,7 @@ public SortingBatch getBenthosVracAliveNotItemizedRootBatch(SortingBatch batch) { return getSortingBatch( batch, - "Vrac > Benthos" + " > Alive not itemized", + "Vrac > Benthos > Alive not itemized", enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_NOT_ITEMIZED ); @@ -179,7 +175,7 @@ public SortingBatch getSpeciesVracInertRootBatch(SortingBatch batch) { return getSortingBatch( batch, - "Vrac > Species" + " > Inert (not alive)", + "Vrac > Species > Inert (not alive)", enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT ); @@ -188,7 +184,7 @@ public SortingBatch getBenthosVracInertRootBatch(SortingBatch batch) { return getSortingBatch( batch, - "Vrac > Benthos" + " > Inert (not alive)", + "Vrac > Benthos > Inert (not alive)", enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_INERT ); @@ -197,7 +193,7 @@ public SortingBatch getSpeciesVracAliveItemizedRootBatch(SortingBatch batch) { return getSortingBatch( batch, - "Vrac > Species" + " > Alive itemized", + "Vrac > Species > Alive itemized", enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED ); @@ -206,7 +202,7 @@ public SortingBatch getBenthosVracAliveItemizedRootBatch(SortingBatch batch) { return getSortingBatch( batch, - "Vrac > Benthos" + " > Alive itemized", + "Vrac > Benthos > Alive itemized", enumeration.PMFM_ID_SORTING_TYPE_2, enumeration.QUALITATIVE_ID_SORTING_TYPE_2_ALIVE_ITEMIZED ); @@ -603,29 +599,22 @@ } } - final Comparator<Batch> batchComparator = new Comparator<Batch>() { - @Override - public int compare(Batch b1, Batch b2) { - return (b1.getRankOrder() == null) ? 0 : b1.getRankOrder().compareTo(b2.getRankOrder()); - } - }; + protected void displayBatch(Batch batch, int level, StringBuilder sb) { - private void displayBatch(Batch batch, int level, StringBuilder sb) { + ToStringStyle style = new BatchTreeToStringStyle(); - ToStringBuilder builder = new ToStringBuilder(batch, ToStringStyle.MULTI_LINE_STYLE); + ToStringBuilder builder = new ToStringBuilder(batch, style); builder.append("id", batch.getId()); - if (batch.getParentBatch() != null) { - builder.append("parentId", batch.getParentBatch().getId()); - } builder.append("rankOrder", batch.getRankOrder()); - builder.append("level", level); - if (batch.getWeight() != null) { - builder.append("weight", batch.getWeight()); +// builder.append("level", level); +// if (batch.getParentBatch() != null) { +// builder.append("parentId", batch.getParentBatch().getId()); +// } + + if (batch instanceof CatchBatch) { + CatchBatch catchBatch = (CatchBatch) batch; + builder.append("synchronizationStatus", catchBatch.getSynchronizationStatus()); } - if (batch.getWeightBeforeSampling() != null) { - builder.append("weightBeforeSampling", batch.getWeightBeforeSampling()); - } -// builder.append("qualityFlag", batch.getQualityFlag().getName()); if (batch instanceof SortingBatch) { SortingBatch sortingBatch = (SortingBatch) batch; if (sortingBatch.getSamplingRatio() != null) { @@ -634,45 +623,39 @@ if (sortingBatch.getSamplingRatioText() != null) { builder.append("samplingRatioText", sortingBatch.getSamplingRatioText()); } + if (sortingBatch.getIndividualCount() != null) { + builder.append("individualCount", sortingBatch.getIndividualCount()); + } if (sortingBatch.getReferenceTaxon() != null) { ReferenceTaxon referenceTaxon = sortingBatch.getReferenceTaxon(); - Species speciesByReferenceTaxonId = referentialService.getSpeciesByReferenceTaxonId(referenceTaxon.getId()); - builder.append("referenceTaxon", speciesByReferenceTaxonId.getName()); + builder.append("referenceTaxon", load(ReferenceTaxonImpl.class, referenceTaxon.getId()).getName()); } - if (sortingBatch.getSortingMeasurements() != null) { - for (SortingMeasurement sortingMeasurement : sortingBatch.getSortingMeasurements()) { - Caracteristic sortingMeasurementPmfm = getPmfm(sortingMeasurement.getPmfm()); - builder.append("sortingMeasurement.pmfm", sortingMeasurementPmfm.getParameterName() + " (" + sortingMeasurementPmfm.getId() + ")"); - if (sortingMeasurement.getQualitativeValue() != null) { - CaracteristicQualitativeValue caracteristicQualitativeValue = CaracteristicQualitativeValues.getCaracteristicQualitativeValue(sortingMeasurementPmfm, sortingMeasurement.getQualitativeValue().getId()); - if (caracteristicQualitativeValue == null && sortingMeasurement.getQualitativeValue().getId() == 2146) { - builder.append("sortingMeasurement.qualitativeValue", "Unsorted"); - } else { - builder.append("sortingMeasurement.qualitativeValue", caracteristicQualitativeValue.getName() + " (" + caracteristicQualitativeValue.getId() + ")"); - } - } - if (sortingMeasurement.getNumericalValue() != null) { - builder.append("sortingMeasurement.numericalValue", sortingMeasurement.getNumericalValue()); - } - } + + SortingMeasurement sm = null; + if (sortingBatch.getSortingMeasurements() != null && sortingBatch.getSortingMeasurements().size() == 1) { + sm = sortingBatch.getSortingMeasurements().iterator().next(); + } else if (sortingBatch.getReferenceTaxon() != null && sortingBatch.getReferenceTaxon().getId() != null) { + sm = measurementPersistenceHelper.getInheritedSortingMeasurement(sortingBatch); } + if (sm != null) { + String sortingMeasurementStr = measurementPersistenceHelper.toString(sm); + builder.append("sortingMeasurement", sortingMeasurementStr); + } } QuantificationMeasurement quantificationMeasurement = measurementPersistenceHelper.getWeightMeasurementQuantificationMeasurement(batch); if (quantificationMeasurement != null) { - - builder.append("quantificationMeasurement.isReferenceQuantification", quantificationMeasurement.getIsReferenceQuantification()); - - Caracteristic quantificationMeasurementPmfm = getPmfm(quantificationMeasurement.getPmfm()); - builder.append("quantificationMeasurement.pmfm", quantificationMeasurementPmfm.getParameterName() + " (" + quantificationMeasurementPmfm.getId() + ")"); - - if (quantificationMeasurement.getQualitativeValue() != null) { - CaracteristicQualitativeValue caracteristicQualitativeValue = CaracteristicQualitativeValues.getCaracteristicQualitativeValue(quantificationMeasurementPmfm, quantificationMeasurement.getQualitativeValue().getId()); - builder.append("quantificationMeasurement.qualitativeValue", caracteristicQualitativeValue.getName() + " (" + caracteristicQualitativeValue.getId() + ")"); - } - if (quantificationMeasurement.getNumericalValue() != null) { - builder.append("quantificationMeasurement.numericalValue", quantificationMeasurement.getNumericalValue()); - } + String quantificationMeasurementStr = measurementPersistenceHelper.toString(quantificationMeasurement); + builder.append("weightQuantificationMeasurement", quantificationMeasurementStr); + builder.append("weightQuantificationMeasurement.isReferenceQuantification", quantificationMeasurement.getIsReferenceQuantification()); } + if (batch.getWeight() != null) { + builder.append("weight", batch.getWeight()); + } + if (batch.getWeightBeforeSampling() != null) { + builder.append("weightBeforeSampling", batch.getWeightBeforeSampling()); + } + builder.append("qualityFlag", load(QualityFlagImpl.class, batch.getQualityFlag().getCode()).getName()); + String prefix = "\n" + StringUtils.leftPad("", 2 * level); String batchStr = Joiner.on(prefix).join(builder.build().split("\n")); sb.append(prefix).append(batchStr); @@ -686,8 +669,19 @@ } } - protected Caracteristic getPmfm(Pmfm pmfm) { - Caracteristic caracteristic = referentialService.getCaracteristic(pmfm.getId()); - return caracteristic; + + static final class BatchTreeToStringStyle extends ToStringStyle { + + private static final long serialVersionUID = 1L; + + BatchTreeToStringStyle() { + super(); + this.setUseClassName(true); + this.setUseShortClassName(true); + this.setContentStart(""); + this.setFieldSeparator(SystemUtils.LINE_SEPARATOR + " | "); + this.setFieldSeparatorAtStart(true); + this.setContentEnd(""); + } } } Modified: trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/ScientificCruiseCatchBatchValidator.java =================================================================== --- trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/ScientificCruiseCatchBatchValidator.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/batch/ScientificCruiseCatchBatchValidator.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -150,7 +150,7 @@ protected void validateCatchBatch(CatchBatch batch, List<CatchBatchValidationError> errors) { - // Vrac + // -- Vrac SortingBatch vracBatch = batchTreeHelper.getVracBatch(batch); if (log.isDebugEnabled()) { @@ -160,10 +160,10 @@ if (vracBatch == null) { addError(errors, n("tutti.persistence.batch.validation.vracNotFound")); } else { - // Vrac > Species + // -- Vrac > Species SortingBatch speciesBatch = batchTreeHelper.getSpeciesVracRootBatch(vracBatch); - // Vrac > Benthos + // -- Vrac > Benthos SortingBatch benthosBatch = batchTreeHelper.getBenthosVracRootBatch(vracBatch); if (speciesBatch == null) { @@ -174,19 +174,19 @@ addWarning(errors, n("tutti.persistence.batch.validation.vracSpeciesNotFound")); } } else { - // Vrac > Species > Alive not itemized + // -- Vrac > Species > Alive not itemized SortingBatch livingNotItemizedBatch = batchTreeHelper.getSpeciesVracAliveNotItemizedRootBatch(speciesBatch); if (livingNotItemizedBatch == null) { addWarning(errors, n("tutti.persistence.batch.validation.vracSpeciesLifeNotFound")); } - // Vrac > Species > Inert + // -- Vrac > Species > Inert SortingBatch inertBatch = batchTreeHelper.getSpeciesVracInertRootBatch(speciesBatch); if (inertBatch == null) { addWarning(errors, n("tutti.persistence.batch.validation.vracSpeciesInertNotFound")); } - // Vrac > Species > Alive itemized + // -- Vrac > Species > Alive itemized SortingBatch aliveItemizedBatch = batchTreeHelper.getSpeciesVracAliveItemizedRootBatch(speciesBatch); if (aliveItemizedBatch == null) { addWarning(errors, n("tutti.persistence.batch.validation.vracSpeciesAliveItemizedNotFound")); @@ -203,19 +203,19 @@ } } else { - // Vrac > Benthos > Alive not itemized + // -- Vrac > Benthos > Alive not itemized SortingBatch livingNotItemizedBatch = batchTreeHelper.getBenthosVracAliveNotItemizedRootBatch(benthosBatch); if (livingNotItemizedBatch == null) { addWarning(errors, n("tutti.persistence.batch.validation.vracBenthosLifeNotFound")); } - // Vrac > Benthos > Inert + // -- Vrac > Benthos > Inert SortingBatch inertBatch = batchTreeHelper.getBenthosVracInertRootBatch(benthosBatch); if (inertBatch == null) { addWarning(errors, n("tutti.persistence.batch.validation.vracBenthosInertNotFound")); } - // Vrac > Benthos > Alive itemized + // -- Vrac > Benthos > Alive itemized SortingBatch aliveItemizedBatch = batchTreeHelper.getBenthosVracAliveItemizedRootBatch(benthosBatch); if (aliveItemizedBatch == null) { addWarning(errors, n("tutti.persistence.batch.validation.vracBenthosAliveItemizedNotFound")); @@ -223,23 +223,23 @@ } } - // Hors Vrac + // -- Hors Vrac SortingBatch horsVracBatch = batchTreeHelper.getHorsVracBatch(batch); if (horsVracBatch == null) { addWarning(errors, n("tutti.persistence.batch.validation.horsVracNotFound")); } else { - // Hors Vrac > Species + // -- Hors Vrac > Species SortingBatch speciesBatch = batchTreeHelper.getSpeciesHorsVracRootBatch(horsVracBatch); if (speciesBatch == null) { addWarning(errors, n("tutti.persistence.batch.validation.horsVracSpeciesNotFound")); } - // Hors Vrac > Benthos + // -- Hors Vrac > Benthos SortingBatch benthosBatch = batchTreeHelper.getBenthosHorsVracRootBatch(horsVracBatch); if (benthosBatch == null) { addWarning(errors, n("tutti.persistence.batch.validation.horsVracBenthosNotFound")); } - // Hors Vrac > Marine Litter + // -- Hors Vrac > Marine Litter SortingBatch marineLitterBatch = batchTreeHelper.getMarineLitterRootBatch(horsVracBatch); if (marineLitterBatch == null) { @@ -247,7 +247,7 @@ } } - // Unsorted + // -- Unsorted SortingBatch unsortedBatch = batchTreeHelper.getRejectedBatch(batch); if (unsortedBatch == null) { addWarning(errors, n("tutti.persistence.batch.validation.unsortedNotFound")); Modified: trunk/tutti-persistence/src/main/resources/queries-failsafe.hbm.xml =================================================================== --- trunk/tutti-persistence/src/main/resources/queries-failsafe.hbm.xml 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/main/resources/queries-failsafe.hbm.xml 2014-04-22 22:43:02 UTC (rev 1722) @@ -64,7 +64,8 @@ SELECT c.id, c.name, - c.departureDateTime + c.departureDateTime, + c.synchronizationStatus AS synchronizationStatus FROM ScientificCruiseImpl c WHERE @@ -116,6 +117,7 @@ sc.vessel.code AS vesselCode, mp.id AS managerId, sc.comments AS scientificCruiseComments, + sc.synchronizationStatus AS synchronizationStatus, (SELECT sm.alphanumericalValue FROM SurveyMeasurementImpl sm WHERE sm.fishingTrip.id=ft.id AND sm.pmfm.id= :pmfmIdSurveyPart @@ -247,6 +249,7 @@ SELECT o.id AS id, o.name AS name, + o.fishingTrip.synchronizationStatus AS synchronizationStatus, o.startDateTime AS startDateTime, (select vum.alphanumericalValue from VesselUseMeasurementImpl vum where vum.vesselUseFeatures.id = vuf.id and vum.pmfm.id=:pmfmIdStationNumber) AS stationNumber, (select gum.alphanumericalValue from GearUseMeasurementImpl gum where gum.gearUseFeatures.id = guf.id and gum.pmfm.id=:pmfmIdMultirigAggregation) AS multirigAggregation @@ -309,6 +312,7 @@ <![CDATA[ SELECT o.name AS name, + max(o.fishingTrip.synchronizationStatus) AS synchronizationStatus, guf.rankOrder AS rankOrder, max(o.startDateTime) AS startDateTime, max(o.endDateTime) AS endDateTime, @@ -433,7 +437,8 @@ SELECT s.id AS id, s.referenceTaxon.id AS referenceTaxon, - s.comments AS comment + s.comments AS comment, + s.synchronizationStatus AS synchronizationStatus FROM SampleImpl s WHERE @@ -450,7 +455,8 @@ SELECT s.id AS id, s.referenceTaxon.id AS referenceTaxon, - s.comments AS comment + s.comments AS comment, + s.synchronizationStatus AS synchronizationStatus FROM SampleImpl s WHERE @@ -574,6 +580,53 @@ </query>  +  +  + + <query cacheable="true" name="updateScientificCruiseSynchronizationStatus"> + <![CDATA[ + UPDATE ScientificCruiseImpl SET synchronizationStatus=:newStatus + WHERE synchronizationStatus=:oldStatus AND id=:cruiseId + ]]> + <query-param name="cruiseId" type="java.lang.Integer"/> + <query-param name="oldStatus" type="java.lang.String"/> + <query-param name="newStatus" type="java.lang.String"/> + </query> + + <query cacheable="true" name="updateFishingTripSynchronizationStatus"> + <![CDATA[ + UPDATE FishingTripImpl SET synchronizationStatus=:newStatus + WHERE synchronizationStatus=:oldStatus AND + id IN (SELECT id FROM FishingTripImpl WHERE scientificCruise.id=:cruiseId) + ]]> + <query-param name="cruiseId" type="java.lang.Integer"/> + <query-param name="oldStatus" type="java.lang.String"/> + <query-param name="newStatus" type="java.lang.String"/> + </query> + + <query cacheable="true" name="updateCatchBatchSynchronizationStatus"> + <![CDATA[ + UPDATE CatchBatchImpl SET synchronizationStatus=:newStatus + WHERE synchronizationStatus=:oldStatus AND + id IN (SELECT id FROM CatchBatchImpl WHERE fishingOperation.fishingTrip.scientificCruise.id=:cruiseId) + ]]> + <query-param name="cruiseId" type="java.lang.Integer"/> + <query-param name="oldStatus" type="java.lang.String"/> + <query-param name="newStatus" type="java.lang.String"/> + </query> + + <query cacheable="true" name="updateSampleSynchronizationStatus"> + <![CDATA[ + UPDATE SampleImpl SET synchronizationStatus=:newStatus + WHERE synchronizationStatus=:oldStatus AND + id IN (SELECT id FROM SampleImpl WHERE fishingOperation.fishingTrip.scientificCruise.id=:cruiseId) + ]]> + <query-param name="cruiseId" type="java.lang.Integer"/> + <query-param name="oldStatus" type="java.lang.String"/> + <query-param name="newStatus" type="java.lang.String"/> + </query> + +    Modified: trunk/tutti-persistence/src/main/xmi/tutti-persistence.zargo =================================================================== (Binary files differ) Modified: trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceReadTest.java =================================================================== --- trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceReadTest.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceReadTest.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -83,7 +83,7 @@ @Test public void getRootBenthosBatch(/*String fishingOperationId*/) { //TODO Do me! - service.getRootBenthosBatch(fishingOperation.getId(), null); + service.getRootBenthosBatch(fishingOperation.getId(), false); } @Ignore @@ -164,7 +164,7 @@ public BenthosBatch getBenthosBatch(String fishingOperationId, String speciesBatchId) { - BatchContainer<BenthosBatch> rootSpeciesBatch = service.getRootBenthosBatch(fishingOperationId, null); + BatchContainer<BenthosBatch> rootSpeciesBatch = service.getRootBenthosBatch(fishingOperationId, false); return getBenthosBatch(speciesBatchId, rootSpeciesBatch.getChildren()); } Modified: trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceWriteTest.java =================================================================== --- trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceWriteTest.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/BenthosBatchPersistenceServiceWriteTest.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -326,7 +326,7 @@ // ----------------------------------------------------------------------------- // 7. Test get all root species // ----------------------------------------------------------------------------- - List<BenthosBatch> rootBenthosBatch = service.getRootBenthosBatch(fishingOperationWithEmptyBatch.getId(), null).getChildren(); + List<BenthosBatch> rootBenthosBatch = service.getRootBenthosBatch(fishingOperationWithEmptyBatch.getId(), false).getChildren(); assertNotNull(rootBenthosBatch); assertEquals(2, rootBenthosBatch.size()); assertNotNull(rootBenthosBatch.get(0).getChildBatchs()); @@ -515,7 +515,7 @@ } protected BenthosBatch getBenthosBatch(String fishingOperationId, String speciesBatchId) { - return getBenthosBatch(speciesBatchId, service.getRootBenthosBatch(fishingOperationId, null).getChildren()); + return getBenthosBatch(speciesBatchId, service.getRootBenthosBatch(fishingOperationId, false).getChildren()); } protected BenthosBatch getBenthosBatch(String speciesBatchId, List<BenthosBatch> speciesBatchs) { Modified: trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceReadTest.java =================================================================== --- trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceReadTest.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceReadTest.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -82,7 +82,7 @@ @Test public void getRootSpeciesBatch(/*String fishingOperationId*/) { //TODO Do me! - service.getRootSpeciesBatch(fishingOperation.getId(), null); + service.getRootSpeciesBatch(fishingOperation.getId(), false); } @Ignore @@ -168,7 +168,7 @@ public SpeciesBatch getSpeciesBatch(String fishingOperationId, String speciesBatchId) { - BatchContainer<SpeciesBatch> rootSpeciesBatch = service.getRootSpeciesBatch(fishingOperationId, null); + BatchContainer<SpeciesBatch> rootSpeciesBatch = service.getRootSpeciesBatch(fishingOperationId, false); return getSpeciesBatch(speciesBatchId, rootSpeciesBatch.getChildren()); } Modified: trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceWriteTest.java =================================================================== --- trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceWriteTest.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/SpeciesBatchPersistenceServiceWriteTest.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -318,7 +318,7 @@ // ----------------------------------------------------------------------------- // 7. Test get all root species // ----------------------------------------------------------------------------- - BatchContainer<SpeciesBatch> rootSpeciesBatc = service.getRootSpeciesBatch(fishingOperationWithEmptyBatch.getId(), null); + BatchContainer<SpeciesBatch> rootSpeciesBatc = service.getRootSpeciesBatch(fishingOperationWithEmptyBatch.getId(),false ); List<SpeciesBatch> rootSpeciesBatch = rootSpeciesBatc.getChildren(); assertNotNull(rootSpeciesBatch); assertEquals(2, rootSpeciesBatch.size()); @@ -507,7 +507,7 @@ } protected SpeciesBatch getSpeciesBatch(String fishingOperationId, String speciesBatchId) { - return getSpeciesBatch(speciesBatchId, service.getRootSpeciesBatch(fishingOperationId, null).getChildren()); + return getSpeciesBatch(speciesBatchId, service.getRootSpeciesBatch(fishingOperationId, false).getChildren()); } protected SpeciesBatch getSpeciesBatch(String speciesBatchId, List<SpeciesBatch> speciesBatchs) { Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/PersistenceService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/PersistenceService.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/PersistenceService.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -48,7 +48,6 @@ import fr.ifremer.tutti.persistence.entities.data.IndividualObservationBatch; import fr.ifremer.tutti.persistence.entities.data.MarineLitterBatch; import fr.ifremer.tutti.persistence.entities.data.Program; -import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; import fr.ifremer.tutti.persistence.entities.data.SpeciesAbleBatch; import fr.ifremer.tutti.persistence.entities.data.SpeciesAbleBatchFrequency; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatch; @@ -1198,9 +1197,8 @@ //------------------------------------------------------------------------// @Override - public BatchContainer<SpeciesBatch> getRootSpeciesBatch(String fishingOperationId, - SampleCategoryModel sampleCategoryModel) { - return driver.getRootSpeciesBatch(fishingOperationId, sampleCategoryModel); + public BatchContainer<SpeciesBatch> getRootSpeciesBatch(String fishingOperationId, boolean validateTree) { + return driver.getRootSpeciesBatch(fishingOperationId, validateTree); } @Override @@ -1250,8 +1248,8 @@ //------------------------------------------------------------------------// @Override - public BatchContainer<BenthosBatch> getRootBenthosBatch(String fishingOperationId, SampleCategoryModel sampleCategoryModel) throws InvalidBatchModelException { - return driver.getRootBenthosBatch(fishingOperationId, sampleCategoryModel); + public BatchContainer<BenthosBatch> getRootBenthosBatch(String fishingOperationId, boolean validateTree) throws InvalidBatchModelException { + return driver.getRootBenthosBatch(fishingOperationId, validateTree); } @Override Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/ValidateCruiseOperationsService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/ValidateCruiseOperationsService.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/ValidateCruiseOperationsService.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -26,8 +26,6 @@ import com.google.common.collect.Lists; import com.google.common.collect.Maps; -import org.nuiton.jaxx.application.ApplicationBusinessException; -import org.nuiton.jaxx.application.ApplicationTechnicalException; import fr.ifremer.tutti.persistence.InvalidBatchModelException; import fr.ifremer.tutti.persistence.ProgressionModel; import fr.ifremer.tutti.persistence.entities.data.BatchContainer; @@ -36,7 +34,6 @@ import fr.ifremer.tutti.persistence.entities.data.CatchBatch; import fr.ifremer.tutti.persistence.entities.data.FishingOperation; import fr.ifremer.tutti.persistence.entities.data.MarineLitterBatch; -import fr.ifremer.tutti.persistence.entities.data.SampleCategoryModel; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatch; import fr.ifremer.tutti.persistence.entities.data.SpeciesBatchFrequency; import fr.ifremer.tutti.persistence.entities.protocol.SpeciesProtocol; @@ -54,6 +51,8 @@ import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.nuiton.decorator.Decorator; +import org.nuiton.jaxx.application.ApplicationBusinessException; +import org.nuiton.jaxx.application.ApplicationTechnicalException; import org.nuiton.validator.NuitonValidatorResult; import org.nuiton.validator.NuitonValidatorScope; @@ -82,8 +81,6 @@ protected DecoratorService decoratorService; - protected SampleCategoryModel sampleCategoryModel; - @Override public void setServiceContext(TuttiServiceContext context) { super.setServiceContext(context); @@ -91,7 +88,6 @@ validationService = getService(ValidationService.class); weightComputingService = getService(WeightComputingService.class); decoratorService = getService(DecoratorService.class); - sampleCategoryModel = context.getSampleCategoryModel(); } /** @@ -246,7 +242,7 @@ boolean error = !isCatchBatch; if (isCatchBatch) { - rootSpeciesBatch = persistenceService.getRootSpeciesBatch(fishingOperationId, sampleCategoryModel); + rootSpeciesBatch = persistenceService.getRootSpeciesBatch(fishingOperationId, true); if (rootSpeciesBatch != null) { List<SpeciesBatch> roots = rootSpeciesBatch.getChildren(); @@ -263,13 +259,13 @@ } } if (error) { - rootSpeciesBatch = persistenceService.getRootSpeciesBatch(fishingOperationId, sampleCategoryModel); + rootSpeciesBatch = persistenceService.getRootSpeciesBatch(fishingOperationId, true); } BatchContainer<BenthosBatch> rootBenthosBatch = null; error = false; if (isCatchBatch) { - rootBenthosBatch = persistenceService.getRootBenthosBatch(fishingOperationId, sampleCategoryModel); + rootBenthosBatch = persistenceService.getRootBenthosBatch(fishingOperationId, true); if (rootBenthosBatch != null) { List<BenthosBatch> roots = rootBenthosBatch.getChildren(); @@ -286,7 +282,7 @@ } } if (error) { - rootBenthosBatch = persistenceService.getRootBenthosBatch(fishingOperationId, sampleCategoryModel); + rootBenthosBatch = persistenceService.getRootBenthosBatch(fishingOperationId, true); } BatchContainer<MarineLitterBatch> rootMarineLitterBatch; @@ -328,7 +324,8 @@ .toString(batch.getSampleCategoryValue()); warningMap.put("species", Lists.newArrayList(t("tutti.validator.warning.species.protocolNotRespected", - species, categoryValue))); + species, categoryValue)) + ); break; } } @@ -342,7 +339,8 @@ .toString(batch.getSampleCategoryValue()); warningMap.put("benthos", Lists.newArrayList(t("tutti.validator.warning.benthos.protocolNotRespected", - species, categoryValue))); + species, categoryValue)) + ); break; } } Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/WeightCleaningService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/WeightCleaningService.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/WeightCleaningService.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -222,7 +222,7 @@ BatchContainer<SpeciesBatch> speciesBatch = persistenceService.getRootSpeciesBatch( - fishingOperationId, sampleCategoryModel); + fishingOperationId, true); for (SpeciesBatch batch : speciesBatch.getChildren()) { @@ -238,7 +238,7 @@ BatchContainer<BenthosBatch> benthosBatch = persistenceService.getRootBenthosBatch( - fishingOperationId, sampleCategoryModel); + fishingOperationId, true); for (BenthosBatch batch : benthosBatch.getChildren()) { @@ -284,7 +284,7 @@ Set<SpeciesBatch> speciesToSave = Sets.newHashSet(); BatchContainer<SpeciesBatch> speciesBatch = persistenceService.getRootSpeciesBatch( - fishingOperationId, sampleCategoryModel); + fishingOperationId, true); for (SpeciesBatch batch : speciesBatch.getChildren()) { @@ -300,7 +300,7 @@ Set<BenthosBatch> benthosToSave = Sets.newHashSet(); BatchContainer<BenthosBatch> benthosBatch = persistenceService.getRootBenthosBatch( - fishingOperationId, sampleCategoryModel); + fishingOperationId, true); for (BenthosBatch batch : benthosBatch.getChildren()) { Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/WeightComputingService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/WeightComputingService.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/WeightComputingService.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -132,7 +132,7 @@ } catch (ApplicationBusinessException e) { result.put(fishingOperationId, e.getMessage()); - rootSpeciesBatch = persistenceService.getRootSpeciesBatch(fishingOperationId, null); + rootSpeciesBatch = persistenceService.getRootSpeciesBatch(fishingOperationId, false); } BatchContainer<BenthosBatch> rootBenthosBatch; @@ -141,7 +141,7 @@ } catch (ApplicationBusinessException e) { result.put(fishingOperationId, e.getMessage()); - rootBenthosBatch = persistenceService.getRootBenthosBatch(fishingOperationId, null); + rootBenthosBatch = persistenceService.getRootBenthosBatch(fishingOperationId, false); } BatchContainer<MarineLitterBatch> rootMarineLitterBatch; @@ -370,7 +370,7 @@ BatchContainer<SpeciesBatch> rootSpeciesBatch = null; if (persistenceService.isFishingOperationWithCatchBatch(operationId)) { - rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operationId, null); + rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operationId, false); currentSpeciesRowIndex = 0; if (rootSpeciesBatch != null) { @@ -563,7 +563,7 @@ BatchContainer<BenthosBatch> rootBenthosBatch = null; if (persistenceService.isFishingOperationWithCatchBatch(operationId)) { - rootBenthosBatch = persistenceService.getRootBenthosBatch(operationId, null); + rootBenthosBatch = persistenceService.getRootBenthosBatch(operationId, false); currentBenthosRowIndex = 0; if (rootBenthosBatch != null) { Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostExportService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostExportService.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostExportService.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -27,8 +27,6 @@ import com.google.common.collect.Lists; import com.google.common.collect.Maps; import com.google.common.io.Files; -import org.nuiton.jaxx.application.ApplicationIOUtil; -import org.nuiton.jaxx.application.ApplicationTechnicalException; import fr.ifremer.tutti.persistence.entities.CaracteristicMap; import fr.ifremer.tutti.persistence.entities.data.AccidentalBatch; import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; @@ -53,14 +51,16 @@ import org.apache.commons.io.IOUtils; import org.nuiton.csv.Export; import org.nuiton.csv.ExportModel; +import org.nuiton.jaxx.application.ApplicationIOUtil; +import org.nuiton.jaxx.application.ApplicationTechnicalException; import java.io.File; import java.io.Writer; import java.util.List; import java.util.Map; -import static org.nuiton.i18n.I18n.t; import static org.nuiton.i18n.I18n.n; +import static org.nuiton.i18n.I18n.t; /** * Service to export batches from a satellite post into a master post. @@ -102,8 +102,6 @@ protected char csvSeparator; - protected SampleCategoryModel sampleCategoryModel; - protected Map<String, CaracteristicQualitativeValue> sampleCategoryValueMap; @Override @@ -114,7 +112,7 @@ csvSeparator = context.getConfig().getCsvSeparator(); - sampleCategoryModel = context.getSampleCategoryModel(); + SampleCategoryModel sampleCategoryModel = context.getSampleCategoryModel(); sampleCategoryValueMap = Maps.newTreeMap(); @@ -143,7 +141,7 @@ // create rows BatchContainer<SpeciesBatch> speciesBatchContainer = - persistenceService.getRootSpeciesBatch(operationId, null); + persistenceService.getRootSpeciesBatch(operationId, false); List<CatchRow> rows = Lists.newArrayList(); List<CatchFrequencyRow> frequencyRows = Lists.newArrayList(); @@ -183,7 +181,7 @@ if (persistenceService.isFishingOperationWithCatchBatch(operationId)) { BatchContainer<BenthosBatch> benthosBatchContainer = - persistenceService.getRootBenthosBatch(operationId, null); + persistenceService.getRootBenthosBatch(operationId, false); // create rows Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostImportService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostImportService.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/catches/multipost/MultiPostImportService.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -93,9 +93,6 @@ */ public class MultiPostImportService extends AbstractTuttiService { -// private static final Log log = -// LogFactory.getLog(TuttiMultiPostImportExportService.class); - public static final String BATCHES_KEY = "batchesKey"; protected static final String ATTACHMENTS_DIRECTORY = "attachments"; @@ -184,7 +181,7 @@ final Map<String, SpeciesBatch> notImportedBatches = Maps.newLinkedHashMap(); BatchContainer<SpeciesBatch> speciesBatches = - persistenceService.getRootSpeciesBatch(operation.getId(), null); + persistenceService.getRootSpeciesBatch(operation.getId(), false); TuttiDataContext dataContext = context.getDataContext(); List<Species> speciesList = dataContext.getReferentSpecies(); @@ -453,7 +450,7 @@ final Map<String, BenthosBatch> notImportedBatches = Maps.newLinkedHashMap(); BatchContainer<BenthosBatch> benthosBatches = - persistenceService.getRootBenthosBatch(operation.getId(), null); + persistenceService.getRootBenthosBatch(operation.getId(), false); TuttiDataContext dataContext = context.getDataContext(); List<Species> speciesList = dataContext.getReferentSpecies(); Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/export/generic/TuttiExportService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/export/generic/TuttiExportService.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/export/generic/TuttiExportService.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -931,7 +931,7 @@ } catch (Exception e) { withError = true; rootSpeciesBatch = - persistenceService.getRootSpeciesBatch(operationId, null); + persistenceService.getRootSpeciesBatch(operationId, false); } try { @@ -940,7 +940,7 @@ } catch (Exception e) { withError = true; rootBenthosBatch = - persistenceService.getRootBenthosBatch(operationId, null); + persistenceService.getRootBenthosBatch(operationId, false); } try { Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/psionimport/PsionImportService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/psionimport/PsionImportService.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/psionimport/PsionImportService.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -207,7 +207,7 @@ } BatchContainer<SpeciesBatch> rootSpeciesBatch = - persistenceService.getRootSpeciesBatch(operation.getId(), null); + persistenceService.getRootSpeciesBatch(operation.getId(), false); Set<Species> alreadyUsedSpecies = Sets.newHashSet(); for (SpeciesBatch speciesBatch : rootSpeciesBatch.getChildren()) { Modified: trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriImportExportService.java =================================================================== --- trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriImportExportService.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-service/src/main/java/fr/ifremer/tutti/service/pupitri/PupitriImportExportService.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -32,8 +32,6 @@ import com.google.common.collect.Maps; import com.google.common.collect.Multimaps; import com.google.common.collect.Sets; -import org.nuiton.jaxx.application.ApplicationIOUtil; -import org.nuiton.jaxx.application.ApplicationTechnicalException; import fr.ifremer.tutti.persistence.entities.TuttiEntities; import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; @@ -63,6 +61,8 @@ import org.nuiton.csv.Export; import org.nuiton.csv.Import; import org.nuiton.decorator.Decorator; +import org.nuiton.jaxx.application.ApplicationIOUtil; +import org.nuiton.jaxx.application.ApplicationTechnicalException; import java.io.File; import java.io.IOException; @@ -74,8 +74,8 @@ import java.util.Map; import java.util.Set; +import static org.nuiton.i18n.I18n.n; import static org.nuiton.i18n.I18n.t; -import static org.nuiton.i18n.I18n.n; /** * @author kmorin <kmorin(a)codelutin.com> @@ -287,7 +287,8 @@ int end = Math.min(surveyCode.length(), 7); return surveyCode.substring(0, end); } - }) + } + ) ); speciesBySurveyCode.putAll(TuttiEntities.splitByRefTaxCode(dataContext.getReferentSpecies())); @@ -383,7 +384,7 @@ // delete all species batches - BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), null); + BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), false); for (SpeciesBatch batch : rootSpeciesBatch.getChildren()) { persistenceService.deleteSpeciesBatch(batch.getId()); } Modified: trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/catches/WeightComputingServiceTest.java =================================================================== --- trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/catches/WeightComputingServiceTest.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/catches/WeightComputingServiceTest.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -99,7 +99,7 @@ public void computeCatchWeights() { CatchBatch catchBatch = persistenceService.getCatchBatchFromFishingOperation(OPERATION_2_ID); try { - BatchContainer<SpeciesBatch> batches = persistenceService.getRootSpeciesBatch(OPERATION_2_ID, null); + BatchContainer<SpeciesBatch> batches = persistenceService.getRootSpeciesBatch(OPERATION_2_ID, false); weightComputingService.computeCatchBatchWeights(catchBatch, batches, null, null); Assert.fail(); @@ -112,7 +112,7 @@ catchBatch = persistenceService.getCatchBatchFromFishingOperation(OPERATION_3_ID); try { - BatchContainer<BenthosBatch> batches = persistenceService.getRootBenthosBatch(OPERATION_3_ID, null); + BatchContainer<BenthosBatch> batches = persistenceService.getRootBenthosBatch(OPERATION_3_ID, false); weightComputingService.computeCatchBatchWeights(catchBatch, null, batches, null); Assert.fail(); @@ -138,8 +138,8 @@ catchBatch = persistenceService.getCatchBatchFromFishingOperation(OPERATION_5_ID); try { - BatchContainer<SpeciesBatch> speciesBatches = persistenceService.getRootSpeciesBatch(OPERATION_5_ID, null); - BatchContainer<BenthosBatch> benthosBatches = persistenceService.getRootBenthosBatch(OPERATION_5_ID, null); + BatchContainer<SpeciesBatch> speciesBatches = persistenceService.getRootSpeciesBatch(OPERATION_5_ID, false); + BatchContainer<BenthosBatch> benthosBatches = persistenceService.getRootBenthosBatch(OPERATION_5_ID, false); weightComputingService.computeCatchBatchWeights(catchBatch, speciesBatches, benthosBatches, null); Assert.fail(); @@ -164,8 +164,8 @@ catchBatch = persistenceService.getCatchBatchFromFishingOperation(OPERATION_7_ID); try { - BatchContainer<SpeciesBatch> speciesBatches = persistenceService.getRootSpeciesBatch(OPERATION_7_ID, null); - BatchContainer<BenthosBatch> benthosBatches = persistenceService.getRootBenthosBatch(OPERATION_7_ID, null); + BatchContainer<SpeciesBatch> speciesBatches = persistenceService.getRootSpeciesBatch(OPERATION_7_ID, false); + BatchContainer<BenthosBatch> benthosBatches = persistenceService.getRootBenthosBatch(OPERATION_7_ID, false); weightComputingService.computeCatchBatchWeights(catchBatch, speciesBatches, benthosBatches, null); if (log.isInfoEnabled()) { log.info("Weight computing worked on operation #7"); @@ -178,7 +178,7 @@ @Test public void computeSpeciesBatch() { - BatchContainer<SpeciesBatch> speciesBatchContainer = persistenceService.getRootSpeciesBatch(OPERATION_1_ID, null); + BatchContainer<SpeciesBatch> speciesBatchContainer = persistenceService.getRootSpeciesBatch(OPERATION_1_ID, false); List<SpeciesBatch> speciesBatches = speciesBatchContainer.getChildren(); for (int i = 0; i < speciesBatches.size() - 1; i++) { try { @@ -203,7 +203,7 @@ Assert.fail(); } - BatchContainer<BenthosBatch> benthosBatchContainer = persistenceService.getRootBenthosBatch(OPERATION_1_ID, null); + BatchContainer<BenthosBatch> benthosBatchContainer = persistenceService.getRootBenthosBatch(OPERATION_1_ID, false); List<BenthosBatch> benthosBatches = benthosBatchContainer.getChildren(); for (int i = 0; i < benthosBatches.size() - 1; i++) { try { Modified: trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/psionimport/PsionImportServiceTest.java =================================================================== --- trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/psionimport/PsionImportServiceTest.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/psionimport/PsionImportServiceTest.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -110,7 +110,7 @@ CatchBatch catchBatch = persistenceService.getCatchBatchFromFishingOperation(operation.getId()); catchBatch.setFishingOperation(operation); - BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), null); + BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), false); int oldNbBatchs = rootSpeciesBatch.sizeChildren(); PsionImportResult importResult = service.importFile(importFile, operation, catchBatch); @@ -127,7 +127,7 @@ Assert.assertEquals(0, errors.size()); // no batch imported - BatchContainer<SpeciesBatch> rootSpeciesBatchAfter = persistenceService.getRootSpeciesBatch(operation.getId(), null); + BatchContainer<SpeciesBatch> rootSpeciesBatchAfter = persistenceService.getRootSpeciesBatch(operation.getId(), false); Assert.assertEquals(oldNbBatchs + 17, rootSpeciesBatchAfter.sizeChildren()); } @@ -140,7 +140,7 @@ CatchBatch catchBatch = persistenceService.getCatchBatchFromFishingOperation(operation.getId()); catchBatch.setFishingOperation(operation); - BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), null); + BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), false); int oldNbBatchs = rootSpeciesBatch.sizeChildren(); PsionImportResult importResult = service.importFile(importFile, operation, catchBatch); @@ -156,7 +156,7 @@ Assert.assertEquals(10, nbAdded); Assert.assertEquals(0, errors.size()); - BatchContainer<SpeciesBatch> rootSpeciesBatchAfter = persistenceService.getRootSpeciesBatch(operation.getId(), null); + BatchContainer<SpeciesBatch> rootSpeciesBatchAfter = persistenceService.getRootSpeciesBatch(operation.getId(), false); Assert.assertEquals(oldNbBatchs + 10, rootSpeciesBatchAfter.sizeChildren()); } @@ -169,7 +169,7 @@ CatchBatch catchBatch = persistenceService.getCatchBatchFromFishingOperation(operation.getId()); catchBatch.setFishingOperation(operation); - BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), null); + BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), false); int oldNbBatchs = rootSpeciesBatch.sizeChildren(); PsionImportResult importResult = service.importFile(importFile, operation, catchBatch); @@ -185,7 +185,7 @@ Assert.assertEquals(1, errors.size()); // no batch imported - BatchContainer<SpeciesBatch> rootSpeciesBatchAfter = persistenceService.getRootSpeciesBatch(operation.getId(), null); + BatchContainer<SpeciesBatch> rootSpeciesBatchAfter = persistenceService.getRootSpeciesBatch(operation.getId(), false); Assert.assertEquals(oldNbBatchs, rootSpeciesBatchAfter.sizeChildren()); } } Modified: trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/pupitri/PupitriImportExportServiceTest.java =================================================================== --- trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/pupitri/PupitriImportExportServiceTest.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/pupitri/PupitriImportExportServiceTest.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -100,7 +100,7 @@ CatchBatch catchBatch = persistenceService.getCatchBatchFromFishingOperation(operation.getId()); catchBatch.setFishingOperation(operation); - BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), null); + BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), false); Assert.assertEquals(3, rootSpeciesBatch.sizeChildren()); PupitriImportResult importResult = service.importPupitri(trunk, carroussel, operation, catchBatch); @@ -113,12 +113,12 @@ CatchBatch catchBatch = persistenceService.getCatchBatchFromFishingOperation(operation.getId()); catchBatch.setFishingOperation(operation); - BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), null); + BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), false); Assert.assertEquals(3, rootSpeciesBatch.sizeChildren()); PupitriImportResult importResult = service.importPupitri(trunk, carroussel, operation, catchBatch); Assert.assertTrue(importResult.isFishingOperationFound()); Assert.assertEquals(6, importResult.getNbCarrousselNotImported()); - BatchContainer<SpeciesBatch> rootSpeciesBatchAfter = persistenceService.getRootSpeciesBatch(operation.getId(), null); + BatchContainer<SpeciesBatch> rootSpeciesBatchAfter = persistenceService.getRootSpeciesBatch(operation.getId(), false); Assert.assertEquals(18, rootSpeciesBatchAfter.sizeChildren()); Decorator<Species> speciesDecorator = decoratorService.getDecoratorByType(Species.class); Modified: trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/pupitri/PupitriImportServiceTest.java =================================================================== --- trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/pupitri/PupitriImportServiceTest.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-service/src/test/java/fr/ifremer/tutti/service/pupitri/PupitriImportServiceTest.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -105,11 +105,11 @@ CatchBatch catchBatch = persistenceService.getCatchBatchFromFishingOperation(operation.getId()); catchBatch.setFishingOperation(operation); - BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), null); + BatchContainer<SpeciesBatch> rootSpeciesBatch = persistenceService.getRootSpeciesBatch(operation.getId(), false); Assert.assertEquals(3, rootSpeciesBatch.sizeChildren()); int nbNotAdded = service.importPupitri(trunk, carroussel, operation, catchBatch).getNbCarrousselNotImported(); Assert.assertEquals(0, nbNotAdded); - BatchContainer<SpeciesBatch> rootSpeciesBatchAfter = persistenceService.getRootSpeciesBatch(operation.getId(), null); + BatchContainer<SpeciesBatch> rootSpeciesBatchAfter = persistenceService.getRootSpeciesBatch(operation.getId(), false); Assert.assertEquals(31, rootSpeciesBatchAfter.sizeChildren()); Decorator<Species> speciesDecorator = decoratorService.getDecoratorByType(Species.class); Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/action/SaveCruiseAction.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/action/SaveCruiseAction.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/action/SaveCruiseAction.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -36,8 +36,11 @@ import fr.ifremer.tutti.ui.swing.content.cruise.EditCruiseUIHandler; import fr.ifremer.tutti.ui.swing.content.cruise.EditCruiseUIModel; import fr.ifremer.tutti.ui.swing.util.AbstractTuttiUIHandler; +import fr.ifremer.tutti.ui.swing.util.TuttiUIUtil; import org.apache.commons.lang3.ObjectUtils; +import javax.swing.ImageIcon; +import javax.swing.JLabel; import javax.swing.JOptionPane; import java.util.Set; @@ -168,6 +171,8 @@ for (GearWithOriginalRankOrder gear : model.getGear()) { gear.setOriginalRankOrder(gear.getRankOrder()); } + // update SynchronizationStatus + model.setSynchronizationStatus(saved.getSynchronizationStatus()); model.setModify(false); } @@ -177,5 +182,7 @@ getContext().getMainUI().getHandler().setBodyTitle( EditCruiseUIHandler.getTitle(true)); + ImageIcon icon = TuttiUIUtil.getCruiseIcon(getModel()); + getContext().getMainUI().getBody().setLeftDecoration(new JLabel(icon)); } } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/MainUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/MainUIHandler.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/MainUIHandler.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -25,8 +25,6 @@ */ import com.google.common.base.Preconditions; -import org.nuiton.jaxx.application.swing.action.ApplicationActionUI; -import org.nuiton.jaxx.application.swing.util.CloseableUI; import fr.ifremer.tutti.TuttiConfiguration; import fr.ifremer.tutti.ichtyometer.feed.FeedReader; import fr.ifremer.tutti.persistence.entities.data.Cruise; @@ -61,6 +59,8 @@ import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.nuiton.i18n.I18n; +import org.nuiton.jaxx.application.swing.action.ApplicationActionUI; +import org.nuiton.jaxx.application.swing.util.CloseableUI; import javax.swing.Icon; import javax.swing.JButton; @@ -101,9 +101,9 @@ String result; if (connected) { FeedReader ichtyometerReader = getModel().getIchtyometerReader(); - result =t("tutti.ichtyometer.status.connected.tip", ichtyometerReader.getClientName()); + result = t("tutti.ichtyometer.status.connected.tip", ichtyometerReader.getClientName()); } else { - result=t("tutti.ichtyometer.status.not.connected.tip"); + result = t("tutti.ichtyometer.status.not.connected.tip"); } return result; } @@ -421,7 +421,8 @@ screenUI = new EditCruiseUI(ui); rightDecoration = ((EditCruiseUI) screenUI).getTopToolBar(); - icon = ui.getMenuActionEditCruise().getIcon(); + Cruise cruise = context.getDataContext().getCruise(); + icon = TuttiUIUtil.getCruiseIcon(cruise == null ? ((EditCruiseUI) screenUI).getModel() : cruise); break; case EDIT_PROTOCOL: Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIHandler.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIHandler.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -26,8 +26,6 @@ import com.google.common.base.Predicate; import com.google.common.collect.Lists; -import jaxx.runtime.SwingUtil; -import org.nuiton.jaxx.application.swing.util.CloseableUI; import fr.ifremer.tutti.persistence.entities.TuttiEntities; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.Cruise; @@ -46,6 +44,7 @@ import jaxx.runtime.validator.swing.SwingValidator; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; +import org.nuiton.jaxx.application.swing.util.CloseableUI; import javax.swing.JComponent; import javax.swing.JList; @@ -106,6 +105,7 @@ getDataContext().resetValidationDataContext(); EditCruiseUIModel model = new EditCruiseUIModel(); + model.setSynchronizationStatus("DIRTY"); if (getContext().isCruiseFilled()) { Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIModel.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/cruise/EditCruiseUIModel.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -365,6 +365,18 @@ } @Override + public String getSynchronizationStatus() { + return editObject.getSynchronizationStatus(); + } + + @Override + public void setSynchronizationStatus(String synchronizationStatus) { + String oldValue = getSynchronizationStatus(); + editObject.setSynchronizationStatus(synchronizationStatus); + firePropertyChange(PROPERTY_SYNCHRONIZATION_STATUS, oldValue, synchronizationStatus); + } + + @Override public List<GearWithOriginalRankOrder> getGear() { return editObject.getGear(); } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUI.css =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUI.css 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUI.css 2014-04-22 22:43:02 UTC (rev 1722) @@ -91,7 +91,7 @@ #cruiseLabel { text: "tutti.selectCruise.field.cruise"; labelFor: {cruiseCombobox}; - actionIcon: cruise; + icon: {TuttiUIUtil.getCruiseIcon(model.getCruise())}; toolTipText: "tutti.selectCruise.field.cruise.tip"; _help: {"tutti.selectCruise.field.cruise.help"}; } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUIHandler.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/home/SelectCruiseUIHandler.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -129,10 +129,6 @@ } } else { -// TuttiProtocol selectedProtocol = null; -// if (context.isProgramFilled()) { -// selectedProtocol = getDataContext().getProtocol(); -// } model.setProtocol(getDataContext().getProtocol()); } ui.setContextValue(model); @@ -145,26 +141,14 @@ SelectCruiseUIModel model = getModel(); -// List<Program> programs = Lists.newArrayList(); -// if (model.getPrograms() != null) { -// programs.addAll(model.getPrograms()); -// } initBeanFilterableComboBox(ui.getProgramCombobox(), model.getPrograms(), model.getProgram()); -// List<Cruise> cruises = Lists.newArrayList(); -// if (model.getCruises() != null) { -// cruises.addAll(model.getCruises()); -// } initBeanFilterableComboBox(ui.getCruiseCombobox(), model.getCruises(), model.getCruise()); -// List<TuttiProtocol> protocols = Lists.newArrayList(); -// if (model.getProtocols() != null) { -// protocols.addAll(model.getProtocols()); -// } initBeanFilterableComboBox(ui.getProtocolCombobox(), model.getProtocols(), model.getProtocol()); @@ -246,7 +230,6 @@ getValidator().setBean(model); -// ui.applyDataBinding(SelectCruiseUI.BINDING_EDIT_PROGRAM_BUTTON_ENABLED); ui.applyDataBinding(SelectCruiseUI.BINDING_NEW_CRUISE_BUTTON_ENABLED); ui.applyDataBinding(SelectCruiseUI.BINDING_EDIT_CATCHES_BUTTON_ENABLED); ui.applyDataBinding(SelectCruiseUI.BINDING_VALIDATE_CATCHES_BUTTON_ENABLED); Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIModel.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/EditFishingOperationUIModel.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -1212,6 +1212,18 @@ } @Override + public String getSynchronizationStatus() { + return editObject.getSynchronizationStatus(); + } + + @Override + public void setSynchronizationStatus(String synchronizationStatus) { + String oldValue = getSynchronizationStatus(); + editObject.setSynchronizationStatus(synchronizationStatus); + firePropertyChange(PROPERTY_SYNCHRONIZATION_STATUS, oldValue, synchronizationStatus); + } + + @Override public List<Person> getRecorderPerson() { return editObject.getRecorderPerson(); } Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIModel.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/EditCatchesUIModel.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -28,8 +28,6 @@ import com.google.common.collect.HashMultimap; import com.google.common.collect.Lists; import com.google.common.collect.Multimap; -import fr.ifremer.tutti.ui.swing.util.computable.ComputableData; -import fr.ifremer.tutti.type.WeightUnit; import fr.ifremer.tutti.persistence.entities.data.AttachementObjectTypeEnum; import fr.ifremer.tutti.persistence.entities.data.Attachment; import fr.ifremer.tutti.persistence.entities.data.CatchBatch; @@ -37,10 +35,12 @@ import fr.ifremer.tutti.persistence.entities.data.FishingOperation; import fr.ifremer.tutti.persistence.entities.referential.CaracteristicQualitativeValue; import fr.ifremer.tutti.persistence.entities.referential.Species; +import fr.ifremer.tutti.type.WeightUnit; import fr.ifremer.tutti.ui.swing.util.AbstractTuttiBeanUIModel; -import org.nuiton.jaxx.application.swing.tab.TabContentModel; import fr.ifremer.tutti.ui.swing.util.attachment.AttachmentModelAware; +import fr.ifremer.tutti.ui.swing.util.computable.ComputableData; import org.apache.commons.collections.CollectionUtils; +import org.nuiton.jaxx.application.swing.tab.TabContentModel; import org.nuiton.util.beans.Binder; import org.nuiton.util.beans.BinderFactory; @@ -349,18 +349,6 @@ return null; } -// public CatchBatch getCatchBatch() { -// return editObject; -// } -// -// public void setCatchBatch(CatchBatch catchBatch) { -// Object oldValue = this.editObject; -// Object oldObjectId = getObjectId(); -// this.editObject = catchBatch; -// firePropertyChange(PROPERTY_CATCH_BATCH, oldValue, catchBatch); -// firePropertyChange(PROPERTY_OBJECT_ID, oldObjectId, getObjectId()); -// } - @Override public FishingOperation getFishingOperation() { return fishingOperation; @@ -738,34 +726,6 @@ } //------------------------------------------------------------------------// - //-- Plankton --// - //------------------------------------------------------------------------// - - @Override - public Float getPlanktonTotalWeight() { - return planktonTotalWeight; - } - - @Override - public void setPlanktonTotalWeight(Float planktonTotalWeight) { - Object oldValue = getPlanktonTotalWeight(); - this.planktonTotalWeight = planktonTotalWeight; - firePropertyChange(PROPERTY_PLANKTON_TOTAL_WEIGHT, oldValue, planktonTotalWeight); - } - - @Override - public Float getPlanktonTotalSampleWeight() { - return planktonTotalSampleWeight; - } - - @Override - public void setPlanktonTotalSampleWeight(Float planktonTotalSampleWeight) { - Object oldValue = getPlanktonTotalSampleWeight(); - this.planktonTotalSampleWeight = planktonTotalSampleWeight; - firePropertyChange(PROPERTY_PLANKTON_TOTAL_SAMPLE_WEIGHT, oldValue, planktonTotalSampleWeight); - } - - //------------------------------------------------------------------------// //-- Marine Litter --// //------------------------------------------------------------------------// @@ -840,6 +800,18 @@ firePropertyChange(PROPERTY_ATTACHMENT, null, getAttachment()); } + @Override + public String getSynchronizationStatus() { + return editObject.getSynchronizationStatus(); + } + + @Override + public void setSynchronizationStatus(String synchronizationStatus) { + String oldValue = getSynchronizationStatus(); + editObject.setSynchronizationStatus(synchronizationStatus); + firePropertyChange(PROPERTY_SYNCHRONIZATION_STATUS, oldValue, synchronizationStatus); + } + public void reset() { setSpeciesTotalInertComputedWeight(null); setSpeciesTotalLivingNotItemizedComputedWeight(null); Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/accidental/AccidentalBatchRowModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/accidental/AccidentalBatchRowModel.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/accidental/AccidentalBatchRowModel.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -242,6 +242,18 @@ return editObject.getRankOrder(); } + @Override + public String getSynchronizationStatus() { + return editObject.getSynchronizationStatus(); + } + + @Override + public void setSynchronizationStatus(String synchronizationStatus) { + String oldValue = getSynchronizationStatus(); + editObject.setSynchronizationStatus(synchronizationStatus); + firePropertyChange(PROPERTY_SYNCHRONIZATION_STATUS, oldValue, synchronizationStatus); + } + //------------------------------------------------------------------------// //-- AttachmentModelAware --// //------------------------------------------------------------------------// Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchUIHandler.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/benthos/BenthosBatchUIHandler.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -240,7 +240,7 @@ // get all batch species root (says the one with only a species sample category) BatchContainer<BenthosBatch> rootBenthosBatch = getPersistenceService().getRootBenthosBatch( - bean.getId(), sampleCategoryModel); + bean.getId(), true); List<BenthosBatch> catches = rootBenthosBatch.getChildren(); Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/individualobservation/IndividualObservationBatchRowModel.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/individualobservation/IndividualObservationBatchRowModel.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/individualobservation/IndividualObservationBatchRowModel.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -254,6 +254,18 @@ editObject.setRankOrder(rankOrder); } + @Override + public String getSynchronizationStatus() { + return editObject.getSynchronizationStatus(); + } + + @Override + public void setSynchronizationStatus(String synchronizationStatus) { + String oldValue = getSynchronizationStatus(); + editObject.setSynchronizationStatus(synchronizationStatus); + firePropertyChange(PROPERTY_SYNCHRONIZATION_STATUS, oldValue, synchronizationStatus); + } + //------------------------------------------------------------------------// //-- AttachmentModelAware --// //------------------------------------------------------------------------// Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIHandler.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIHandler.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/operation/catches/species/SpeciesBatchUIHandler.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -192,7 +192,7 @@ // get all batch species root (says the one with only a species sample category) BatchContainer<SpeciesBatch> rootSpeciesBatch = getPersistenceService().getRootSpeciesBatch( - bean.getId(), sampleCategoryModel); + bean.getId(), true); List<SpeciesBatch> catches = rootSpeciesBatch.getChildren(); Modified: trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/TuttiUIUtil.java =================================================================== --- trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/TuttiUIUtil.java 2014-04-22 21:58:53 UTC (rev 1721) +++ trunk/tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/util/TuttiUIUtil.java 2014-04-22 22:43:02 UTC (rev 1722) @@ -24,6 +24,9 @@ * #L% */ +import fr.ifremer.tutti.persistence.entities.data.Cruise; +import fr.ifremer.tutti.persistence.entities.data.Cruises; +import jaxx.runtime.SwingUtil; import org.nuiton.jaxx.application.ApplicationBusinessException; import org.nuiton.jaxx.application.swing.util.ApplicationUIUtil; import fr.ifremer.tutti.ui.swing.TuttiUIContext; @@ -33,6 +36,7 @@ import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; +import javax.swing.ImageIcon; import java.io.InputStream; import java.net.MalformedURLException; import java.net.URL; @@ -109,4 +113,18 @@ } } + public static ImageIcon getCruiseIcon(Cruise cruise) { + String iconName = "cruise"; + if (cruise != null) { + + if (Cruises.isDirty(cruise)) { + iconName = "cruise-dirty"; + } else if (Cruises.isReadyToSynch(cruise)) { + iconName = "cruise-ready-to-sync"; + } else if (Cruises.isSynch(cruise)) { + iconName = "cruise-waiting"; + } + } + return SwingUtil.createActionIcon(iconName); + } }

1 0

Build failed in Jenkins: tutti-ci #55
by admin+ci-codelutin.com＠codelutin.com 22 Apr '14

22 Apr '14

See <http://ci.codelutin.com/jenkins/job/tutti-ci/55/changes> Changes: [Tony CHEMIT] refs-60 #4979 ------------------------------------------ Started by an SCM change Building in workspace <http://ci.codelutin.com/jenkins/job/tutti-ci/ws/> Reverting <http://ci.codelutin.com/jenkins/job/tutti-ci/ws/trunk> to depth infinity with ignoreExternals: false Updating https://svn.codelutin.com/tutti/trunk at revision '2014-04-21T15:48:32.141 +0200' U tutti-service/src/test/java/fr/ifremer/tutti/service/DecoratorServiceTest.java U tutti-service/src/test/java/fr/ifremer/tutti/service/AbstractServiceTest.java U tutti-service/src/test/java/fr/ifremer/tutti/service/ValidationServiceTest.java U tutti-service/src/test/java/fr/ifremer/tutti/service/ServiceDbResource.java U tutti-service/src/main/java/fr/ifremer/tutti/service/TuttiServiceContext.java U tutti-service/src/main/java/fr/ifremer/tutti/service/export/generic/TuttiExportService.java U tutti-service/src/main/java/fr/ifremer/tutti/service/PersistenceService.java U tutti-service/src/main/java/fr/ifremer/tutti/service/referential/TuttiReferentialSynchronizeService.java U tutti-ui-swing/src/license/THIRD-PARTY.properties U tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/TuttiApplicationUpdaterCallBack.java U tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/TuttiDbUpdaterCallBack.java U tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/content/config/TuttiConfigUIHandler.java U tutti-ui-swing/src/main/java/fr/ifremer/tutti/ui/swing/TuttiUIContext.java U tutti-ui-swing/pom.xml U pom.xml U tutti-persistence/src/test/java/fr/ifremer/tutti/persistence/service/AttachmentPersistenceServiceWriteTest.java U tutti-persistence/src/test/resources/beanRefFactoryWitNoDb.xml D tutti-persistence/src/main/java/fr/ifremer/adagio U tutti-persistence/src/main/java/fr/ifremer/tutti/TuttiConfiguration.java U tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/test/DatabaseResource.java U tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceImpl.java U tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ProtocolPersistenceServiceImpl.java U tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TuttiPersistenceServiceLocator.java U tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ProtocolPersistenceService.java U tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TechnicalPersistenceServiceImpl.java U tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceServiceImpl.java U tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/FishingOperationPersistenceServiceImpl.java U tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TechnicalPersistenceService.java U tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/TuttiEnumerationFile.java U tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/ReferentialPersistenceService.java U tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/service/AbstractPersistenceService.java U tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistenceNoDbImpl.java U tutti-persistence/src/main/java/fr/ifremer/tutti/persistence/TuttiPersistence.java U tutti-persistence/src/main/java/fr/ifremer/tutti/TuttiConfigurationOption.java D tutti-persistence/src/main/resources/queries-override.hbm.xml U tutti-persistence/src/main/resources/ehcache.xml U tutti-persistence/src/main/resources/i18n/tutti-persistence_en_GB.properties U tutti-persistence/src/main/resources/i18n/tutti-persistence_fr_FR.properties AU tutti-persistence/src/main/resources/applicationContext-conf-tutti.xml U tutti-persistence/src/main/resources/tuttiBeanRefFactory.xml AU tutti-persistence/src/main/resources/queries-failsafe.hbm.xml AU tutti-persistence/src/main/resources/tutti-conf.xml U tutti-persistence/src/main/resources/applicationContext-service-tutti.xml U tutti-persistence/src/main/resources/tutti-db-enumerations.properties At revision 1718 Parsing POMs Modules changed, recalculating dependency graph [trunk] $ /opt/jdk7/bin/java -Dsettings.security=/var/local/forge/data/codelutin.com/maven/settings-security.xml -Djava.awt.headless=true -cp /var/local/forge/data/codelutin.com/jenkins/plugins/maven-plugin/WEB-INF/lib/maven31-agent-1.5.jar:/opt/maven3/boot/plexus-classworlds-2.5.1.jar:/opt/maven3/conf/logging jenkins.maven3.agent.Maven31Main /opt/maven3 /var/local/forge/exec/tomcat-codelutin.com/webapps/jenkins/WEB-INF/lib/remoting-2.36.jar /var/local/forge/data/codelutin.com/jenkins/plugins/maven-plugin/WEB-INF/lib/maven31-interceptor-1.5.jar /var/local/forge/data/codelutin.com/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.5.jar 46617 <===[JENKINS REMOTING CAPACITY]===> channel started log4j:WARN No appenders could be found for logger (org.apache.commons.beanutils.converters.BooleanConverter). log4j:WARN Please initialize the log4j system properly. Executing Maven: -B -f <http://ci.codelutin.com/jenkins/job/tutti-ci/ws/trunk/pom.xml> -s /var/local/forge/data/codelutin.com/maven/settings.xml -e -U clean verify [INFO] Error stacktraces are turned on. [INFO] Scanning for projects... [INFO] ------------------------------------------------------------------------ [INFO] Reactor Build Order: [INFO] [INFO] Tutti [INFO] Tutti :: Persistence [INFO] Tutti :: Ichtyometer API [INFO] Tutti :: Service [INFO] Tutti :: UI [INFO] [INFO] Using the builder org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder with a thread count of 1 [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Tutti 3.5-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ tutti --- [INFO] Deleting <http://ci.codelutin.com/jenkins/job/tutti-ci/ws/trunk/target> [INFO] [INFO] --- maven-enforcer-plugin:1.3.1:enforce (check-project-files) @ tutti --- [INFO] [INFO] --- maven-antrun-plugin:1.7:run (generate-surefire-workdir) @ tutti --- [INFO] Executing tasks main: [mkdir] Created dir: <http://ci.codelutin.com/jenkins/job/tutti-ci/ws/trunk/target/surefire-workd…> [INFO] Executed tasks [INFO] [INFO] --- maven-site-plugin:3.3:attach-descriptor (attach-descriptor) @ tutti --- [JENKINS] Archiving disabled [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Tutti :: Persistence 3.5-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] Downloading: http://nexus.nuiton.org/nexus/content/repositories/snapshots/fr/ifremer/ada… [INFO] Downloading: https://nexus.nuiton.org/nexus/content/groups/tutti-group/fr/ifremer/adagio… [INFO] Downloading: http://nexus.nuiton.org/nexus/content/repositories/snapshots/fr/ifremer/ada… [INFO] Downloading: https://nexus.nuiton.org/nexus/content/groups/tutti-group/fr/ifremer/adagio… [WARNING] The POM for fr.ifremer.adagio:adagio-core-shared:jar:3.5.2-SNAPSHOT is missing, no dependency information available [INFO] Downloading: http://nexus.nuiton.org/nexus/content/repositories/snapshots/fr/ifremer/ada… [INFO] Downloading: https://nexus.nuiton.org/nexus/content/groups/tutti-group/fr/ifremer/adagio… [INFO] Downloading: http://nexus.nuiton.org/nexus/content/repositories/snapshots/fr/ifremer/ada… [INFO] Downloading: https://nexus.nuiton.org/nexus/content/groups/tutti-group/fr/ifremer/adagio… [WARNING] The POM for fr.ifremer.adagio:adagio-core-allegro:jar:3.5.2-SNAPSHOT is missing, no dependency information available [INFO] Downloading: http://nexus.nuiton.org/nexus/content/repositories/central-releases/org/spr… [INFO] Downloading: https://nexus.nuiton.org/nexus/content/groups/tutti-group/org/springframewo… [INFO] Downloaded: https://nexus.nuiton.org/nexus/content/groups/tutti-group/org/springframewo… (4 KB at 86.3 KB/sec) [INFO] Downloading: http://repo.maven.apache.org/maven2/org/springframework/spring-jdbc/4.0.1.R… [INFO] Downloaded: http://repo.maven.apache.org/maven2/org/springframework/spring-jdbc/4.0.1.R… (4 KB at 1.6 KB/sec) [INFO] Downloading: http://nexus.nuiton.org/nexus/content/repositories/central-releases/org/spr… [INFO] Downloading: https://nexus.nuiton.org/nexus/content/groups/tutti-group/org/springframewo… [INFO] Downloaded: https://nexus.nuiton.org/nexus/content/groups/tutti-group/org/springframewo… (4 KB at 117.6 KB/sec) [INFO] Downloading: http://repo.maven.apache.org/maven2/org/springframework/spring-tx/4.0.1.REL… [INFO] Downloaded: http://repo.maven.apache.org/maven2/org/springframework/spring-tx/4.0.1.REL… (4 KB at 113.5 KB/sec) [INFO] Downloading: http://nexus.nuiton.org/nexus/content/repositories/central-releases/org/spr… [INFO] Downloading: https://nexus.nuiton.org/nexus/content/groups/tutti-group/org/springframewo… [INFO] Downloaded: https://nexus.nuiton.org/nexus/content/groups/tutti-group/org/springframewo… (6 KB at 233.9 KB/sec) [INFO] Downloading: http://repo.maven.apache.org/maven2/org/springframework/spring-test/4.0.1.R… [INFO] Downloaded: http://repo.maven.apache.org/maven2/org/springframework/spring-test/4.0.1.R… (6 KB at 208.8 KB/sec) [INFO] Downloading: http://nexus.nuiton.org/nexus/content/repositories/snapshots/fr/ifremer/ada… [INFO] Downloading: http://nexus.nuiton.org/nexus/content/repositories/snapshots/fr/ifremer/ada… [INFO] Downloading: https://nexus.nuiton.org/nexus/content/groups/tutti-group/fr/ifremer/adagio… [INFO] Downloading: https://nexus.nuiton.org/nexus/content/groups/tutti-group/fr/ifremer/adagio… [INFO] Downloading: http://nexus.nuiton.org/nexus/content/repositories/central-releases/org/spr… [INFO] Downloading: http://nexus.nuiton.org/nexus/content/repositories/central-releases/org/spr… [INFO] Downloading: http://nexus.nuiton.org/nexus/content/repositories/central-releases/org/spr… [INFO] Downloading: https://nexus.nuiton.org/nexus/content/groups/tutti-group/org/springframewo… [INFO] Downloading: https://nexus.nuiton.org/nexus/content/groups/tutti-group/org/springframewo… [INFO] Downloading: https://nexus.nuiton.org/nexus/content/groups/tutti-group/org/springframewo… [INFO] Downloaded: https://nexus.nuiton.org/nexus/content/groups/tutti-group/org/springframewo… (243 KB at 1939.1 KB/sec) [INFO] Downloaded: https://nexus.nuiton.org/nexus/content/groups/tutti-group/org/springframewo… (432 KB at 3272.1 KB/sec) [INFO] Downloaded: https://nexus.nuiton.org/nexus/content/groups/tutti-group/org/springframewo… (410 KB at 3011.9 KB/sec) [INFO] Downloading: http://repo.maven.apache.org/maven2/org/springframework/spring-jdbc/4.0.1.R… [INFO] Downloading: http://repo.maven.apache.org/maven2/org/springframework/spring-tx/4.0.1.REL… [INFO] Downloading: http://repo.maven.apache.org/maven2/org/springframework/spring-test/4.0.1.R… [INFO] Downloaded: http://repo.maven.apache.org/maven2/org/springframework/spring-jdbc/4.0.1.R… (410 KB at 3126.8 KB/sec) [INFO] Downloaded: http://repo.maven.apache.org/maven2/org/springframework/spring-tx/4.0.1.REL… (243 KB at 1836.2 KB/sec) [INFO] Downloaded: http://repo.maven.apache.org/maven2/org/springframework/spring-test/4.0.1.R… (432 KB at 3152.7 KB/sec) [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary: [INFO] [INFO] Tutti ............................................. SUCCESS [ 2.644 s] [INFO] Tutti :: Persistence .............................. FAILURE [ 3.497 s] [INFO] Tutti :: Ichtyometer API .......................... SKIPPED [INFO] Tutti :: Service .................................. SKIPPED [INFO] Tutti :: UI ....................................... SKIPPED [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 7.248 s [INFO] Finished at: 2014-04-21T15:48:46+01:00 [INFO] Final Memory: 22M/309M [INFO] ------------------------------------------------------------------------ [ERROR] Failed to execute goal on project tutti-persistence: Could not resolve dependencies for project fr.ifremer.tutti:tutti-persistence:jar:3.5-SNAPSHOT: The following artifacts could not be resolved: fr.ifremer.adagio:adagio-core-shared:jar:3.5.2-SNAPSHOT, fr.ifremer.adagio:adagio-core-allegro:jar:3.5.2-SNAPSHOT: Could not find artifact fr.ifremer.adagio:adagio-core-shared:jar:3.5.2-SNAPSHOT in snapshots (http://nexus.nuiton.org/nexus/content/repositories/snapshots) -> [Help 1] org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal on project tutti-persistence: Could not resolve dependencies for project fr.ifremer.tutti:tutti-persistence:jar:3.5-SNAPSHOT: The following artifacts could not be resolved: fr.ifremer.adagio:adagio-core-shared:jar:3.5.2-SNAPSHOT, fr.ifremer.adagio:adagio-core-allegro:jar:3.5.2-SNAPSHOT: Could not find artifact fr.ifremer.adagio:adagio-core-shared:jar:3.5.2-SNAPSHOT in snapshots (http://nexus.nuiton.org/nexus/content/repositories/snapshots) at org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.getDependencies(LifecycleDependencyResolver.java:220) at org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.resolveProjectDependencies(LifecycleDependencyResolver.java:127) at org.apache.maven.lifecycle.internal.MojoExecutor.ensureDependenciesAreResolved(MojoExecutor.java:257) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:200) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:108) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:76) at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:116) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:361) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:155) at org.jvnet.hudson.maven3.launcher.Maven31Launcher.main(Maven31Launcher.java:132) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:606) at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:330) at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:238) at jenkins.maven3.agent.Maven31Main.launch(Maven31Main.java:181) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:606) at hudson.maven.Maven3Builder.call(Maven3Builder.java:134) at hudson.maven.Maven3Builder.call(Maven3Builder.java:69) at hudson.remoting.UserRequest.perform(UserRequest.java:118) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:328) at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72) at java.util.concurrent.FutureTask.run(FutureTask.java:262) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) at java.lang.Thread.run(Thread.java:745) Caused by: org.apache.maven.project.DependencyResolutionException: Could not resolve dependencies for project fr.ifremer.tutti:tutti-persistence:jar:3.5-SNAPSHOT: The following artifacts could not be resolved: fr.ifremer.adagio:adagio-core-shared:jar:3.5.2-SNAPSHOT, fr.ifremer.adagio:adagio-core-allegro:jar:3.5.2-SNAPSHOT: Could not find artifact fr.ifremer.adagio:adagio-core-shared:jar:3.5.2-SNAPSHOT in snapshots (http://nexus.nuiton.org/nexus/content/repositories/snapshots) at org.apache.maven.project.DefaultProjectDependenciesResolver.resolve(DefaultProjectDependenciesResolver.java:198) at org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.getDependencies(LifecycleDependencyResolver.java:195) ... 33 more Caused by: org.eclipse.aether.resolution.DependencyResolutionException: The following artifacts could not be resolved: fr.ifremer.adagio:adagio-core-shared:jar:3.5.2-SNAPSHOT, fr.ifremer.adagio:adagio-core-allegro:jar:3.5.2-SNAPSHOT: Could not find artifact fr.ifremer.adagio:adagio-core-shared:jar:3.5.2-SNAPSHOT in snapshots (http://nexus.nuiton.org/nexus/content/repositories/snapshots) at org.eclipse.aether.internal.impl.DefaultRepositorySystem.resolveDependencies(DefaultRepositorySystem.java:384) at org.apache.maven.project.DefaultProjectDependenciesResolver.resolve(DefaultProjectDependenciesResolver.java:192) ... 34 more Caused by: org.eclipse.aether.resolution.ArtifactResolutionException: The following artifacts could not be resolved: fr.ifremer.adagio:adagio-core-shared:jar:3.5.2-SNAPSHOT, fr.ifremer.adagio:adagio-core-allegro:jar:3.5.2-SNAPSHOT: Could not find artifact fr.ifremer.adagio:adagio-core-shared:jar:3.5.2-SNAPSHOT in snapshots (http://nexus.nuiton.org/nexus/content/repositories/snapshots) at org.eclipse.aether.internal.impl.DefaultArtifactResolver.resolve(DefaultArtifactResolver.java:459) at org.eclipse.aether.internal.impl.DefaultArtifactResolver.resolveArtifacts(DefaultArtifactResolver.java:262) at org.eclipse.aether.internal.impl.DefaultRepositorySystem.resolveDependencies(DefaultRepositorySystem.java:367) ... 35 more Caused by: org.eclipse.aether.transfer.ArtifactNotFoundException: Could not find artifact fr.ifremer.adagio:adagio-core-shared:jar:3.5.2-SNAPSHOT in snapshots (http://nexus.nuiton.org/nexus/content/repositories/snapshots) at org.eclipse.aether.connector.wagon.WagonRepositoryConnector$6.wrap(WagonRepositoryConnector.java:1012) at org.eclipse.aether.connector.wagon.WagonRepositoryConnector$6.wrap(WagonRepositoryConnector.java:1004) at org.eclipse.aether.connector.wagon.WagonRepositoryConnector$GetTask.run(WagonRepositoryConnector.java:725) at org.eclipse.aether.util.concurrency.RunnableErrorForwarder$1.run(RunnableErrorForwarder.java:67) ... 3 more [ERROR] [ERROR] Re-run Maven using the -X switch to enable full debug logging. [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/DependencyResolutionExcept… [ERROR] [ERROR] After correcting the problems, you can resume the build with the command [ERROR] mvn <goals> -rf :tutti-persistence Sending e-mails to: tutti-commits(a)list.forge.codelutin.com chemit+codelutin-ci(a)codelutin.com channel stopped

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Build failed in Jenkins: tutti-ci » Tutti :: Persistence #55
by admin+ci-codelutin.com＠codelutin.com 22 Apr '14

22 Apr '14

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